FFCP PHASE2:Hg19::chr19:51052115..51052142,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:94030 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding |HGNC=HGNC:25042 |TSSclassifier=stron...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=94030 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | ||
|HGNC= | |HGNC=25042 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=A0PJJ4 | ||
|association_with_transcript=-8bp_to_BC032460_5end | |association_with_transcript=-8bp_to_BC032460_5end | ||
|cluster_id=chr19:51052115..51052142,- | |cluster_id=chr19:51052115..51052142,- |
Latest revision as of 12:12, 19 September 2015
Short description: | p3@LRRC4B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC4B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -8bp_to_BC032460_5end |
EntrezGene: | LRRC4B |
HGNC: | 25042 |
UniProt: | A0PJJ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@LRRC4B |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.25e-107 | 56 |
neural rod | 1.25e-107 | 56 |
future spinal cord | 1.25e-107 | 56 |
neural keel | 1.25e-107 | 56 |
regional part of nervous system | 2.58e-107 | 53 |
regional part of brain | 2.58e-107 | 53 |
regional part of forebrain | 1.50e-94 | 41 |
forebrain | 1.50e-94 | 41 |
anterior neural tube | 1.50e-94 | 41 |
future forebrain | 1.50e-94 | 41 |
Showing 1 to 10 of 99 entries