FFCP PHASE2:Hg19::chr18:52495804..52495818,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:5874 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:9767 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=5874 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=9767 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 20:16, 19 September 2015
Short description: | p2@RAB27B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB27B_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | -21bp_to_uc002lfr.2_5end |
EntrezGene: | RAB27B |
HGNC: | 9767 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@RAB27B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mast cell | 5.54e-12 | 5 |
basophil mast progenitor cell | 5.54e-12 | 5 |
cardiac mesenchymal cell | 6.05e-09 | 4 |
migratory trunk neural crest cell | 6.05e-09 | 4 |
vascular associated smooth muscle cell | 5.68e-07 | 32 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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female gonad | 7.66e-13 | 13 |
right ovary | 1.20e-11 | 5 |
left ovary | 1.35e-09 | 4 |
blood | 6.79e-08 | 15 |
haemolymphatic fluid | 6.79e-08 | 15 |
organism substance | 6.79e-08 | 15 |
female organism | 2.42e-07 | 41 |
female reproductive organ | 3.13e-07 | 37 |
female reproductive system | 3.13e-07 | 37 |
gonad | 3.81e-07 | 21 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.80e-21 | 14 |
female reproductive organ cancer | 7.72e-11 | 27 |
reproductive organ cancer | 7.43e-10 | 29 |
cell type benign neoplasm | 1.10e-07 | 3 |
leiomyoma | 1.10e-07 | 3 |
Showing 1 to 5 of 5 entries