UBERON:0004348: Difference between revisions
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|located_in= | |located_in= | ||
|name=optic eminence | |name=optic eminence | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 17:45, 12 September 2014
| Name: | optic eminence | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "the embryonic structure that gives rise to the corneal ectoderm" [MP:0006305] | ||
| Xrefs: |
|
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002050(embryonic structure) |
|---|
Children
| develops from: | UBERON:0000964 (cornea) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004348 (optic eminence), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.67e-66 | FFCP PHASE1:Hg19::chr17:39023189..39023197,-#_bf13cc4c95c82d7554b569dc190dfdd2 | p2@KRT12 |
| 4.67e-66 | FFCP PHASE2:Hg19::chr17:39023189..39023197,-#_bf13cc4c95c82d7554b569dc190dfdd2 | p2@KRT12 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:150910973..150910976,-#_7ecad7457c914e62276a66be9d89283d | p@chr7:150910973..150910976, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:52362029..52362031,+#_7ecad7457c914e62276a66be9d89283d | p@chr3:52362029..52362031, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:150910973..150910976,-#_7ecad7457c914e62276a66be9d89283d | p@chr7:150910973..150910976, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:52362029..52362031,+#_7ecad7457c914e62276a66be9d89283d | p@chr3:52362029..52362031, + |
| 3.31e-40 | FFCP PHASE2:Hg19::chr12:53189894..53189905,-#_dcb121932a2e524d4813e434b17ba578 | p1@KRT3 |
| 3.31e-40 | FFCP PHASE1:Hg19::chr12:53189894..53189905,-#_dcb121932a2e524d4813e434b17ba578 | p1@KRT3 |
| 5.98e-34 | FFCP PHASE1:Hg19::chr22:30144620..30144638,-#_b71e9988c20b0fc3f5ca67672b626947 | p7@ZMAT5 |
| 5.98e-34 | FFCP PHASE2:Hg19::chr22:30144620..30144638,-#_b71e9988c20b0fc3f5ca67672b626947 | p7@ZMAT5 |
| 1.17e-33 | FFCP PHASE1:Hg19::chr8:124206334..124206344,+#_8fefb65c5651d417d9b0a6d1c52cfa8b | p@chr8:124206334..124206344, + |
| 1.17e-33 | FFCP PHASE2:Hg19::chr8:124206334..124206344,+#_8fefb65c5651d417d9b0a6d1c52cfa8b | p@chr8:124206334..124206344, + |
| 3.16e-29 | FFCP PHASE2:Hg19::chr1:19403546..19403571,-#_8f23c9c6d1cc427d1de945feab9d9e3f | p@chr1:19403546..19403571, - |
| 3.16e-29 | FFCP PHASE1:Hg19::chr7:1600419..1600429,-#_8f23c9c6d1cc427d1de945feab9d9e3f | p11@TMEM184A |
| 3.16e-29 | FFCP PHASE2:Hg19::chr7:1600419..1600429,-#_8f23c9c6d1cc427d1de945feab9d9e3f | p11@TMEM184A |
| 3.16e-29 | FFCP PHASE1:Hg19::chr1:19403546..19403571,-#_8f23c9c6d1cc427d1de945feab9d9e3f | p@chr1:19403546..19403571, - |
| 5.61e-29 | FFCP PHASE2:Hg19::chr12:48164790..48164808,-#_5108f37387f8d2f34e988635bbcf4bd4 | p16@RAPGEF3 |
| 5.61e-29 | FFCP PHASE1:Hg19::chr12:48164790..48164808,-#_5108f37387f8d2f34e988635bbcf4bd4 | p16@RAPGEF3 |
| 5.61e-29 | FFCP PHASE1:Hg19::chr20:43743762..43743770,-#_5108f37387f8d2f34e988635bbcf4bd4 | p3@WFDC5 |
| 5.61e-29 | FFCP PHASE2:Hg19::chr20:43743762..43743770,-#_5108f37387f8d2f34e988635bbcf4bd4 | p3@WFDC5 |
| 5.56e-26 | FFCP PHASE2:Hg19::chr16:3014251..3014254,+#_01b817974e2e608a80337b58a22324bc | p3@KREMEN2 |
