UBERON:0001872: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|located_in= | |located_in= | ||
|name=parietal lobe | |name=parietal lobe | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0001950 | |part_of=UBERON:0001950 | ||
Latest revision as of 17:21, 12 September 2014
| Name: | parietal lobe | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Parietal lobe is the one of five lobes of the cerebral hemisphere which occupies the dorsal-posterior portion of the hemisphere. It is bounded by the central sulcus on its anterior border and and by the longitudinal cerebral fissure on its medial border. Posteriorly it shares an arbitrary border with the occipital lobe." [Wikipedia:Parietal_lobe] | ||
| Xrefs: |
| ||
| Synonyms: |
"lobus parietalis" RELATED LATIN [Wikipedia:Parietal_lobe] "parietal cortex" EXACT [] "parietal neocortex" EXACT [DHB:PCx] "parietal region" EXACT [] "regio parietalis" EXACT [FMA:61826, FMA:TA] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_61826-MA_0000916 | ||
| Subset: | uberon_slim |
Gray726_parietal_lobe.png]
200px-Gray726_parietal_lobe.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0016526(lobe of cerebral hemisphere) |
|---|---|
| part_of: | UBERON:0001950(neocortex) |
Children
| is a: | FF:10356-105E5 (parietal lobe, newborn, donor10223),FF:10373-105G4 (parietal cortex, adult, donor10258) |
|---|---|
| derives from: | FF:0010034 (human parietal lobe - adult sample),FF:0010072 (human parietal lobe - fetal sample) |
| part of: | UBERON:0002581 (postcentral gyrus),FF:0010072 (human parietal lobe - fetal sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10032-101E5 (postcentral gyrus, adult, pool1)
- 10034-101E7 (parietal lobe, adult, pool1)
- 10072-101I9 (parietal lobe, fetal, donor1)
- 10157-103A4 (parietal lobe, adult, donor10252)
- 10171-103B9 (parietal lobe - adult, donor10196)
- 10356-105E5 (parietal lobe, newborn, donor10223)
- 10373-105G4 (parietal cortex, adult, donor10258)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001872 (parietal lobe), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.17e-63 | FFCP PHASE2:Hg19::chr18:5721892..5721909,+#_9393da0c4dd21fe090d1141d4658c4c4 | p@chr18:5721892..5721909, + |
| 2.17e-63 | FFCP PHASE1:Hg19::chr18:5721892..5721909,+#_9393da0c4dd21fe090d1141d4658c4c4 | p@chr18:5721892..5721909, + |
| 1.65e-59 | FFCP PHASE1:Hg19::chr6:109200527..109200537,+#_29ef8ebacc6986f49c9802330fd0e0cc | p@chr6:109200527..109200537, + |
| 1.65e-59 | FFCP PHASE2:Hg19::chr6:109200527..109200537,+#_29ef8ebacc6986f49c9802330fd0e0cc | p@chr6:109200527..109200537, + |
| 3.85e-58 | FFCP PHASE2:Hg19::chr7:39017504..39017519,+#_7c821cdb54234241d5ee9ff9100e7043 | p3@POU6F2 |
