UBERON:0000163: Difference between revisions
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|located_in= | |located_in= | ||
|name=embryonic cloaca | |name=embryonic cloaca | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0000922;;UBERON:0001008;;UBERON:0012361 | |part_of=UBERON:0000922;;UBERON:0001008;;UBERON:0012361 | ||
Latest revision as of 17:07, 12 September 2014
| Name: | embryonic cloaca | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Structure in the development of the urinary and reproductive organs[WP]. endoderm-lined chamber into which the hidgut and allantois empty in early embryos[MP]." [MP:0010115, Wikipedia:Cloaca_(embryology)] | ||
| Xrefs: |
| ||
| Synonyms: | "cloaca" RELATED SENSU [] | ||
| Comments: | compare UBERON:0000162 cloaca |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000162(cloaca),UBERON:0002050(embryonic structure),UBERON:0006554(urinary system structure) |
|---|---|
| develops_from: | UBERON:0003064(intermediate mesoderm) |
| part_of: | UBERON:0000922(embryo),UBERON:0001008(renal system),UBERON:0012361(internal anal region) |
Children
| part of: | UBERON:0000164 (primitive urogenital sinus),UBERON:0009846 (embryonic cloacal epithelium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000163 (embryonic cloaca), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 4.58e-44 | FFCP PHASE1:Mm9::chr1:132699659..132699668,+#_e316cf67cdea70cfd5faed19ab5c809a | p@chr1:132699659..132699668, + |
| 4.58e-44 | FFCP PHASE2:Mm9::chr1:132699659..132699668,+#_e316cf67cdea70cfd5faed19ab5c809a | p@chr1:132699659..132699668, + |
| 1.7e-39 | FFCP PHASE1:Mm9::chr9:96425825..96425834,-#_e3e0ddc85fd10543e181f235533b6410 | p@chr9:96425825..96425834, - |
| 1.7e-39 | FFCP PHASE1:Mm9::chr7:114836650..114836663,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr7:114836650..114836663, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr9:96425825..96425834,-#_e3e0ddc85fd10543e181f235533b6410 | p@chr9:96425825..96425834, - |
| 1.7e-39 | FFCP PHASE1:Mm9::chr9:96425983..96425992,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr9:96425983..96425992, + |
| 1.7e-39 | FFCP PHASE1:Mm9::chr15:58237385..58237400,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr15:58237385..58237400, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr9:96425983..96425992,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr9:96425983..96425992, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr15:58237385..58237400,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr15:58237385..58237400, + |
| 1.7e-39 | FFCP PHASE2:Mm9::chr7:114836650..114836663,+#_e3e0ddc85fd10543e181f235533b6410 | p@chr7:114836650..114836663, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr6:124520322..124520333,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p3@C1rb |
| 2.66e-39 | FFCP PHASE1:Mm9::chr6:124520322..124520333,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p3@C1rb |
| 2.66e-39 | FFCP PHASE2:Mm9::chr6:124520368..124520379,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p4@C1rb |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:28922549..28922561,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28922549..28922561, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr9:120464717..120464741,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:120464717..120464741, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr9:120464717..120464741,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:120464717..120464741, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr5:120136866..120136874,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr5:120136866..120136874, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:28924794..28924814,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28924794..28924814, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:28914450..28914477,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p2@9530053A07Rik |
| 2.66e-39 | FFCP PHASE2:Mm9::chr6:42547567..42547580,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p4@Fam115e |
| 2.66e-39 | FFCP PHASE1:Mm9::chr9:120464756..120464765,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:120464756..120464765, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr9:120464756..120464765,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:120464756..120464765, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr5:120136866..120136874,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr5:120136866..120136874, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr9:36337031..36337049,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:36337031..36337049, - |
| 2.66e-39 | FFCP PHASE1:Mm9::chr6:124520368..124520379,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p4@C1rb |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:28914450..28914477,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p2@9530053A07Rik |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:28914478..28914498,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p3@9530053A07Rik |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:28900349..28900364,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28900349..28900364, - |
