UBERON:0005882: Difference between revisions
From FANTOM5_SSTAR
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|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=alar plate | |name=neural tube alar plate | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0004061 | |part_of=UBERON:0004061 | ||
Latest revision as of 17:55, 12 September 2014
| Name: | neural tube alar plate | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "the mantle layer of the neural tube that lies dorsal to the sulcus limitans and contains primarily sensory neurons and interneurons involved in communication of sensory impulses." [MP:0009692, Wikipedia:Alar_plate] | ||
| Xrefs: |
| ||
| Synonyms: |
"alar lamina" RELATED [Wikipedia:Alar_lamina] "lamina alaris" RELATED [Wikipedia:Alar_lamina] "lamina dorsolateralis" RELATED [Wikipedia:Alar_lamina] "lamina dorsolateralis; lamina alaris" RELATED LATIN [Wikipedia:Alar_plate] |
Gray646.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| part_of: | UBERON:0004061(neural tube mantle layer) |
Children
| develops from: | UBERON:0002314 (midbrain tectum) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005882 (neural tube alar plate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 7.47e-44 | FFCP PHASE1:Mm9::chr1:158200818..158200829,-#_f67d635f5db3c21423e5967964bf235a | p@chr1:158200818..158200829, - |
| 7.47e-44 | FFCP PHASE2:Mm9::chr1:158200818..158200829,-#_f67d635f5db3c21423e5967964bf235a | p@chr1:158200818..158200829, - |
| 2.87e-30 | FFCP PHASE1:Mm9::chr1:155500060..155500061,+#_3186927f45dd50e1727453b8fdee8dc1 | p19@Rgs8 |
| 2.87e-30 | FFCP PHASE2:Mm9::chr15:22719411..22719436,+#_3186927f45dd50e1727453b8fdee8dc1 | p@chr15:22719411..22719436, + |
| 2.87e-30 | FFCP PHASE2:Mm9::chr1:155500060..155500061,+#_3186927f45dd50e1727453b8fdee8dc1 | p19@Rgs8 |
| 2.87e-30 | FFCP PHASE1:Mm9::chr15:22719411..22719436,+#_3186927f45dd50e1727453b8fdee8dc1 | p@chr15:22719411..22719436, + |
| 3.06e-23 | FFCP PHASE1:Mm9::chr2:127098489..127098493,-#_05fd140d4ea80ef2e3abda0e51425388 | p@chr2:127098489..127098493, - |
| 3.06e-23 | FFCP PHASE2:Mm9::chr2:127098489..127098493,-#_05fd140d4ea80ef2e3abda0e51425388 | p@chr2:127098489..127098493, - |
| 5.07e-23 | FFCP PHASE1:Mm9::chr16:96721083..96721092,+#_05745ac91b5c851f57d4d65c5c8a2a21 | p@chr16:96721083..96721092, + |
| 5.07e-23 | FFCP PHASE1:Mm9::chr2:158208771..158208772,+#_05745ac91b5c851f57d4d65c5c8a2a21 | p@chr2:158208771..158208772, + |
| 5.07e-23 | FFCP PHASE2:Mm9::chr2:158208771..158208772,+#_05745ac91b5c851f57d4d65c5c8a2a21 | p@chr2:158208771..158208772, + |
