UBERON:0004875: Difference between revisions
From FANTOM5_SSTAR
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|located_in= | |located_in= | ||
|name=nephrogenic cord | |name=nephrogenic cord | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000922 | |part_of=UBERON:0000922 | ||
Latest revision as of 17:49, 12 September 2014
| Name: | nephrogenic cord | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord] | ||
| Xrefs: |
| ||
| Synonyms: | "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | ||
| Comments: | part_of or develops_from urogenital ridge? |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0004876(urogenital ridge) |
| part_of: | UBERON:0000922(embryo) |
Children
| part of: | UBERON:0005754 (rostral part of nephrogenic cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21381141..21381155,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21381141..21381155, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:62775330..62775347,-#_2c808356ccd804cd36d69a04f78b05be | p@chr18:62775330..62775347, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_2c808356ccd804cd36d69a04f78b05be | p@chr9:70761931..70761971, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:164787162..164787188,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:164787162..164787188, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:156048695..156048707, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:74440187..74440209,-#_2c808356ccd804cd36d69a04f78b05be | p@chr2:74440187..74440209, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:50280126..50280140, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_2c808356ccd804cd36d69a04f78b05be | p@chr6:18338054..18338077, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:110773718..110773729, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:19141429..19141440,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19141429..19141440, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_2c808356ccd804cd36d69a04f78b05be | p2@ENSMUST00000152401 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31377177..31377184,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31377177..31377184, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:51676936..51676963,-#_2c808356ccd804cd36d69a04f78b05be | p6@Rnase12 |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:164787162..164787188,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:164787162..164787188, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:130496166..130496188,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:130496166..130496188, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:20817297..20817313,+#_2c808356ccd804cd36d69a04f78b05be | p@chr11:20817297..20817313, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:23057222..23057234,+#_2c808356ccd804cd36d69a04f78b05be | p1@Defb13 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:155738967..155738974,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:155738967..155738974, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:164434157..164434162,-#_2c808356ccd804cd36d69a04f78b05be | p@chr2:164434157..164434162, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:89597834..89597840, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:63630486..63630493,+#_2c808356ccd804cd36d69a04f78b05be | p5@Defb43 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_2c808356ccd804cd36d69a04f78b05be | p@chr8:107073888..107073914, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr4:134893699..134893708,+#_2c808356ccd804cd36d69a04f78b05be | p@chr4:134893699..134893708, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:100634942..100634968,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:100634942..100634968, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:158083961..158083968,+#_2c808356ccd804cd36d69a04f78b05be | p4@Bpi |
| 4.54e-44 | FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_2c808356ccd804cd36d69a04f78b05be | p@chr10:116399500..116399516, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:127470322..127470326,+#_2c808356ccd804cd36d69a04f78b05be | p@chr10:127470322..127470326, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35651650..35651673,-#_2c808356ccd804cd36d69a04f78b05be | p4@9230110F15Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_2c808356ccd804cd36d69a04f78b05be | p@chr8:113585714..113585722, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr19:17591760..17591765,+#_2c808356ccd804cd36d69a04f78b05be | p@chr19:17591760..17591765, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:51677155..51677162,-#_2c808356ccd804cd36d69a04f78b05be | p5@Rnase12 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21378927..21378932,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21378927..21378932, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:25752228..25752237,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:25752228..25752237, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35715997..35716008,+#_2c808356ccd804cd36d69a04f78b05be | p1@9230113P08Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:150092027..150092070,-#_2c808356ccd804cd36d69a04f78b05be | p@chr4:150092027..150092070, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:87922962..87922982, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:124447371..124447383,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:124447371..124447383, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:59845376..59845393,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:59845376..59845393, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21385325..21385329,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21385325..21385329, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:73221062..73221084,+#_2c808356ccd804cd36d69a04f78b05be | p@chr17:73221062..73221084, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164499572..164499580,-#_2c808356ccd804cd36d69a04f78b05be | p2@Wfdc11 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_2c808356ccd804cd36d69a04f78b05be | p11@Arhgef40 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:52712744..52712754,+#_2c808356ccd804cd36d69a04f78b05be | p@chr13:52712744..52712754, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr12:114385720..114385732,-#_2c808356ccd804cd36d69a04f78b05be | p@chr12:114385720..114385732, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21378296..21378303,+#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21378296..21378303, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr6:49817766..49817772,-#_2c808356ccd804cd36d69a04f78b05be | p@chr6:49817766..49817772, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:35651807..35651818,-#_2c808356ccd804cd36d69a04f78b05be | p3@9230110F15Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:103276578..103276585,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:103276578..103276585, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_2c808356ccd804cd36d69a04f78b05be | p@chr7:151928014..151928021, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379098..21379104,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379098..21379104, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35651650..35651673,-#_2c808356ccd804cd36d69a04f78b05be | p4@9230110F15Rik |
| 4.54e-44 | FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_2c808356ccd804cd36d69a04f78b05be | p@chr16:92995710..92995753, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr15:54678983..54678995,-#_2c808356ccd804cd36d69a04f78b05be | p@chr15:54678983..54678995, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:20817297..20817313,+#_2c808356ccd804cd36d69a04f78b05be | p@chr11:20817297..20817313, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:22061721..22061728,-#_2c808356ccd804cd36d69a04f78b05be | p2@Gm6040, p2@LOC100503992 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr10:91753336..91753348,-#_2c808356ccd804cd36d69a04f78b05be | p@chr10:91753336..91753348, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:25563187..25563205,+#_2c808356ccd804cd36d69a04f78b05be | p@chr7:25563187..25563205, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:88272459..88272484,-#_2c808356ccd804cd36d69a04f78b05be | p@chr5:88272459..88272484, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:25678985..25679033,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:25678985..25679033, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr7:105313229..105313234,-#_2c808356ccd804cd36d69a04f78b05be | p17@Capn5 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr17:24865194..24865204,+#_2c808356ccd804cd36d69a04f78b05be | p@chr17:24865194..24865204, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21385729..21385768,+#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21385729..21385768, + |
