DOID:77: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=gastrointestinal system disease | |name=gastrointestinal system disease | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:52, 12 September 2014
| Name: | gastrointestinal system disease | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A disease of anatomical entity that is located_in the gastrointestinal tract." [url:http://en.wikipedia.org/wiki/Human_gastrointestinal_tract] | ||
| Xrefs: |
| ||
| Synonyms: |
"alimentary system disease" EXACT [] "digestive system disorder" EXACT [] "Gastroenteropathy" EXACT [SNOMEDCT_2005_07_31:25374005] "gastrointestinal disease" EXACT [] "gastrointestinal disorder" EXACT [CSP2005:1248-3545] "GIT disease" EXACT [SNOMEDCT_2005_07_31:53619000] | ||
| Alt_id: |
DOID:27 DOID:944 |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:7(disease of anatomical entity) |
|---|
Children
| is a: | DOID:3118 (hepatobiliary disease),DOID:403 (mouth disease) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10578-108C2
- 10579-108C3
- 10582-108C6
- 11921-125H4 (Fibroblast - Gingival, donor6 (aggressive periodontitis))
- 11923-125H6 (Fibroblast - Gingival, donor7 (aggressive periodontitis))
- 11925-125H8 (Fibroblast - Gingival, donor8 (chronic periodontitis))
- 11928-125I2 (Fibroblast - Gingival, donor10 (periodontitis))
Mouse (Mus musculus)
- 10578-108C2
- 10579-108C3
- 10582-108C6
- 11921-125H4 (Fibroblast - Gingival, donor6 (aggressive periodontitis))
- 11923-125H6 (Fibroblast - Gingival, donor7 (aggressive periodontitis))
- 11925-125H8 (Fibroblast - Gingival, donor8 (chronic periodontitis))
- 11928-125I2 (Fibroblast - Gingival, donor10 (periodontitis))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:77 (gastrointestinal system disease), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results