| 5.07e-23 | FFCP PHASE2:Mm9::chr16:96721083..96721092,+#_05745ac91b5c851f57d4d65c5c8a2a21 | p@chr16:96721083..96721092, + |
| 8.39e-23 | FFCP PHASE2:Mm9::chr6:20963159..20963195,-#_ad5b694dddb2697c6cb753cdb48bb331 | p1@ENSMUST00000157206 |
| 8.39e-23 | FFCP PHASE1:Mm9::chr6:20963159..20963195,-#_ad5b694dddb2697c6cb753cdb48bb331 | p1@ENSMUST00000157206 |
| 1.39e-22 | FFCP PHASE2:Mm9::chr6:119367617..119367641,-#_4da087f05866eb6401eb25d85b06361e | p7@Adipor2 |
| 1.39e-22 | FFCP PHASE1:Mm9::chr6:119367617..119367641,-#_4da087f05866eb6401eb25d85b06361e | p7@Adipor2 |
| 5.15e-19 | FFCP PHASE1:Mm9::chr14:52528327..52528336,-#_5c68ddc8bc3bab1dbb26bb7c7dbd4176 | p@chr14:52528327..52528336, - |
| 5.15e-19 | FFCP PHASE2:Mm9::chr14:52528327..52528336,-#_5c68ddc8bc3bab1dbb26bb7c7dbd4176 | p@chr14:52528327..52528336, - |
| 7.74e-19 | FFCP PHASE2:Mm9::chr19:32177340..32177351,-#_0cb0591ddffc5e701c1a1fd02a54d1c5 | p@chr19:32177340..32177351, - |
| 7.74e-19 | FFCP PHASE1:Mm9::chr19:32177340..32177351,-#_0cb0591ddffc5e701c1a1fd02a54d1c5 | p@chr19:32177340..32177351, - |
| 1.16e-18 | FFCP PHASE1:Mm9::chr4:83035887..83035924,-#_3cd590d293544011751c7b1cb5809670 | p@chr4:83035887..83035924, - |
| 1.16e-18 | FFCP PHASE1:Mm9::chr4:98216369..98216408,+#_3cd590d293544011751c7b1cb5809670 | p@chr4:98216369..98216408, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr4:98216369..98216408,+#_3cd590d293544011751c7b1cb5809670 | p@chr4:98216369..98216408, + |
| 1.16e-18 | FFCP PHASE2:Mm9::chr4:83035887..83035924,-#_3cd590d293544011751c7b1cb5809670 | p@chr4:83035887..83035924, - |
| 1.74e-18 | FFCP PHASE1:Mm9::chr8:123151369..123151375,+#_9a994076ebe7c8a3941ab7f0a3df38b5 | p@chr8:123151369..123151375, + |
| 1.74e-18 | FFCP PHASE2:Mm9::chr8:123151369..123151375,+#_9a994076ebe7c8a3941ab7f0a3df38b5 | p@chr8:123151369..123151375, + |
| 2.59e-18 | FFCP PHASE2:Mm9::chr5:128949415..128949424,+#_386e7db4a73736247585c6b8373a9dfd | p@chr5:128949415..128949424, + |
| 2.59e-18 | FFCP PHASE1:Mm9::chr8:108091532..108091548,-#_386e7db4a73736247585c6b8373a9dfd | p@chr8:108091532..108091548, - |
| 2.59e-18 | FFCP PHASE1:Mm9::chr5:128949415..128949424,+#_386e7db4a73736247585c6b8373a9dfd | p@chr5:128949415..128949424, + |
| 2.59e-18 | FFCP PHASE1:Mm9::chr8:108734860..108734874,+#_386e7db4a73736247585c6b8373a9dfd | p3@Prmt7 |
| 2.59e-18 | FFCP PHASE2:Mm9::chr8:108734860..108734874,+#_386e7db4a73736247585c6b8373a9dfd | p3@Prmt7 |
| 2.59e-18 | FFCP PHASE2:Mm9::chr8:108091532..108091548,-#_386e7db4a73736247585c6b8373a9dfd | p@chr8:108091532..108091548, - |