| 5.56e-26 | FFCP PHASE1:Hg19::chr16:3014251..3014254,+#_01b817974e2e608a80337b58a22324bc | p3@KREMEN2 |
| 6.73e-26 | FFCP PHASE1:Hg19::chr6:35048829..35048844,+#_26bae6d614dede3e27a36439e75bc258 | p@chr6:35048829..35048844, + |
| 6.73e-26 | FFCP PHASE2:Hg19::chr6:35048829..35048844,+#_26bae6d614dede3e27a36439e75bc258 | p@chr6:35048829..35048844, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr15:49255230..49255248,-#_fe997663a01d202e6a9f51a9a35a6a68 | p16@SHC4 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr16:56368957..56368963,+#_fe997663a01d202e6a9f51a9a35a6a68 | p@chr16:56368957..56368963, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr8:22932230..22932233,-#_fe997663a01d202e6a9f51a9a35a6a68 | p5@ENST00000520840, p5@ENST00000523806 |
| 7.14e-26 | FFCP PHASE2:Hg19::chr16:56368957..56368963,+#_fe997663a01d202e6a9f51a9a35a6a68 | p@chr16:56368957..56368963, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr10:92617531..92617541,-#_fe997663a01d202e6a9f51a9a35a6a68 | p8@HTR7 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr10:92617531..92617541,-#_fe997663a01d202e6a9f51a9a35a6a68 | p8@HTR7 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr15:49255230..49255248,-#_fe997663a01d202e6a9f51a9a35a6a68 | p16@SHC4 |
| 7.14e-26 | FFCP PHASE1:Hg19::chr6:113369869..113369877,+#_fe997663a01d202e6a9f51a9a35a6a68 | p@chr6:113369869..113369877, + |
| 7.14e-26 | FFCP PHASE2:Hg19::chr6:113369869..113369877,+#_fe997663a01d202e6a9f51a9a35a6a68 | p@chr6:113369869..113369877, + |
| 7.14e-26 | FFCP PHASE1:Hg19::chr8:22932230..22932233,-#_fe997663a01d202e6a9f51a9a35a6a68 | p5@ENST00000520840, p5@ENST00000523806 |
| 8.66e-26 | FFCP PHASE1:Hg19::chr11:67463189..67463193,-#_3c996a5c8d85f7e0735e03d53e510a03 | p@chr11:67463189..67463193, - |
| 8.66e-26 | FFCP PHASE2:Hg19::chr11:67463189..67463193,-#_3c996a5c8d85f7e0735e03d53e510a03 | p@chr11:67463189..67463193, - |
| 1.0e-22 | FFCP PHASE1:Hg19::chr12:46897588..46897603,+#_87458f44abe77ab1f0f2f5b202ae7332 | p@chr12:46897588..46897603, + |
| 1.0e-22 | FFCP PHASE2:Hg19::chr12:46897588..46897603,+#_87458f44abe77ab1f0f2f5b202ae7332 | p@chr12:46897588..46897603, + |
| 1.12e-22 | FFCP PHASE1:Hg19::chr13:20934450..20934456,+#_db010e3a5cb3c1a95d4dc85cdfc7dc8d | p@chr13:20934450..20934456, + |
| 1.12e-22 | FFCP PHASE2:Hg19::chr13:20934450..20934456,+#_db010e3a5cb3c1a95d4dc85cdfc7dc8d | p@chr13:20934450..20934456, + |
| 1.25e-22 | FFCP PHASE1:Hg19::chr19:51538096..51538109,-#_557d80c8d033a92e33b865eca9114fce | p5@KLK12 |
| 1.25e-22 | FFCP PHASE2:Hg19::chr19:51538096..51538109,-#_557d80c8d033a92e33b865eca9114fce | p5@KLK12 |
| 5.17e-21 | FFCP PHASE1:Hg19::chr10:5529595..5529606,-#_df7121fd134889f7c012338870a76a98 | p@chr10:5529595..5529606, - |
| 5.17e-21 | FFCP PHASE2:Hg19::chr10:5529595..5529606,-#_df7121fd134889f7c012338870a76a98 | p@chr10:5529595..5529606, - |
| 7.74e-21 | FFCP PHASE1:Hg19::chr19:1249729..1249741,+#_9540e9b5944271ed59f9a696e93a2169 | p19@MIDN |
| 7.74e-21 | FFCP PHASE2:Hg19::chr19:1249729..1249741,+#_9540e9b5944271ed59f9a696e93a2169 | p19@MIDN |
