FFCP PHASE2:Hg19::chr8:145065457..145065489,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2907 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:4589 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2907 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=4589 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 00:17, 17 September 2015
| Short description: | p6@GRINA |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_GRINA_5end |
| Coexpression cluster: | C2920_liver_Mesenchymal_Neutrophils_Osteoblast_Melanocyte_testis_CD14 |
| Association with transcript: | 0bp_to_ENST00000531992_5end |
| EntrezGene: | GRINA |
| HGNC: | 4589 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@GRINA |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 1.93e-13 | 48 |
| phagocyte | 1.93e-13 | 48 |
| myeloid leukocyte | 5.67e-13 | 72 |
| classical monocyte | 3.34e-12 | 42 |
| CD14-positive, CD16-negative classical monocyte | 3.34e-12 | 42 |
| monopoietic cell | 5.35e-11 | 59 |
| monocyte | 5.35e-11 | 59 |
| monoblast | 5.35e-11 | 59 |
| promonocyte | 5.35e-11 | 59 |
| macrophage dendritic cell progenitor | 2.73e-10 | 61 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| mesoderm | 6.12e-12 | 315 |
| mesoderm-derived structure | 6.12e-12 | 315 |
| presumptive mesoderm | 6.12e-12 | 315 |
| germ layer | 3.56e-11 | 560 |
| germ layer / neural crest | 3.56e-11 | 560 |
| embryonic tissue | 3.56e-11 | 560 |
| presumptive structure | 3.56e-11 | 560 |
| germ layer / neural crest derived structure | 3.56e-11 | 560 |
| epiblast (generic) | 3.56e-11 | 560 |
| embryonic structure | 8.43e-11 | 564 |
Showing 1 to 10 of 22 entries
