FFCP PHASE1:Hg19::chr15:77907614..77907624,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=84894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=21205 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96FE5 | ||
|association_with_transcript=170bp_to_AY324322_5end | |association_with_transcript=170bp_to_AY324322_5end | ||
|cluster_id=chr15:77907614..77907624,- | |cluster_id=chr15:77907614..77907624,- | ||
Latest revision as of 05:38, 19 September 2015
| Short description: | p17@LINGO1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_17_at_LINGO1_5end |
| Coexpression cluster: | C2350_medial_brain_amygdala_hippocampus_neuroectodermal_occipital_small |
| Association with transcript: | 170bp_to_AY324322_5end |
| EntrezGene: | LINGO1 |
| HGNC: | 21205 |
| UniProt: | Q96FE5 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p17@LINGO1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| Merkel cell | 2.99e-10 | 2 |
| light melanocyte | 2.47e-07 | 3 |
Showing 1 to 2 of 2 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of cerebral cortex | 6.11e-13 | 22 |
| cerebral cortex | 1.73e-11 | 25 |
| pallium | 1.73e-11 | 25 |
| temporal lobe | 2.55e-11 | 6 |
| middle temporal gyrus | 1.43e-10 | 2 |
| Ammon's horn | 1.89e-10 | 2 |
| lobe parts of cerebral cortex | 1.89e-10 | 2 |
| hippocampal formation | 1.89e-10 | 2 |
| limbic lobe | 1.89e-10 | 2 |
| brain | 3.55e-09 | 68 |
Showing 1 to 10 of 30 entries
