FFCP PHASE2:Hg19::chr15:39886511..39886611,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:7057 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:11785 |TSSclas...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=7057 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=11785 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 11:26, 17 September 2015
Short description: | p12@THBS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_THBS1_5end |
Coexpression cluster: | C142_Preadipocyte_Fibroblast_hepatic_Ewing_Adipocyte_Olfactory_Hair |
Association with transcript: | 242bp_to_ENST00000559746_5end |
EntrezGene: | THBS1 |
HGNC: | 11785 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p12@THBS1 |
---|
0
10
20
30
40
50
60
70
80
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.84e-17 | 76 |
endothelial cell of vascular tree | 2.58e-14 | 24 |
mesodermal cell | 6.86e-12 | 121 |
endothelial cell | 8.68e-12 | 36 |
blood vessel endothelial cell | 1.40e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.40e-10 | 18 |
meso-epithelial cell | 7.48e-10 | 45 |
somatic stem cell | 2.54e-09 | 433 |
embryonic cell | 4.05e-09 | 250 |
multi fate stem cell | 8.62e-09 | 427 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
vessel | 4.30e-18 | 68 |
splanchnic layer of lateral plate mesoderm | 8.99e-17 | 83 |
vasculature | 1.27e-16 | 78 |
vascular system | 1.27e-16 | 78 |
epithelial tube open at both ends | 1.86e-16 | 59 |
blood vessel | 1.86e-16 | 59 |
blood vasculature | 1.86e-16 | 59 |
vascular cord | 1.86e-16 | 59 |
epithelial tube | 1.49e-12 | 117 |
artery | 3.50e-12 | 42 |
Showing 1 to 10 of 32 entries