| 1.15e-20 | FFCP PHASE1:Hg19::chr2:131669803..131669810,+#_f5e0c41850a63ce954dc299fdfd853b8 | p@chr2:131669803..131669810, + |
| 1.15e-20 | FFCP PHASE2:Hg19::chr2:131669803..131669810,+#_f5e0c41850a63ce954dc299fdfd853b8 | p@chr2:131669803..131669810, + |
| 1.28e-20 | FFCP PHASE1:Hg19::chr9:127212697..127212708,+#_216d5ce34ff735145f2ab2c0a7ee614d | p@chr9:127212697..127212708, + |
| 1.28e-20 | FFCP PHASE2:Hg19::chr9:127212697..127212708,+#_216d5ce34ff735145f2ab2c0a7ee614d | p@chr9:127212697..127212708, + |
| 1.56e-20 | FFCP PHASE1:Hg19::chr19:1905001..1905006,+#_02c2c1df568aa178cf011ac22dae86e6 | p11@SCAMP4 |
| 1.56e-20 | FFCP PHASE2:Hg19::chr19:1905001..1905006,+#_02c2c1df568aa178cf011ac22dae86e6 | p11@SCAMP4 |
| 1.9e-20 | FFCP PHASE2:Hg19::chr19:50709335..50709346,+#_bad3117b335a53ddce5fe305f227bff1 | p@chr19:50709335..50709346, + |
| 1.9e-20 | FFCP PHASE2:Hg19::chr15:72490099..72490109,-#_bad3117b335a53ddce5fe305f227bff1 | p3@GRAMD2 |
| 1.9e-20 | FFCP PHASE1:Hg19::chr19:50709335..50709346,+#_bad3117b335a53ddce5fe305f227bff1 | p@chr19:50709335..50709346, + |
| 1.9e-20 | FFCP PHASE1:Hg19::chr15:72490099..72490109,-#_bad3117b335a53ddce5fe305f227bff1 | p3@GRAMD2 |
| 2.76e-19 | FFCP PHASE1:Hg19::chr20:25176603..25176614,+#_2444bfb0ee94b574e11ed3e460f70785 | p@chr20:25176603..25176614, + |
| 2.76e-19 | FFCP PHASE2:Hg19::chr20:25176603..25176614,+#_2444bfb0ee94b574e11ed3e460f70785 | p@chr20:25176603..25176614, + |
| 6.77e-19 | FFCP PHASE1:Hg19::chr19:44306567..44306574,-#_663043a4addc6660369b701a6c2a6c35 | p7@LYPD5 |
| 6.77e-19 | FFCP PHASE2:Hg19::chr19:44306567..44306574,-#_663043a4addc6660369b701a6c2a6c35 | p7@LYPD5 |
| 8.88e-19 | FFCP PHASE2:Hg19::chr2:28853455..28853476,+#_768e234740273ecc7cdbf1b554e3fa97 | p@chr2:28853455..28853476, + |
| 8.88e-19 | FFCP PHASE1:Hg19::chr2:28853455..28853476,+#_768e234740273ecc7cdbf1b554e3fa97 | p@chr2:28853455..28853476, + |
| 9.72e-19 | FFCP PHASE1:Hg19::chr20:42816206..42816211,-#_ec7804903ceac1c4cb4d250de0ea7ac7 | p8@JPH2 |
| 9.72e-19 | FFCP PHASE1:Hg19::chr19:51538121..51538134,-#_ec7804903ceac1c4cb4d250de0ea7ac7 | p4@KLK12 |
| 9.72e-19 | FFCP PHASE2:Hg19::chr20:42816206..42816211,-#_ec7804903ceac1c4cb4d250de0ea7ac7 | p8@JPH2 |
| 9.72e-19 | FFCP PHASE2:Hg19::chr19:51538121..51538134,-#_ec7804903ceac1c4cb4d250de0ea7ac7 | p4@KLK12 |
| 8.69e-18 | FFCP PHASE2:Hg19::chr6:151770193..151770196,-#_605b0d954d2d822e0f68f18131ab4815 | p@chr6:151770193..151770196, - |
| 8.69e-18 | FFCP PHASE2:Hg19::chr3:124535316..124535340,+#_605b0d954d2d822e0f68f18131ab4815 | p@chr3:124535316..124535340, + |
| 8.69e-18 | FFCP PHASE1:Hg19::chr1:44820685..44820695,-#_605b0d954d2d822e0f68f18131ab4815 | p10@ERI3 |
| 8.69e-18 | FFCP PHASE1:Hg19::chr5:59064162..59064173,-#_605b0d954d2d822e0f68f18131ab4815 | p72@PDE4D |
| 8.69e-18 | FFCP PHASE2:Hg19::chr5:59064162..59064173,-#_605b0d954d2d822e0f68f18131ab4815 | p72@PDE4D |
| 8.69e-18 | FFCP PHASE1:Hg19::chr21:47410794..47410799,+#_605b0d954d2d822e0f68f18131ab4815 | p@chr21:47410794..47410799, + |
| 8.69e-18 | FFCP PHASE1:Hg19::chr6:151770193..151770196,-#_605b0d954d2d822e0f68f18131ab4815 | p@chr6:151770193..151770196, - |