| 2.66e-39 | FFCP PHASE1:Mm9::chr6:42547567..42547580,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p4@Fam115e |
| 2.66e-39 | FFCP PHASE1:Mm9::chr19:11353922..11353934,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr19:11353922..11353934, - |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:28922549..28922561,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28922549..28922561, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr19:11353922..11353934,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr19:11353922..11353934, - |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:28914478..28914498,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p3@9530053A07Rik |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:55028037..55028075,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:55028037..55028075, + |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:28900349..28900364,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28900349..28900364, - |
| 2.66e-39 | FFCP PHASE1:Mm9::chr7:28924794..28924814,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:28924794..28924814, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr7:55028037..55028075,+#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr7:55028037..55028075, + |
| 2.66e-39 | FFCP PHASE2:Mm9::chr9:36337031..36337049,-#_074dff01ee6bc89ae62c73e7e0bd01b3 | p@chr9:36337031..36337049, - |
| 2.02e-32 | FFCP PHASE1:Hg19::chr10:91567075..91567084,+#_6b1e331f45efc4f4c3a4057eba0ce019 | p@chr10:91567075..91567084, + |
| 2.02e-32 | FFCP PHASE2:Hg19::chr10:91567053..91567066,+#_6b1e331f45efc4f4c3a4057eba0ce019 | p@chr10:91567053..91567066, + |
| 2.02e-32 | FFCP PHASE2:Hg19::chr10:91567075..91567084,+#_6b1e331f45efc4f4c3a4057eba0ce019 | p@chr10:91567075..91567084, + |
| 2.02e-32 | FFCP PHASE1:Hg19::chr10:91567053..91567066,+#_6b1e331f45efc4f4c3a4057eba0ce019 | p@chr10:91567053..91567066, + |
| 4.03e-30 | FFCP PHASE1:Mm9::chr3:92288406..92288413,-#_6ff33442481e73ce0132f7e10c0ff600 | p@chr3:92288406..92288413, - |
| 4.03e-30 | FFCP PHASE2:Mm9::chr7:114836670..114836681,+#_6ff33442481e73ce0132f7e10c0ff600 | p@chr7:114836670..114836681, + |
| 4.03e-30 | FFCP PHASE1:Mm9::chr7:31397780..31397790,-#_6ff33442481e73ce0132f7e10c0ff600 | p3@Upk1a |
| 4.03e-30 | FFCP PHASE2:Mm9::chr14:32955207..32955211,+#_6ff33442481e73ce0132f7e10c0ff600 | p1@Msmb |
| 4.03e-30 | FFCP PHASE1:Mm9::chr14:32955207..32955211,+#_6ff33442481e73ce0132f7e10c0ff600 | p1@Msmb |
| 4.03e-30 | FFCP PHASE1:Mm9::chr7:114836670..114836681,+#_6ff33442481e73ce0132f7e10c0ff600 | p@chr7:114836670..114836681, + |
| 4.03e-30 | FFCP PHASE2:Mm9::chr7:31397780..31397790,-#_6ff33442481e73ce0132f7e10c0ff600 | p3@Upk1a |
| 4.03e-30 | FFCP PHASE2:Mm9::chr3:92288406..92288413,-#_6ff33442481e73ce0132f7e10c0ff600 | p@chr3:92288406..92288413, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr11:100107526..100107540,-#_5ee69073d950a70efac9795692a1081b | p@chr11:100107526..100107540, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr8:126864466..126864469,+#_5ee69073d950a70efac9795692a1081b | p@chr8:126864466..126864469, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr10:75355747..75355754,-#_5ee69073d950a70efac9795692a1081b | p@chr10:75355747..75355754, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr9:7699504..7699515,+#_5ee69073d950a70efac9795692a1081b | p@chr9:7699504..7699515, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr9:109794961..109794968,-#_5ee69073d950a70efac9795692a1081b | p@chr9:109794961..109794968, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr1:72981474..72981498,+#_5ee69073d950a70efac9795692a1081b | p@chr1:72981474..72981498, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr19:34791339..34791346,-#_5ee69073d950a70efac9795692a1081b | p@chr19:34791339..34791346, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr4:102102677..102102684,+#_5ee69073d950a70efac9795692a1081b | p@chr4:102102677..102102684, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr2:36098306..36098309,+#_5ee69073d950a70efac9795692a1081b | p5@Ptgs1 |
| 5.61e-30 | FFCP PHASE1:Mm9::chr2:80164541..80164545,+#_5ee69073d950a70efac9795692a1081b | p@chr2:80164541..80164545, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chrX:75093387..75093390,-#_5ee69073d950a70efac9795692a1081b | p@chrX:75093387..75093390, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr16:20188895..20188904,+#_5ee69073d950a70efac9795692a1081b | p@chr16:20188895..20188904, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr9:122970758..122970759,+#_5ee69073d950a70efac9795692a1081b | p@chr9:122970758..122970759, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:42547389..42547396,-#_5ee69073d950a70efac9795692a1081b | p14@Fam115e |