| 6.79e-16 | FFCP PHASE2:Mm9::chr1:101686777..101686780,+#_2486390bc7ce34429732646f149a1846 | p@chr1:101686777..101686780, + |
| 6.79e-16 | FFCP PHASE1:Mm9::chr1:101686777..101686780,+#_2486390bc7ce34429732646f149a1846 | p@chr1:101686777..101686780, + |
| 9.51e-16 | FFCP PHASE2:Mm9::chr9:113701949..113701960,+#_ebd062faa79201fa15f934b1c1ababb2 | p9@Clasp2 |
| 9.51e-16 | FFCP PHASE1:Mm9::chr6:120043366..120043377,+#_ebd062faa79201fa15f934b1c1ababb2 | p3@Ninj2 |
| 9.51e-16 | FFCP PHASE2:Mm9::chr17:69476739..69476749,+#_ebd062faa79201fa15f934b1c1ababb2 | p@chr17:69476739..69476749, + |
| 9.51e-16 | FFCP PHASE1:Mm9::chr10:115580937..115580958,+#_ebd062faa79201fa15f934b1c1ababb2 | p6@Ptprr |
| 9.51e-16 | FFCP PHASE2:Mm9::chr10:115580937..115580958,+#_ebd062faa79201fa15f934b1c1ababb2 | p6@Ptprr |
| 9.51e-16 | FFCP PHASE1:Mm9::chr9:113701949..113701960,+#_ebd062faa79201fa15f934b1c1ababb2 | p9@Clasp2 |
| 9.51e-16 | FFCP PHASE1:Mm9::chr17:69476739..69476749,+#_ebd062faa79201fa15f934b1c1ababb2 | p@chr17:69476739..69476749, + |
| 9.51e-16 | FFCP PHASE2:Mm9::chr6:120043366..120043377,+#_ebd062faa79201fa15f934b1c1ababb2 | p3@Ninj2 |
| 1.33e-15 | FFCP PHASE1:Mm9::chr11:67466144..67466155,+#_9f702ba925ddde8d5bfc2e8bc8f0a417 | p19@Gas7 |
| 1.33e-15 | FFCP PHASE2:Mm9::chr11:67466144..67466155,+#_9f702ba925ddde8d5bfc2e8bc8f0a417 | p19@Gas7 |
| 1.86e-15 | FFCP PHASE1:Mm9::chr11:55886412..55886420,+#_8c1f13667bf7ba2dd05d7d5ad30157bb | p@chr11:55886412..55886420, + |
| 1.86e-15 | FFCP PHASE2:Mm9::chr14:33139881..33139891,+#_8c1f13667bf7ba2dd05d7d5ad30157bb | p@chr14:33139881..33139891, + |
| 1.86e-15 | FFCP PHASE1:Mm9::chr10:111706834..111706844,+#_8c1f13667bf7ba2dd05d7d5ad30157bb | p@chr10:111706834..111706844, + |
| 1.86e-15 | FFCP PHASE1:Mm9::chr12:104552967..104552983,-#_8c1f13667bf7ba2dd05d7d5ad30157bb | p1@uc007ovb.1 |
| 1.86e-15 | FFCP PHASE1:Mm9::chr19:47099743..47099759,+#_8c1f13667bf7ba2dd05d7d5ad30157bb | p@chr19:47099743..47099759, + |
| 1.86e-15 | FFCP PHASE2:Mm9::chr10:111706834..111706844,+#_8c1f13667bf7ba2dd05d7d5ad30157bb | p@chr10:111706834..111706844, + |
| 1.86e-15 | FFCP PHASE2:Mm9::chr12:104552967..104552983,-#_8c1f13667bf7ba2dd05d7d5ad30157bb | p1@uc007ovb.1 |
| 1.86e-15 | FFCP PHASE2:Mm9::chr5:125342666..125342671,-#_8c1f13667bf7ba2dd05d7d5ad30157bb | p15@Ccdc92 |
| 1.86e-15 | FFCP PHASE1:Mm9::chr17:8492594..8492603,-#_8c1f13667bf7ba2dd05d7d5ad30157bb | p@chr17:8492594..8492603, - |
| 1.86e-15 | FFCP PHASE2:Mm9::chr11:55886412..55886420,+#_8c1f13667bf7ba2dd05d7d5ad30157bb | p@chr11:55886412..55886420, + |
| 1.86e-15 | FFCP PHASE1:Mm9::chr14:33139881..33139891,+#_8c1f13667bf7ba2dd05d7d5ad30157bb | p@chr14:33139881..33139891, + |
