DOID:2671

Name:	transitional cell carcinoma
Namespace:	FANTOM
Definition:	"A carcinoma that derives_from transitional epithelial cells." [url:http://en.wikipedia.org/wiki/Transitional_cell_carcinoma]
Xrefs:	links: MSH:D002295 NCI:C2930 NCI:C4030 SNOMEDCT_2010_1_31:118287003 SNOMEDCT_2010_1_31:189576006 SNOMEDCT_2010_1_31:27090000 UMLS_CUI:C0007138 UMLS_CUI:C0334265
Synonyms:	"transitional carcinoma" EXACT [NCI2004_11_17:C2930] "transitional cell carcinoma" EXACT [CSP2005:2000-9838] "transitional cell carcinoma (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:27090000] "transitional cell carcinoma NOS (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:189576006] "transitional cell carcinoma of the urinary tract" EXACT [NCI2004_11_17:C4030] "transitional cell neoplasm" RELATED [] "transitional cell neoplasm (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:118287003] "transitional cell tumor" EXACT [NCI2004_11_17:C6783]
Alt_id:	DOID:3995

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	DOID:305(carcinoma)

Children

is a:	FF:10707-109H5 (transitional cell carcinoma cell line:Hs 769.T)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

• 10707-109H5 (transitional cell carcinoma cell line:Hs 769.T)

Mouse (Mus musculus)

• 10707-109H5 (transitional cell carcinoma cell line:Hs 769.T)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:2671 (transitional cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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No analysis results