UBERON:0001204: Difference between revisions
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|located_in= | |located_in= | ||
|name=mucosa of small intestine | |name=mucosa of small intestine | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002108;;UBERON:0001168;;UBERON:0001242;;UBERON:0002108 | |part_of=UBERON:0002108;;UBERON:0001168;;UBERON:0001242;;UBERON:0002108 | ||
Latest revision as of 17:16, 12 September 2014
| Name: | mucosa of small intestine | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A mucosa that is part of a small intestine [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"mucosa of organ of small bowel" EXACT [OBOL:automatic] "mucosa of organ of small intestine" EXACT [OBOL:automatic] "mucosa of small bowel" EXACT [OBOL:automatic] "mucous membrane of small bowel" EXACT [OBOL:automatic] "mucous membrane of small intestine" EXACT [] "organ mucosa of small bowel" EXACT [OBOL:automatic] "organ mucosa of small intestine" EXACT [OBOL:automatic] "small bowel mucosa" EXACT [OBOL:automatic] "small bowel mucosa of organ" EXACT [OBOL:automatic] "small bowel mucous membrane" EXACT [OBOL:automatic] "small bowel organ mucosa" EXACT [OBOL:automatic] "small intestinal mucosa" EXACT [] "small intestine mucosa" EXACT [] "small intestine mucosa of organ" EXACT [OBOL:automatic] "small intestine mucous membrane" EXACT [] "small intestine organ mucosa" EXACT [OBOL:automatic] "tunica mucosa (intestinum tenue)" EXACT [] "tunica mucosa intestini tenuis" EXACT [FMA:14933, FMA:TA] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_14933-MA_0002686 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0001242(intestinal mucosa) |
|---|---|
| part_of: | UBERON:0002108(small intestine),UBERON:0001168(wall of small intestine),UBERON:0001242(intestinal mucosa),UBERON:0002108(small intestine) |
Children
| is a: | UBERON:0000331 (ileal mucosa) |
|---|---|
| part of: | UBERON:0001902 (epithelium of small intestine) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 10252-104B9 (Ileum epithelium, pool1)
- 10253-104C1 (Ileum epithelium, pool2)
- 10254-104C2
- 10255-104C3
- 10256-104C4
- 10257-104C5
- 10258-104C6
- 10259-104C7
- 10260-104C8 (Ileum epithelium, treated with RANKL, day03, pool3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001204 (mucosa of small intestine), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE1:Mm9::chr4:5463968..5463972,+#_03cc7190c5f56f9d5e0907757783ea40 | p@chr4:5463968..5463972, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr16:32477713..32477720,-#_03cc7190c5f56f9d5e0907757783ea40 | p@chr16:32477713..32477720, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr11:43412172..43412177,-#_03cc7190c5f56f9d5e0907757783ea40 | p@chr11:43412172..43412177, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr16:32477713..32477720,-#_03cc7190c5f56f9d5e0907757783ea40 | p@chr16:32477713..32477720, - |
| 1.58e-86 | FFCP PHASE2:Mm9::chr4:5463968..5463972,+#_03cc7190c5f56f9d5e0907757783ea40 | p@chr4:5463968..5463972, + |
| 1.58e-86 | FFCP PHASE1:Mm9::chr11:43412172..43412177,-#_03cc7190c5f56f9d5e0907757783ea40 | p@chr11:43412172..43412177, - |
| 1.33e-65 | FFCP PHASE1:Mm9::chr11:43412139..43412149,-#_beb62b95f21d3b32237e8f7fb80e4d8a | p@chr11:43412139..43412149, - |
| 1.33e-65 | FFCP PHASE2:Mm9::chr11:43412139..43412149,-#_beb62b95f21d3b32237e8f7fb80e4d8a | p@chr11:43412139..43412149, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:70621810..70621814,-#_2c26f2a1b8a3832f58fab5f27ea65d8b | p@chr15:70621810..70621814, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31350252..31350259,-#_2c26f2a1b8a3832f58fab5f27ea65d8b | p13@Slc5a6 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:43412215..43412219,-#_2c26f2a1b8a3832f58fab5f27ea65d8b | p@chr11:43412215..43412219, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:80191466..80191470,+#_2c26f2a1b8a3832f58fab5f27ea65d8b | p@chr3:80191466..80191470, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31350252..31350259,-#_2c26f2a1b8a3832f58fab5f27ea65d8b | p13@Slc5a6 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:43412215..43412219,-#_2c26f2a1b8a3832f58fab5f27ea65d8b | p@chr11:43412215..43412219, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr3:80191466..80191470,+#_2c26f2a1b8a3832f58fab5f27ea65d8b | p@chr3:80191466..80191470, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:127165632..127165636,+#_2c26f2a1b8a3832f58fab5f27ea65d8b | p@chr10:127165632..127165636, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:70621810..70621814,-#_2c26f2a1b8a3832f58fab5f27ea65d8b | p@chr15:70621810..70621814, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:127165632..127165636,+#_2c26f2a1b8a3832f58fab5f27ea65d8b | p@chr10:127165632..127165636, + |
| 4.9e-53 | FFCP PHASE2:Mm9::chr1:174032230..174032242,+#_56b95b49e037e54c531ee79cd6cfc11a | p@chr1:174032230..174032242, + |
| 4.9e-53 | FFCP PHASE1:Mm9::chr1:174032230..174032242,+#_56b95b49e037e54c531ee79cd6cfc11a | p@chr1:174032230..174032242, + |
| 1.1e-52 | FFCP PHASE1:Mm9::chr1:123242799..123242804,-#_1063802031600e7dcc9b569cbca83497 | p@chr1:123242799..123242804, - |
| 1.1e-52 | FFCP PHASE2:Mm9::chr1:123242799..123242804,-#_1063802031600e7dcc9b569cbca83497 | p@chr1:123242799..123242804, - |
| 5.51e-52 | FFCP PHASE1:Mm9::chr6:48417827..48417837,+#_4d8fa0f8fc144b7a401678f52d48655a | p@chr6:48417827..48417837, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr6:48417827..48417837,+#_4d8fa0f8fc144b7a401678f52d48655a | p@chr6:48417827..48417837, + |
| 5.51e-52 | FFCP PHASE1:Mm9::chr9:7692339..7692366,+#_4d8fa0f8fc144b7a401678f52d48655a | p@chr9:7692339..7692366, + |
| 5.51e-52 | FFCP PHASE2:Mm9::chr9:7692339..7692366,+#_4d8fa0f8fc144b7a401678f52d48655a | p@chr9:7692339..7692366, + |
| 1.18e-44 | FFCP PHASE1:Mm9::chr1:174032263..174032278,+#_aa49c68dda190c0dcdcca4527a29cc54 | p@chr1:174032263..174032278, + |
| 1.18e-44 | FFCP PHASE2:Mm9::chr1:174032263..174032278,+#_aa49c68dda190c0dcdcca4527a29cc54 | p@chr1:174032263..174032278, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chr11:76730372..76730376,+#_1fb9e16da24d5cba73909d5e4bb6bda3 | p@chr11:76730372..76730376, + |
| 1.66e-44 | FFCP PHASE1:Mm9::chr11:76730372..76730376,+#_1fb9e16da24d5cba73909d5e4bb6bda3 | p@chr11:76730372..76730376, + |
| 2.33e-44 | FFCP PHASE1:Mm9::chr3:65610528..65610533,+#_da265f75cb76beaafd6d42229b2c8646 | p@chr3:65610528..65610533, + |
| 2.33e-44 | FFCP PHASE2:Mm9::chr19:6114448..6114456,+#_da265f75cb76beaafd6d42229b2c8646 | p@chr19:6114448..6114456, + |
| 2.33e-44 | FFCP PHASE1:Mm9::chr19:6114448..6114456,+#_da265f75cb76beaafd6d42229b2c8646 | p@chr19:6114448..6114456, + |
| 2.33e-44 | FFCP PHASE2:Mm9::chr3:65610528..65610533,+#_da265f75cb76beaafd6d42229b2c8646 | p@chr3:65610528..65610533, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr3:6169801..6169806,-#_aad4392c0dd1938125dead0cad784e5e | p@chr3:6169801..6169806, - |
| 1.7e-39 | FFCP PHASE1:Mm9::chr3:6169801..6169806,-#_aad4392c0dd1938125dead0cad784e5e | p@chr3:6169801..6169806, - |
| 2.66e-39 | FFCP PHASE2:Mm9::chr19:6112940..6112946,+#_c3ded0ee8763d382f29a40af4ab4ab56 | p@chr19:6112940..6112946, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr19:6112940..6112946,+#_c3ded0ee8763d382f29a40af4ab4ab56 | p@chr19:6112940..6112946, + |
| 4.15e-39 | FFCP PHASE1:Mm9::chr5:31350231..31350240,-#_2b3dff19e728d3bfb1ed75f613a2f3ca | p12@Slc5a6 |
| 4.15e-39 | FFCP PHASE2:Mm9::chr5:31350231..31350240,-#_2b3dff19e728d3bfb1ed75f613a2f3ca | p12@Slc5a6 |
| 1.17e-38 | FFCP PHASE1:Mm9::chr11:43412071..43412093,+#_ca5fde3bc8832185e351ccd858747afb | p@chr11:43412071..43412093, + |
| 1.17e-38 | FFCP PHASE2:Mm9::chr11:43412071..43412093,+#_ca5fde3bc8832185e351ccd858747afb | p@chr11:43412071..43412093, + |
| 1.56e-38 | FFCP PHASE1:Mm9::chr3:103636485..103636490,+#_f1ec9f89efa74f22e5d30e89fb7ee7be | p3@Bcl2l15 |
| 1.56e-38 | FFCP PHASE2:Mm9::chr3:103636485..103636490,+#_f1ec9f89efa74f22e5d30e89fb7ee7be | p3@Bcl2l15 |