| 1.86e-15 | FFCP PHASE2:Mm9::chr17:8492594..8492603,-#_8c1f13667bf7ba2dd05d7d5ad30157bb | p@chr17:8492594..8492603, - |
| 1.86e-15 | FFCP PHASE2:Mm9::chr19:47099743..47099759,+#_8c1f13667bf7ba2dd05d7d5ad30157bb | p@chr19:47099743..47099759, + |
| 1.86e-15 | FFCP PHASE1:Mm9::chr5:125342666..125342671,-#_8c1f13667bf7ba2dd05d7d5ad30157bb | p15@Ccdc92 |
| 3.62e-14 | FFCP PHASE1:Mm9::chr16:96720848..96720858,+#_23035eaa9c3de461afea0e2f80d4add5 | p@chr16:96720848..96720858, + |
| 3.62e-14 | FFCP PHASE1:Mm9::chr19:55972431..55972440,+#_23035eaa9c3de461afea0e2f80d4add5 | p63@Tcf7l2 |
| 3.62e-14 | FFCP PHASE2:Mm9::chr19:55972431..55972440,+#_23035eaa9c3de461afea0e2f80d4add5 | p63@Tcf7l2 |
| 3.62e-14 | FFCP PHASE2:Mm9::chr16:96720848..96720858,+#_23035eaa9c3de461afea0e2f80d4add5 | p@chr16:96720848..96720858, + |
| 4.85e-14 | FFCP PHASE2:Mm9::chr14:93478934..93478944,-#_ef50817acc3c71b02705021899993ff9 | p@chr14:93478934..93478944, - |
| 4.85e-14 | FFCP PHASE1:Mm9::chr14:93478934..93478944,-#_ef50817acc3c71b02705021899993ff9 | p@chr14:93478934..93478944, - |
| 6.5e-14 | FFCP PHASE1:Mm9::chr2:157163160..157163163,-#_ca3f2ed6fc3043fd75f9de2b3a37396c | p2@Ghrh |
| 6.5e-14 | FFCP PHASE2:Mm9::chr2:157163160..157163163,-#_ca3f2ed6fc3043fd75f9de2b3a37396c | p2@Ghrh |
| 8.69e-14 | FFCP PHASE2:Mm9::chr13:97841389..97841402,+#_5bb4290c95efab3d6c117825f55c9188 | p7@Fam169a |
| 8.69e-14 | FFCP PHASE2:Mm9::chr2:31133553..31133564,+#_5bb4290c95efab3d6c117825f55c9188 | p@chr2:31133553..31133564, + |
| 8.69e-14 | FFCP PHASE1:Mm9::chr13:97841389..97841402,+#_5bb4290c95efab3d6c117825f55c9188 | p7@Fam169a |
| 8.69e-14 | FFCP PHASE1:Mm9::chr1:6477452..6477459,+#_5bb4290c95efab3d6c117825f55c9188 | p8@St18 |
| 8.69e-14 | FFCP PHASE2:Mm9::chr10:19891807..19891818,+#_5bb4290c95efab3d6c117825f55c9188 | p@chr10:19891807..19891818, + |
| 8.69e-14 | FFCP PHASE1:Mm9::chr2:31133553..31133564,+#_5bb4290c95efab3d6c117825f55c9188 | p@chr2:31133553..31133564, + |
| 8.69e-14 | FFCP PHASE1:Mm9::chr10:19891807..19891818,+#_5bb4290c95efab3d6c117825f55c9188 | p@chr10:19891807..19891818, + |
| 8.69e-14 | FFCP PHASE2:Mm9::chr1:6477452..6477459,+#_5bb4290c95efab3d6c117825f55c9188 | p8@St18 |
| 1.16e-13 | FFCP PHASE1:Mm9::chr2:163149068..163149077,+#_24f5cde9bd4a1fd0f5285919f035a7b8 | p@chr2:163149068..163149077, + |
| 1.16e-13 | FFCP PHASE1:Mm9::chr10:3557489..3557496,-#_24f5cde9bd4a1fd0f5285919f035a7b8 | p9@Oprm1 |
| 1.16e-13 | FFCP PHASE2:Mm9::chr10:3557489..3557496,-#_24f5cde9bd4a1fd0f5285919f035a7b8 | p9@Oprm1 |