| 5.61e-30 | FFCP PHASE1:Mm9::chr2:137020090..137020093,+#_5ee69073d950a70efac9795692a1081b | p@chr2:137020090..137020093, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr9:7699504..7699515,+#_5ee69073d950a70efac9795692a1081b | p@chr9:7699504..7699515, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr15:36485068..36485103,-#_5ee69073d950a70efac9795692a1081b | p@chr15:36485068..36485103, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr4:152405146..152405150,+#_5ee69073d950a70efac9795692a1081b | p@chr4:152405146..152405150, + |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:54242736..54242738,-#_5ee69073d950a70efac9795692a1081b | p@chr6:54242736..54242738, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42543996..42544003,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42543996..42544003, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr4:122366201..122366206,-#_5ee69073d950a70efac9795692a1081b | p@chr4:122366201..122366206, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:42551615..42551622,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42551615..42551622, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr15:101506878..101506897,-#_5ee69073d950a70efac9795692a1081b | p@chr15:101506878..101506897, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr11:100065595..100065616,-#_5ee69073d950a70efac9795692a1081b | p@chr11:100065595..100065616, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42536469..42536478,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42536469..42536478, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr4:152405146..152405150,+#_5ee69073d950a70efac9795692a1081b | p@chr4:152405146..152405150, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr17:24172292..24172300,+#_5ee69073d950a70efac9795692a1081b | p@chr17:24172292..24172300, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42536000..42536005,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42536000..42536005, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr16:20186617..20186622,+#_5ee69073d950a70efac9795692a1081b | p@chr16:20186617..20186622, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chrX:75093387..75093390,-#_5ee69073d950a70efac9795692a1081b | p@chrX:75093387..75093390, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42548966..42548969,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42548966..42548969, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:42543996..42544003,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42543996..42544003, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr18:44429795..44429800,+#_5ee69073d950a70efac9795692a1081b | p3@Npy6r |
| 5.61e-30 | FFCP PHASE1:Mm9::chr12:66314493..66314501,-#_5ee69073d950a70efac9795692a1081b | p1@uc007nrj.1 |
| 5.61e-30 | FFCP PHASE2:Mm9::chr16:20188882..20188884,+#_5ee69073d950a70efac9795692a1081b | p@chr16:20188882..20188884, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42547401..42547411,-#_5ee69073d950a70efac9795692a1081b | p9@Fam115e |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42543450..42543455,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42543450..42543455, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr16:96752893..96752921,+#_5ee69073d950a70efac9795692a1081b | p@chr16:96752893..96752921, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr11:100108943..100108977,-#_5ee69073d950a70efac9795692a1081b | p@chr11:100108943..100108977, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr7:123747566..123747567,+#_5ee69073d950a70efac9795692a1081b | p@chr7:123747566..123747567, + |
| 5.61e-30 | FFCP PHASE1:Mm9::chr6:42537176..42537182,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42537176..42537182, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr5:86802562..86802592,-#_5ee69073d950a70efac9795692a1081b | p6@Tmprss11d |
| 5.61e-30 | FFCP PHASE2:Mm9::chr9:122970904..122970907,-#_5ee69073d950a70efac9795692a1081b | p@chr9:122970904..122970907, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr18:73894503..73894506,-#_5ee69073d950a70efac9795692a1081b | p@chr18:73894503..73894506, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr12:114453231..114453265,-#_5ee69073d950a70efac9795692a1081b | p@chr12:114453231..114453265, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr1:37769602..37769611,-#_5ee69073d950a70efac9795692a1081b | p@chr1:37769602..37769611, - |
| 5.61e-30 | FFCP PHASE1:Mm9::chr12:93026806..93026816,-#_5ee69073d950a70efac9795692a1081b | p12@Ston2 |
| 5.61e-30 | FFCP PHASE2:Mm9::chr6:42535984..42535996,-#_5ee69073d950a70efac9795692a1081b | p@chr6:42535984..42535996, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr9:36341608..36341609,-#_5ee69073d950a70efac9795692a1081b | p@chr9:36341608..36341609, - |
| 5.61e-30 | FFCP PHASE2:Mm9::chr11:100107430..100107473,-#_5ee69073d950a70efac9795692a1081b | p@chr11:100107430..100107473, - |
