FFCP PHASE2:Hg19::chr6:31554612..31554629,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7940 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:14189 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7940 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=14189 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5STB1 | ||
|association_with_transcript=0bp_to_ENST00000211921,uc003nuq.2_5end | |association_with_transcript=0bp_to_ENST00000211921,uc003nuq.2_5end | ||
|cluster_id=chr6:31554612..31554629,+ | |cluster_id=chr6:31554612..31554629,+ |
Latest revision as of 22:01, 17 September 2015
Short description: | p10@LST1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LST1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000211921, uc003nuq.2_5end |
EntrezGene: | LST1 |
HGNC: | 14189 |
UniProt: | Q5STB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p10@LST1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.74e-48 | 168 |
hematopoietic cell | 3.65e-45 | 177 |
hematopoietic oligopotent progenitor cell | 9.61e-39 | 161 |
hematopoietic multipotent progenitor cell | 9.61e-39 | 161 |
leukocyte | 1.53e-33 | 136 |
myeloid cell | 1.58e-31 | 108 |
common myeloid progenitor | 1.58e-31 | 108 |
nongranular leukocyte | 5.16e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 1.33e-20 | 120 |
myeloid leukocyte | 5.73e-18 | 72 |
Showing 1 to 10 of 46 entries
Ontology term | p-value | n |
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hematopoietic system | 6.85e-26 | 98 |
blood island | 6.85e-26 | 98 |
hemolymphoid system | 1.62e-22 | 108 |
immune system | 1.00e-13 | 93 |
blood | 4.72e-13 | 15 |
haemolymphatic fluid | 4.72e-13 | 15 |
organism substance | 4.72e-13 | 15 |
bone marrow | 7.83e-13 | 76 |
connective tissue | 7.96e-13 | 371 |
bone element | 1.97e-11 | 82 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
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myeloid leukemia | 2.47e-19 | 31 |
leukemia | 1.75e-16 | 39 |
hematologic cancer | 4.78e-13 | 51 |
immune system cancer | 4.78e-13 | 51 |
Showing 1 to 4 of 4 entries