FFCP PHASE2:Hg19::chr12:16500545..16500556,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4257 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7061 |TSSclass...") |
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| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4257 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7061 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F5H760,P10620 | ||
|association_with_transcript=-22bp_to_ENST00000534835,ENST00000543076,NM_020300,uc001rdg.2,uc009zih.1_5end | |association_with_transcript=-22bp_to_ENST00000534835,ENST00000543076,NM_020300,uc001rdg.2,uc009zih.1_5end | ||
|cluster_id=chr12:16500545..16500556,+ | |cluster_id=chr12:16500545..16500556,+ | ||
Latest revision as of 15:51, 17 September 2015
| Short description: | p3@MGST1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_MGST1_5end |
| Coexpression cluster: | C892_mature_Adipocyte_liver_Hepatocyte_bile_lung_gall |
| Association with transcript: | -22bp_to_ENST00000534835, ENST00000543076, NM_020300, uc001rdg.2, uc009zih.1_5end |
| EntrezGene: | MGST1 |
| HGNC: | 7061 |
| UniProt: | F5H760P10620 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@MGST1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| fat cell | 1.66e-10 | 15 |
| muscle precursor cell | 1.42e-08 | 58 |
| myoblast | 1.42e-08 | 58 |
| multi-potent skeletal muscle stem cell | 1.42e-08 | 58 |
| muscle cell | 9.89e-08 | 55 |
| fibroblast | 3.95e-07 | 76 |
| electrically responsive cell | 5.46e-07 | 61 |
| electrically active cell | 5.46e-07 | 61 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| cell layer | 1.10e-13 | 309 |
| epithelium | 1.58e-13 | 306 |
| trunk | 8.52e-12 | 199 |
| trunk mesenchyme | 7.17e-11 | 122 |
| mesenchyme | 3.61e-10 | 160 |
| entire embryonic mesenchyme | 3.61e-10 | 160 |
| unilaminar epithelium | 5.73e-10 | 148 |
| embryo | 5.26e-09 | 592 |
| primordium | 5.54e-09 | 160 |
| multilaminar epithelium | 3.51e-08 | 83 |
Showing 1 to 10 of 37 entries
