FFCP PHASE2:Hg19::chr2:105470536..105470556,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5455 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding |HGNC=NA |TSSclassifier=strong |Uni...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5455 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | ||
|HGNC=NA | |HGNC=NA |
Latest revision as of 04:03, 16 September 2015
Short description: | p4@POU3F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_POU3F3_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | NA |
EntrezGene: | POU3F3 |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@POU3F3 |
---|
0
25
50
75
100
125
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.45e-11 | 10 |
nephron tubule epithelial cell | 1.45e-11 | 10 |
oligodendrocyte | 9.55e-10 | 7 |
macroglial cell | 9.55e-10 | 7 |
astrocyte | 9.55e-10 | 7 |
oligodendrocyte precursor cell | 9.55e-10 | 7 |
neural cell | 2.34e-09 | 25 |
kidney cell | 3.56e-09 | 17 |
kidney epithelial cell | 3.56e-09 | 17 |
epithelial cell of nephron | 4.03e-07 | 15 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
neural tube | 5.34e-84 | 56 |
neural rod | 5.34e-84 | 56 |
future spinal cord | 5.34e-84 | 56 |
neural keel | 5.34e-84 | 56 |
central nervous system | 4.69e-81 | 81 |
regional part of nervous system | 9.06e-79 | 53 |
regional part of brain | 9.06e-79 | 53 |
nervous system | 4.53e-76 | 89 |
brain | 1.43e-67 | 68 |
future brain | 1.43e-67 | 68 |
Showing 1 to 10 of 85 entries