| 3.67e-34 | FFCP PHASE2:Mm9::chr11:43412170..43412191,+#_fa58b2e2d41221f9b92f835a6842a841 | p@chr11:43412170..43412191, + |
| 3.67e-34 | FFCP PHASE1:Mm9::chr11:43412170..43412191,+#_fa58b2e2d41221f9b92f835a6842a841 | p@chr11:43412170..43412191, + |
| 4.74e-34 | FFCP PHASE1:Mm9::chr11:43409580..43409591,+#_fb930ad7f24f90495fd6d42028fc426f | p@chr11:43409580..43409591, + |
| 4.74e-34 | FFCP PHASE2:Mm9::chr11:43409580..43409591,+#_fb930ad7f24f90495fd6d42028fc426f | p@chr11:43409580..43409591, + |
| 6.12e-34 | FFCP PHASE2:Mm9::chr6:40578587..40578594,+#_be83d4e8bcc0c7e67ddb9b3b72d959c4 | p4@Mgam |
| 6.12e-34 | FFCP PHASE1:Mm9::chr6:40578587..40578594,+#_be83d4e8bcc0c7e67ddb9b3b72d959c4 | p4@Mgam |
| 1.02e-33 | FFCP PHASE1:Mm9::chr2:72453221..72453226,-#_d70557e30810dde86b12ad12c9d34914 | p@chr2:72453221..72453226, - |
| 1.02e-33 | FFCP PHASE2:Mm9::chr2:72453221..72453226,-#_d70557e30810dde86b12ad12c9d34914 | p@chr2:72453221..72453226, - |
| 1.31e-33 | FFCP PHASE1:Mm9::chr19:6112924..6112937,+#_6bf994547c12a3e03a33d6472d9da99d | p@chr19:6112924..6112937, + |
| 1.31e-33 | FFCP PHASE2:Mm9::chr6:78323455..78323458,-#_6bf994547c12a3e03a33d6472d9da99d | p@chr6:78323455..78323458, - |
| 1.31e-33 | FFCP PHASE1:Mm9::chr6:78323455..78323458,-#_6bf994547c12a3e03a33d6472d9da99d | p@chr6:78323455..78323458, - |
| 1.31e-33 | FFCP PHASE2:Mm9::chr19:6112924..6112937,+#_6bf994547c12a3e03a33d6472d9da99d | p@chr19:6112924..6112937, + |
| 2.89e-30 | FFCP PHASE1:Mm9::chr4:138388796..138388811,+#_44acd2dcb48f5314d15670479de05fcf | p3@ENSMUST00000147728 |
| 2.89e-30 | FFCP PHASE2:Mm9::chr4:138388796..138388811,+#_44acd2dcb48f5314d15670479de05fcf | p3@ENSMUST00000147728 |
| 4.03e-30 | FFCP PHASE1:Mm9::chr17:34484746..34484750,+#_496c9eacf5e714c78b250ea563efb1cb | p@chr17:34484746..34484750, + |
| 4.03e-30 | FFCP PHASE1:Mm9::chr10:128109355..128109365,-#_496c9eacf5e714c78b250ea563efb1cb | p@chr10:128109355..128109365, - |
| 4.03e-30 | FFCP PHASE2:Mm9::chr10:128109355..128109365,-#_496c9eacf5e714c78b250ea563efb1cb | p@chr10:128109355..128109365, - |
| 4.03e-30 | FFCP PHASE2:Mm9::chr17:34484746..34484750,+#_496c9eacf5e714c78b250ea563efb1cb | p@chr17:34484746..34484750, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr1:40187318..40187321,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr1:40187318..40187321, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr9:50047835..50047836,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr9:50047835..50047836, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chrX:83991903..83991905,-#_a1a53edd03506264a54fd571c0b6df81 | p@chrX:83991903..83991905, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr17:43614030..43614038,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr17:43614030..43614038, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr1:40187318..40187321,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr1:40187318..40187321, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr11:106410939..106410940,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr11:106410939..106410940, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr10:31111154..31111155,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr10:31111154..31111155, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr3:20879214..20879216,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr3:20879214..20879216, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr11:106410939..106410940,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr11:106410939..106410940, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr10:31111154..31111155,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr10:31111154..31111155, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr13:55874724..55874725,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr13:55874724..55874725, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr13:55874724..55874