FFCP PHASE1:Hg19::chr4:53617723..53617731,-: Difference between revisions
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|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=42970 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 00:03, 18 September 2015
Short description: | p5@ERVMER34-1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ERVMER34-1_5end |
Coexpression cluster: | C1586_choriocarcinoma_serous_maxillary_colon_small_Prostate_H9 |
Association with transcript: | 21bp_to_ENST00000454756_5end |
EntrezGene: | NA |
HGNC: | 42970 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@ERVMER34-1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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serous secreting cell | 2.42e-50 | 1 |
germ line cell | 3.16e-29 | 7 |
germ cell | 3.16e-29 | 7 |
seromucus secreting cell | 5.56e-26 | 2 |
epithelial cell of large intestine | 9.18e-26 | 2 |
intestinal epithelial cell | 1.29e-13 | 4 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 2.42e-50 | 1 |
epithelium of gonad | 5.56e-26 | 2 |
rectum | 1.29e-13 | 4 |
intestinal mucosa | 1.29e-13 | 4 |
wall of intestine | 1.29e-13 | 4 |
gastrointestinal system mucosa | 1.29e-13 | 4 |
gastrointestinal system epithelium | 1.29e-13 | 4 |
intestinal epithelium | 1.29e-13 | 4 |
lower digestive tract | 3.60e-11 | 5 |
epithelium of mucosa | 1.80e-07 | 8 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.42e-50 | 1 |
germ cell and embryonal cancer | 4.33e-10 | 22 |
germ cell cancer | 4.33e-10 | 22 |
adenocarcinoma | 5.71e-09 | 25 |
Showing 1 to 4 of 4 entries