| 3.85e-58 | FFCP PHASE1:Hg19::chr7:39017504..39017519,+#_7c821cdb54234241d5ee9ff9100e7043 | p3@POU6F2 |
| 2.41e-57 | FFCP PHASE2:Hg19::chr8:143660403..143660420,+#_144d7fabd2d6112c32021e02a4b114f1 | p@chr8:143660403..143660420, + |
| 2.41e-57 | FFCP PHASE1:Hg19::chr8:143660403..143660420,+#_144d7fabd2d6112c32021e02a4b114f1 | p@chr8:143660403..143660420, + |
| 3.89e-55 | FFCP PHASE1:Hg19::chr12:58026893..58026902,-#_4da3a76f81b943872a9ec8ca05670c02 | p6@B4GALNT1 |
| 3.89e-55 | FFCP PHASE2:Hg19::chr12:58026893..58026902,-#_4da3a76f81b943872a9ec8ca05670c02 | p6@B4GALNT1 |
| 2.08e-54 | FFCP PHASE1:Hg19::chr2:162280765..162280777,+#_0d125d526b535bb719024f431f22278c | p6@SLC4A10 |
| 2.08e-54 | FFCP PHASE2:Hg19::chr2:162280765..162280777,+#_0d125d526b535bb719024f431f22278c | p6@SLC4A10 |
| 3.74e-53 | FFCP PHASE2:Hg19::chr11:94134299..94134309,-#_3062b6549e8c71aaeb3af16401234306 | p2@AB384231 |
| 3.74e-53 | FFCP PHASE2:Hg19::chr12:16701927..16701933,-#_3062b6549e8c71aaeb3af16401234306 | p@chr12:16701927..16701933, - |
| 3.74e-53 | FFCP PHASE1:Hg19::chr12:16701927..16701933,-#_3062b6549e8c71aaeb3af16401234306 | p@chr12:16701927..16701933, - |
| 3.74e-53 | FFCP PHASE1:Hg19::chr11:94134299..94134309,-#_3062b6549e8c71aaeb3af16401234306 | p2@AB384231 |
| 1.75e-51 | FFCP PHASE1:Hg19::chr3:33686743..33686759,-#_5ae6d961fd4cd3f52fd763b96ddd3818 | p16@CLASP2 |
| 1.75e-51 | FFCP PHASE2:Hg19::chr3:33686743..33686759,-#_5ae6d961fd4cd3f52fd763b96ddd3818 | p16@CLASP2 |
| 3.3e-51 | FFCP PHASE1:Hg19::chr8:4852195..4852205,-#_23ecb09a9e87a6b8368a95ba48cd8269 | p13@CSMD1 |
| 3.3e-51 | FFCP PHASE2:Hg19::chr8:4852195..4852205,-#_23ecb09a9e87a6b8368a95ba48cd8269 | p13@CSMD1 |
| 2.05e-49 | FFCP PHASE2:Hg19::chr2:162273032..162273042,+#_0eb793ffde3f678a35322f7aa6031171 | p13@TBR1 |
| 2.05e-49 | FFCP PHASE1:Hg19::chr2:162273032..162273042,+#_0eb793ffde3f678a35322f7aa6031171 | p13@TBR1 |
| 3.21e-49 | FFCP PHASE2:Hg19::chr7:45113897..45113916,+#_d37aac7a6e71314ff2af96b8ee467023 | p@chr7:45113897..45113916, + |
| 3.21e-49 | FFCP PHASE1:Hg19::chr7:45113897..45113916,+#_d37aac7a6e71314ff2af96b8ee467023 | p@chr7:45113897..45113916, + |
| 5.27e-49 | FFCP PHASE2:Hg19::chr2:162273824..162273837,+#_b81452eb8d94510c52420d238e2423de | p16@TBR1 |
| 5.27e-49 | FFCP PHASE1:Hg19::chr2:162273824..162273837,+#_b81452eb8d94510c52420d238e2423de | p16@TBR1 |
| 9.36e-48 | FFCP PHASE2:Hg19::chr20:45980635..45980649,-#_86da6bdc41dc25784eede7ce1f65672f | p17@ZMYND8 |
| 9.36e-48 | FFCP PHASE1:Hg19::chr20:45980635..45980649,-#_86da6bdc41dc25784eede7ce1f65672f | p17@ZMYND8 |
| 1.03e-47 | FFCP PHASE2:Hg19::chr6:155537942..155537959,+#_940d9a07b36886799452cf6483e768c2 | p9@TIAM2 |