| 8.69e-18 | FFCP PHASE2:Hg19::chr1:44820685..44820695,-#_605b0d954d2d822e0f68f18131ab4815 | p10@ERI3 |
| 8.69e-18 | FFCP PHASE2:Hg19::chr21:47410794..47410799,+#_605b0d954d2d822e0f68f18131ab4815 | p@chr21:47410794..47410799, + |
| 8.69e-18 | FFCP PHASE1:Hg19::chr3:124535316..124535340,+#_605b0d954d2d822e0f68f18131ab4815 | p@chr3:124535316..124535340, + |
| 1.03e-17 | FFCP PHASE2:Hg19::chr1:9970194..9970195,-#_a067e7105d549f51ae0306b9ea798844 | p14@CTNNBIP1 |
| 1.03e-17 | FFCP PHASE1:Hg19::chr5:79375654..79375674,+#_a067e7105d549f51ae0306b9ea798844 | p@chr5:79375654..79375674, + |
| 1.03e-17 | FFCP PHASE1:Hg19::chr2:25383828..25383855,-#_a067e7105d549f51ae0306b9ea798844 | p4@POMC |
| 1.03e-17 | FFCP PHASE2:Hg19::chr5:79375654..79375674,+#_a067e7105d549f51ae0306b9ea798844 | p@chr5:79375654..79375674, + |
| 1.03e-17 | FFCP PHASE1:Hg19::chr15:101459410..101459421,-#_a067e7105d549f51ae0306b9ea798844 | p2@ENST00000560068 |
| 1.03e-17 | FFCP PHASE2:Hg19::chr2:25383828..25383855,-#_a067e7105d549f51ae0306b9ea798844 | p4@POMC |
| 1.03e-17 | FFCP PHASE1:Hg19::chr10:74020629..74020634,-#_a067e7105d549f51ae0306b9ea798844 | p@chr10:74020629..74020634, - |
| 1.03e-17 | FFCP PHASE1:Hg19::chr1:9970194..9970195,-#_a067e7105d549f51ae0306b9ea798844 | p14@CTNNBIP1 |
| 1.03e-17 | FFCP PHASE2:Hg19::chr10:74020629..74020634,-#_a067e7105d549f51ae0306b9ea798844 | p@chr10:74020629..74020634, - |
| 1.03e-17 | FFCP PHASE1:Hg19::chr10:43133595..43133606,-#_a067e7105d549f51ae0306b9ea798844 | p@chr10:43133595..43133606, - |
| 1.03e-17 | FFCP PHASE2:Hg19::chr10:43133595..43133606,-#_a067e7105d549f51ae0306b9ea798844 | p@chr10:43133595..43133606, - |
| 1.03e-17 | FFCP PHASE2:Hg19::chr11:65265332..65265342,+#_a067e7105d549f51ae0306b9ea798844 | p19@MALAT1 |
| 1.03e-17 | FFCP PHASE1:Hg19::chr11:65265332..65265342,+#_a067e7105d549f51ae0306b9ea798844 | p19@MALAT1 |
| 1.03e-17 | FFCP PHASE2:Hg19::chr15:101459410..101459421,-#_a067e7105d549f51ae0306b9ea798844 | p2@ENST00000560068 |
| 2.59e-17 | FFCP PHASE2:Hg19::chr11:119039069..119039081,+#_592cef9f21ed3006a2647ec609cee4a5 | p9@NLRX1 |
| 2.59e-17 | FFCP PHASE1:Hg19::chr11:119039069..119039081,+#_592cef9f21ed3006a2647ec609cee4a5 | p9@NLRX1 |
| 2.09e-16 | FFCP PHASE2:Hg19::chr12:48164812..48164829,-#_976490f31efed106666f62ba656ede0f | p14@RAPGEF3 |
| 2.09e-16 | FFCP PHASE1:Hg19::chr12:48164812..48164829,-#_976490f31efed106666f62ba656ede0f | p14@RAPGEF3 |
| 2.64e-16 | FFCP PHASE1:Hg19::chr2:131669791..131669801,+#_bffbc0e27f184a597b538f32aa5cfb5d | p@chr2:131669791..131669801, + |
| 2.64e-16 | FFCP PHASE2:Hg19::chr2:131669791..131669801,+#_bffbc0e27f184a597b538f32aa5cfb5d | p@chr2:131669791..131669801, + |
| 3.32e-16 | FFCP PHASE2:Hg19::chr17:39742822..39742850,+#_5874ea8cd00d16435bd7fa6a5ae82d9e | p@chr17:39742822..39742850, + |
| 3.32e-16 | FFCP PHASE1:Hg19::chr17:39742822..39742850,+#_5874ea8cd00d16435bd7fa6a5ae82d9e | p@chr17:39742822..39742850, + |
| 3.59e-16 | FFCP PHASE1:Hg19::chr1:3591362..3591369,-#_16aa29c1dd43f411c6a540ae74803674 | p@chr1:3591362..3591369, - |
| 3.59e-16 | FFCP PHASE2:Hg19::chr1:3591362..3591369,-#_16aa29c1dd43f411c6a540ae74803674 | p@chr1:3591362..3591369, - |