| 1.16e-13 | FFCP PHASE1:Mm9::chr9:103085667..103085678,+#_24f5cde9bd4a1fd0f5285919f035a7b8 | p@chr9:103085667..103085678, + |
| 1.16e-13 | FFCP PHASE2:Mm9::chr9:103085667..103085678,+#_24f5cde9bd4a1fd0f5285919f035a7b8 | p@chr9:103085667..103085678, + |
| 1.16e-13 | FFCP PHASE2:Mm9::chr2:163149068..163149077,+#_24f5cde9bd4a1fd0f5285919f035a7b8 | p@chr2:163149068..163149077, + |
| 1.55e-13 | FFCP PHASE2:Mm9::chr5:123300144..123300151,+#_7314dece29173a04f757c285349eaee0 | p5@Rnf34 |
| 1.55e-13 | FFCP PHASE2:Mm9::chr11:52045677..52045682,+#_7314dece29173a04f757c285349eaee0 | p6@Skp1a |
| 1.55e-13 | FFCP PHASE1:Mm9::chr11:52045677..52045682,+#_7314dece29173a04f757c285349eaee0 | p6@Skp1a |
| 1.55e-13 | FFCP PHASE1:Mm9::chr5:123300144..123300151,+#_7314dece29173a04f757c285349eaee0 | p5@Rnf34 |
| 2.06e-13 | FFCP PHASE2:Mm9::chr6:126588640..126588687,-#_3ae46de9568193625b971ada0cc79aa9 | p@chr6:126588640..126588687, - |
| 2.06e-13 | FFCP PHASE1:Mm9::chr10:31110259..31110265,-#_3ae46de9568193625b971ada0cc79aa9 | p@chr10:31110259..31110265, - |
| 2.06e-13 | FFCP PHASE1:Mm9::chr6:126588640..126588687,-#_3ae46de9568193625b971ada0cc79aa9 | p@chr6:126588640..126588687, - |
| 2.06e-13 | FFCP PHASE2:Mm9::chr4:43519210..43519232,+#_3ae46de9568193625b971ada0cc79aa9 | p@chr4:43519210..43519232, + |
| 2.06e-13 | FFCP PHASE2:Mm9::chr7:52184898..52184907,-#_3ae46de9568193625b971ada0cc79aa9 | p6@Ap2a1 |
| 2.06e-13 | FFCP PHASE1:Mm9::chr4:43519210..43519232,+#_3ae46de9568193625b971ada0cc79aa9 | p@chr4:43519210..43519232, + |
| 2.06e-13 | FFCP PHASE2:Mm9::chr6:45010099..45010108,+#_3ae46de9568193625b971ada0cc79aa9 | p13@Cntnap2 |
| 2.06e-13 | FFCP PHASE1:Mm9::chr6:45010099..45010108,+#_3ae46de9568193625b971ada0cc79aa9 | p13@Cntnap2 |
| 2.06e-13 | FFCP PHASE1:Mm9::chr7:52184898..52184907,-#_3ae46de9568193625b971ada0cc79aa9 | p6@Ap2a1 |
| 2.06e-13 | FFCP PHASE2:Mm9::chr10:31110259..31110265,-#_3ae46de9568193625b971ada0cc79aa9 | p@chr10:31110259..31110265, - |
| 1.2e-12 | FFCP PHASE2:Mm9::chr10:4424212..4424215,+#_fd6ddc727bfbc957428ee93e2d09742f | p3@Rgs17 |
| 1.2e-12 | FFCP PHASE1:Mm9::chr10:4424212..4424215,+#_fd6ddc727bfbc957428ee93e2d09742f | p3@Rgs17 |
| 2.01e-12 | FFCP PHASE2:Mm9::chr2:155645140..155645170,-#_29fb0a70c5268618757374530faec956 | p1@ENSMUST00000124586 |
| 2.01e-12 | FFCP PHASE1:Mm9::chr10:85495564..85495574,+#_29fb0a70c5268618757374530faec956 | p14@Fbxo7 |
| 2.01e-12 | FFCP PHASE2:Mm9::chr10:85495564..85495574,+#_29fb0a70c5268618757374530faec956 | p14@Fbxo7 |
| 2.01e-12 | FFCP PHASE1:Mm9::chr2:155645140..155645170,-#_29fb0a70c5268618757374530faec956 | p1@ENSMUST00000124586 |
