UBERON:0007914: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=head or neck bone | |name=head or neck bone | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0007811 | |part_of=UBERON:0007811 | ||
Latest revision as of 18:03, 12 September 2014
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001474(bone element) |
|---|---|
| part_of: | UBERON:0007811(craniocervical region) |
Children
| is a: | UBERON:0003457 (head bone) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007914 (head or neck bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81b | p14@C17orf67 |
| 5.42e-195 | FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_570e3aab45d7e47547f628ed89e9d81b | p14@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6 | p11@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_9012a5a077064ebfd5b6e162ce136ea6 | p12@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_9012a5a077064ebfd5b6e162ce136ea6 | p@chr8:57353655..57353662, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_9012a5a077064ebfd5b6e162ce136ea6 | p13@C17orf67 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_9012a5a077064ebfd5b6e162ce136ea6 | p11@C17orf67 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_c7b014f591b3f452f653d0547dd682df | p21@Espn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_c7b014f591b3f452f653d0547dd682df | p1@Kncn |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_c7b014f591b3f452f653d0547dd682df | p1@Espnl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_c7b014f591b3f452f653d0547dd682df | p@chr14:47293487..47293493, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_c7b014f591b3f452f653d0547dd682df | p2@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_c7b014f591b3f452f653d0547dd682df | p18@Trpm3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_c7b014f591b3f452f653d0547dd682df | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_c7b014f591b3f452f653d0547dd682df | p@chr13:78257491..78257498, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_c7b014f591b3f452f653d0547dd682df | p@chr3:31585340..31585360, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_c7b014f591b3f452f653d0547dd682df | p6@Jag1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_c7b014f591b3f452f653d0547dd682df | p@chr2:128881546..128881553, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_c7b014f591b3f452f653d0547dd682df | p@chr18:38104702..38104718, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_c7b014f591b3f452f653d0547dd682df | p@chr11:94371127..94371139, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_c7b014f591b3f452f653d0547dd682df | p@chr12:13508046..13508055, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_c7b014f591b3f452f653d0547dd682df | p@chr5:150945209..150945220, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_c7b014f591b3f452f653d0547dd682df | p@chr6:113251570..113251578, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_c7b014f591b3f452f653d0547dd682df | p2@9230102O04Rik |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_c7b014f591b3f452f653d0547dd682df | p@chr3:154693281..154693317, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_c7b014f591b3f452f653d0547dd682df | p10@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_c7b014f591b3f452f653d0547dd682df | p@chr8:13414289..13414295, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:65641741..65641748, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_c7b014f591b3f452f653d0547dd682df | p@chr13:78257491..78257498, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_c7b014f591b3f452f653d0547dd682df | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:63079735..63079745,-#_c7b014f591b3f452f653d0547dd682df | p@chr4:63079735..63079745, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_c7b014f591b3f452f653d0547dd682df | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_c7b014f591b3f452f653d0547dd682df | p3@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_c7b014f591b3f452f653d0547dd682df | p@chr7:139597684..139597691, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_c7b014f591b3f452f653d0547dd682df | p3@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_c7b014f591b3f452f653d0547dd682df | p4@Gipc3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_c7b014f591b3f452f653d0547dd682df | p2@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_c7b014f591b3f452f653d0547dd682df | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_c7b014f591b3f452f653d0547dd682df | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_c7b014f591b3f452f653d0547dd682df | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:58480061..58480066,+#_c7b014f591b3f452f653d0547dd682df | p5@Fer1l6 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_c7b014f591b3f452f653d0547dd682df | p7@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_c7b014f591b3f452f653d0547dd682df | p2@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:53464168..53464175,+#_c7b014f591b3f452f653d0547dd682df | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_c7b014f591b3f452f653d0547dd682df | p@chr5:72652660..72652667, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_c7b014f591b3f452f653d0547dd682df | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_c7b014f591b3f452f653d0547dd682df | p@chr16:93971367..93971379, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_c7b014f591b3f452f653d0547dd682df | p6@Jag1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_c7b014f591b3f452f653d0547dd682df | p1@Otog |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_c7b014f591b3f452f653d0547dd682df | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_c7b014f591b3f452f653d0547dd682df | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:114603036..114603048,+#_c7b014f591b3f452f653d0547dd682df | p@chr11:114603036..114603048, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_c7b014f591b3f452f653d0547dd682df | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:89215333..89215341, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:154246932..154246939,+#_c7b014f591b3f452f653d0547dd682df | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:172843813..172843834, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_c7b014f591b3f452f653d0547dd682df | p6@Fam70b |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:121206667..121206674,-#_c7b014f591b3f452f653d0547dd682df | p2@Strc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_c7b014f591b3f452f653d0547dd682df | p9@Ankrd24 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_c7b014f591b3f452f653d0547dd682df | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_c7b014f591b3f452f653d0547dd682df | p1@Otog |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_c7b014f591b3f452f653d0547dd682df | p@chr5:3909310..3909321, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_c7b014f591b3f452f653d0547dd682df | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_c7b014f591b3f452f653d0547dd682df | p@chr3:154459231..154459240, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_c7b014f591b3f452f653d0547dd682df | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_c7b014f591b3f452f653d0547dd682df | p7@Glt25d2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_c7b014f591b3f452f653d0547dd682df | p2@Gpr152 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_c7b014f591b3f452f653d0547dd682df | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:194818647..194818660, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_c7b014f591b3f452f653d0547dd682df | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_c7b014f591b3f452f653d0547dd682df | p6@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_c7b014f591b3f452f653d0547dd682df | p2@Gm1322 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_c7b014f591b3f452f653d0547dd682df | p5@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_c7b014f591b3f452f653d0547dd682df | p3@Fanca |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_c7b014f591b3f452f653d0547dd682df | p3@Strc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_c7b014f591b3f452f653d0547dd682df | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_c7b014f591b3f452f653d0547dd682df | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_c7b014f591b3f452f653d0547dd682df | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42207397..42207408, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_c7b014f591b3f452f653d0547dd682df | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_c7b014f591b3f452f653d0547dd682df | p2@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_c7b014f591b3f452f653d0547dd682df | p2@Slc26a5 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_c7b014f591b3f452f653d0547dd682df | p@chr13:43699188..43699216, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_c7b014f591b3f452f653d0547dd682df | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_c7b014f591b3f452f653d0547dd682df | p1@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_c7b014f591b3f452f653d0547dd682df | p4@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_c7b014f591b3f452f653d0547dd682df | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_c7b014f591b3f452f653d0547dd682df | p@chr3:81012915..81012923, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_c7b014f591b3f452f653d0547dd682df | p4@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_c7b014f591b3f452f653d0547dd682df | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_c7b014f591b3f452f653d0547dd682df | p@chr1:93235228..93235249, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_c7b014f591b3f452f653d0547dd682df | p@chr15:12848147..12848162, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_c7b014f591b3f452f653d0547dd682df | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_c7b014f591b3f452f653d0547dd682df | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_c7b014f591b3f452f653d0547dd682df | p1@Espnl |