725,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr13:55874724..55874725, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr8:5085607..5085611,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr8:5085607..5085611, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr18:58306021..58306022,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr18:58306021..58306022, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr9:50047835..50047836,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr9:50047835..50047836, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr11:27472982..27472983,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr11:27472982..27472983, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr11:9039303..9039304,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr11:9039303..9039304, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr8:27020687..27020691,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr8:27020687..27020691, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr11:27472982..27472983,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr11:27472982..27472983, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr8:5085607..5085611,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr8:5085607..5085611, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr17:4030939..4030944,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr17:4030939..4030944, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr18:55496010..55496011,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr18:55496010..55496011, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr13:17402712..17402716,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr13:17402712..17402716, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr12:103615373..103615374,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr12:103615373..103615374, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chrX:83991903..83991905,-#_a1a53edd03506264a54fd571c0b6df81 | p@chrX:83991903..83991905, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr13:17402712..17402716,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr13:17402712..17402716, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr8:27020687..27020691,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr8:27020687..27020691, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr11:9039303..9039304,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr11:9039303..9039304, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr17:4030939..4030944,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr17:4030939..4030944, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr18:58306021..58306022,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr18:58306021..58306022, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chrX:68120720..68120723,-#_a1a53edd03506264a54fd571c0b6df81 | p@chrX:68120720..68120723, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr12:103615373..103615374,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr12:103615373..103615374, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr4:72564746..72564750,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr4:72564746..72564750, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr3:20879214..20879216,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr3:20879214..20879216, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chrX:68120720..68120723,-#_a1a53edd03506264a54fd571c0b6df81 | p@chrX:68120720..68120723, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr18:55496010..55496011,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr18:55496010..55496011, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr4:72564746..72564750,-#_a1a53edd03506264a54fd571c0b6df81 | p@chr4:72564746..72564750, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr17:43614030..43614038,+#_a1a53edd03506264a54fd571c0b6df81 | p@chr17:43614030..43614038, + |
