FFCP PHASE2:Hg19::chr3:50306572..50306675,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7869 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA |HGNC=HGNC:10724 |TSSclassifier=st...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7869 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC= | |HGNC=10724 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F5H6N7 | ||
|association_with_transcript=0bp_to_ENST00000414456,ENST00000426144,ENST00000454314,uc010hli.2_5end | |association_with_transcript=0bp_to_ENST00000414456,ENST00000426144,ENST00000454314,uc010hli.2_5end | ||
|cluster_id=chr3:50306572..50306675,+ | |cluster_id=chr3:50306572..50306675,+ |
Latest revision as of 19:20, 18 September 2015
Short description: | p1@SEMA3B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEMA3B_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000414456, ENST00000426144, ENST00000454314, uc010hli.2_5end |
EntrezGene: | SEMA3B |
HGNC: | 10724 |
UniProt: | F5H6N7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@SEMA3B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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endoderm-derived structure | 2.09e-18 | 160 |
endoderm | 2.09e-18 | 160 |
presumptive endoderm | 2.09e-18 | 160 |
digestive system | 7.47e-16 | 145 |
digestive tract | 7.47e-16 | 145 |
primitive gut | 7.47e-16 | 145 |
organ system subdivision | 1.13e-13 | 223 |
subdivision of digestive tract | 1.10e-11 | 118 |
adult organism | 1.25e-07 | 114 |
renal system | 1.29e-07 | 48 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
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carcinoma | 8.75e-13 | 106 |
cell type cancer | 6.85e-08 | 143 |
adenocarcinoma | 8.59e-07 | 25 |
Showing 1 to 3 of 3 entries