| 1.03e-47 | FFCP PHASE1:Hg19::chr6:155537942..155537959,+#_940d9a07b36886799452cf6483e768c2 | p9@TIAM2 |
| 2.7e-47 | FFCP PHASE2:Hg19::chr2:115200168..115200182,+#_46427b190f05c18c4e77297f9f985076 | p11@DPP10 |
| 2.7e-47 | FFCP PHASE1:Hg19::chr2:115200168..115200182,+#_46427b190f05c18c4e77297f9f985076 | p11@DPP10 |
| 1.58e-45 | FFCP PHASE2:Hg19::chrX:9881014..9881038,+#_dbb704bb27ca5b120c75418b3540aeda | p12@SHROOM2 |
| 1.58e-45 | FFCP PHASE1:Hg19::chrX:9881014..9881038,+#_dbb704bb27ca5b120c75418b3540aeda | p12@SHROOM2 |
| 1.9e-45 | FFCP PHASE2:Hg19::chr19:13617584..13617596,-#_eaf29186558f2e1835363e8c6fc4ee53 | p7@CACNA1A |
| 1.9e-45 | FFCP PHASE1:Hg19::chr19:13617584..13617596,-#_eaf29186558f2e1835363e8c6fc4ee53 | p7@CACNA1A |
| 1.99e-45 | FFCP PHASE2:Hg19::chr9:73728085..73728108,-#_35a6c9e25722470d9eba78e81ff7f48d | p@chr9:73728085..73728108, - |
| 1.99e-45 | FFCP PHASE1:Hg19::chr9:73728085..73728108,-#_35a6c9e25722470d9eba78e81ff7f48d | p@chr9:73728085..73728108, - |
| 2.81e-45 | FFCP PHASE2:Hg19::chr12:130303291..130303304,-#_47a96781972540626c0fc760146615cd | p@chr12:130303291..130303304, - |
| 2.81e-45 | FFCP PHASE1:Hg19::chr12:130303291..130303304,-#_47a96781972540626c0fc760146615cd | p@chr12:130303291..130303304, - |
| 2.81e-45 | FFCP PHASE2:Hg19::chr8:48758335..48758346,-#_47a96781972540626c0fc760146615cd | p@chr8:48758335..48758346, - |
| 2.81e-45 | FFCP PHASE1:Hg19::chr8:48758335..48758346,-#_47a96781972540626c0fc760146615cd | p@chr8:48758335..48758346, - |
| 2.81e-45 | FFCP PHASE1:Hg19::chr10:116850978..116851000,+#_47a96781972540626c0fc760146615cd | p@chr10:116850978..116851000, + |
| 2.81e-45 | FFCP PHASE2:Hg19::chr10:116850978..116851000,+#_47a96781972540626c0fc760146615cd | p@chr10:116850978..116851000, + |
| 4.44e-45 | FFCP PHASE2:Hg19::chr11:132897766..132897783,-#_8e83fed868768d0b0eef7e50a77f0784 | p@chr11:132897766..132897783, - |
| 4.44e-45 | FFCP PHASE1:Hg19::chr11:132897766..132897783,-#_8e83fed868768d0b0eef7e50a77f0784 | p@chr11:132897766..132897783, - |
| 5.45e-45 | FFCP PHASE2:Hg19::chr11:132845422..132845423,-#_6e5292c809bd7f9e96e21f1bc2035748 | p@chr11:132845422..132845423, - |
| 5.45e-45 | FFCP PHASE1:Hg19::chr11:132845422..132845423,-#_6e5292c809bd7f9e96e21f1bc2035748 | p@chr11:132845422..132845423, - |
| 6.33e-45 | FFCP PHASE1:Hg19::chr2:76412175..76412186,+#_ea4c0b74cd08262cb3316c7f96151e97 | p@chr2:76412175..76412186, + |
| 6.33e-45 | FFCP PHASE2:Hg19::chr2:76412175..76412186,+#_ea4c0b74cd08262cb3316c7f96151e97 | p@chr2:76412175..76412186, + |
| 6.33e-45 | FFCP PHASE2:Hg19::chr2:50149146..50149156,-#_ea4c0b74cd08262cb3316c7f96151e97 | p35@NRXN1 |
| 6.33e-45 | FFCP PHASE1:Hg19::chr2:50149146..50149156,-#_ea4c0b74cd08262cb3316c7f96151e97 | p35@NRXN1 |
| 8.23e-45 | FFCP PHASE1:Hg19::chr6:100441869..100441892,-#_86e08257086c0b3709304dc1614f682e | p3@MCHR2 |
| 8.23e-45 | FFCP PHASE2:Hg19::chr6:100441869..100441892,-#_86e08257086c0b3709304dc1614f682e | p3@MCHR2 |
| 8.55e-45 | FFCP PHASE1:Hg19::chr14:60212694..60212703,-#_fd00c4fea1f2be9a5dba2320b4ca01b4 | p@chr14:60212694..60212703, - |
| 8.55e-45 | FFCP PHASE2:Hg19::chr14:60212694..60212703,-#_fd00c4fea1f2be9a5dba2320b4ca01b4 | p@chr14:60212694..60212703, - |
| 1.56e-44 | FFCP PHASE1:Hg19::chr13:97152251..97152262,+#_810ccbfd26759f20f90f4613f5576cd4 | p@chr13:97152251..97152262, + |
| 1.56e-44 | FFCP PHASE2:Hg19::chr13:97152251..97152262,+#_810ccbfd26759f20f90f4613f5576cd4 | p@chr13:97152251..97152262, + |
| 9.22e-44 | FFCP PHASE1:Hg19::chr2:200335983..200335994,-#_f272a424ea4b76972c6b5699c5c4442b | p16@SATB2 |
| 9.22e-44 | FFCP PHASE2:Hg19::chr2:200335983..200335994,-#_f272a424ea4b76972c6b5699c5c4442b | p16@SATB2 |
| 4.49e-43 | FFCP PHASE2:Hg19::chr4:46995689..46995706,+#_130f194e7e2f14812f5e028f8e55dadb | p7@GABRB1 |
| 4.49e-43 | FFCP PHASE1:Hg19::chr4:46995689..46995706,+#_130f194e7e2f14812f5e028f8e55dadb | p7@GABRB1 |
| 4.9e-43 | FFCP PHASE1:Hg19::chr2:162273873..162273885,+#_e163ac2fa2af606c6a31d97bbf0efd76 | p14@TBR1 |
| 4.9e-43 | FFCP PHASE2:Hg19::chr2:162273873..162273885,+#_e163ac2fa2af606c6a31d97bbf0efd76 | p14@TBR1 |
| 5.34e-43 | FFCP PHASE2:Hg19::chr4:158142034..158142043,+#_2c5b83ed1a5ed8ccb3ea11498992822f | p10@GRIA2 |
| 5.34e-43 | FFCP PHASE1:Hg19::chr4:158142034..158142043,+#_2c5b83ed1a5ed8ccb3ea11498992822f | p10@GRIA2 |
| 6.24e-43 | FFCP PHASE1:Hg19::chr1:177140795..177140813,+#_e1b4c59e42dbcb4220ab0fdc1d2acd7f | p3@FAM5B |
| 6.24e-43 | FFCP PHASE2:Hg19::chr1:177140795..177140813,+#_e1b4c59e42dbcb4220ab0fdc1d2acd7f | p3@FAM5B |
| 6.95e-43 | FFCP PHASE2:Hg19::chr10:75632990..75633015,-#_40fb69f59247d391bb1d195bcdc85b20 | p@chr10:75632990..75633015, - |
| 6.95e-43 | FFCP PHASE1:Hg19::chr10:75632990..75633015,-#_40fb69f59247d391bb1d195bcdc85b20 | p@chr10:75632990..75633015, - |
| 7.58e-43 | FFCP PHASE2:Hg19::chr3:63428784..63428795,+#_1a53be3c362b86b1add2722ac77b5723 | p8@SYNPR |
| 7.58e-43 | FFCP PHASE1:Hg19::chr3:63428784..63428795,+#_1a53be3c362b86b1add2722ac77b5723 | p8@SYNPR |
| 9.85e-43 | FFCP PHASE1:Hg19::chr7:54610331..54610338,+#_58c2817a493fd1b268c6294d5806ae2e | p12@VSTM2A |
| 9.85e-43 | FFCP PHASE2:Hg19::chr7:54610331..54610338,+#_58c2817a493fd1b268c6294d5806ae2e | p12@VSTM2A |
| 1.07e-42 | FFCP PHASE2:Hg19::chr21:16999597..16999614,-#_a44d990cc44dcdd3cbe1f810f8eb56c5 | p@chr21:16999597..16999614, - |
| 1.07e-42 | FFCP PHASE2:Hg19::chr11:105481393..105481404,+#_a44d990cc44dcdd3cbe1f810f8eb56c5 | p10@GRIA4 |
| 1.07e-42 | FFCP PHASE1:Hg19::chr11:105481393..105481404,+#_a44d990cc44dcdd3cbe1f810f8eb56c5 | p10@GRIA4 |
| 1.07e-42 | FFCP PHASE1:Hg19::chr21:16999597..16999614,-#_a44d990cc44dcdd3cbe1f810f8eb56c5 | p@chr21:16999597..16999614, - |
| 1.64e-42 | FFCP PHASE2:Hg19::chr4:90692879..90692891,-#_7a681b46ee847385f7e4fc893903e204 | p@chr4:90692879..90692891, - |
| 1.64e-42 | FFCP PHASE1:Hg19::chr4:90692879..90692891,-#_7a681b46ee847385f7e4fc893903e204 | p@chr4:90692879..90692891, - |
| 1.83e-42 | FFCP PHASE1:Hg19::chr10:79383809..79383833,+#_7766299a8e8680ea455bd689babe9ddf | p@chr10:79383809..79383833, + |
| 1.83e-42 | FFCP PHASE2:Hg19::chr10:79383809..79383833,+#_7766299a8e8680ea455bd689babe9ddf | p@chr10:79383809..79383833, + |
| 2.03e-42 | FFCP PHASE1:Hg19::chr8:145555308..145555319,-#_e0fffb050fed5986ac40aaf08d025ec3 | p3@SCRT1 |
| 2.03e-42 | FFCP PHASE2:Hg19::chr8:145555308..145555319,-#_e0fffb050fed5986ac40aaf08d025ec3 | p3@SCRT1 |
| 2.52e-42 | FFCP PHASE1:Hg19::chr2:180725954..180725965,-#_8d665e89fe5d993b3e5d4f5f92a299d9 | p11@ZNF385B |
| 2.52e-42 | FFCP PHASE2:Hg19::chr2:180725954..180725965,-#_8d665e89fe5d993b3e5d4f5f92a299d9 | p11@ZNF385B |
| 5.31e-42 | FFCP PHASE1:Hg19::chr11:85430299..85430311,-#_3c3d3e039c0b9e196dc80cfc247a75c4 | p13@SYTL2 |
| 5.31e-42 | FFCP PHASE2:Hg19::chr11:85430299..85430311,-#_3c3d3e039c0b9e196dc80cfc247a75c4 | p13@SYTL2 |
| 7.31e-42 | FFCP PHASE1:Hg19::chr2:215275814..215275834,+#_bfe2b7db857e8a860c28f0e06e5ec036 | p1@VWC2L |
| 7.31e-42 | FFCP PHASE1:Hg19::chr8:4852499..4852508,-#_bfe2b7db857e8a860c28f0e06e5ec036 | p15@CSMD1 |
| 7.31e-42 | FFCP PHASE2:Hg19::chr2:215275814..215275834,+#_bfe2b7db857e8a860c28f0e06e5ec036 | p1@VWC2L |
| 7.31e-42 | FFCP PHASE2:Hg19::chr8:4852499..4852508,-#_bfe2b7db857e8a860c28f0e06e5ec036 | p15@CSMD1 |
| 8.21e-42 | FFCP PHASE2:Hg19::chr2:162273893..162273908,+#_f3bb1f557ebeafecfc3d47b54cec8e5f | p12@TBR1 |
| 8.21e-42 | FFCP PHASE1:Hg19::chr2:162273893..162273908,+#_f3bb1f557ebeafecfc3d47b54cec8e5f | p12@TBR1 |
| 1.36e-41 | FFCP PHASE2:Hg19::chr17:36757284..36757327,+#_45b61c1ed388c507028c5b79ebd91f2f | p@chr17:36757284..36757327, + |
| 1.36e-41 | FFCP PHASE1:Hg19::chr17:36757284..36757327,+#_45b61c1ed388c507028c5b79ebd91f2f | p@chr17:36757284..36757327, + |
| 5.67e-41 | FFCP PHASE1:Hg19::chr6:100442077..100442114,-#_9f0e370043f33c78df2b95a6e57d7e57 | p1@MCHR2 |
| 5.67e-41 | FFCP PHASE2:Hg19::chr6:100442077..100442114,-#_9f0e370043f33c78df2b95a6e57d7e57 | p1@MCHR2 |
| 9.35e-41 | FFCP PHASE1:Hg19::chr5:169931156..169931170,+#_3cd22720e53b7ed8b1f94a579a7ebe8c | p8@KCNIP1 |
| 9.35e-41 | FFCP PHASE2:Hg19::chr5:169931156..169931170,+#_3cd22720e53b7ed8b1f94a579a7ebe8c | p8@KCNIP1 |
