DOID:17: Difference between revisions
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|located_in= | |located_in= | ||
|name=musculoskeletal system disease | |name=musculoskeletal system disease | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:49, 12 September 2014
| Name: | musculoskeletal system disease | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Xrefs: |
| ||
| Synonyms: |
"disorder of musculoskeletal system (disorder)" EXACT [SNOMEDCT_2005_07_31:928000] "Musculoskeletal disease" EXACT [MTH:NOCODE] "musculoskeletal disorder" EXACT [CSP2005:4000-0257] "Musuloskeletal disease" EXACT [SNOMEDCT_2005_07_31:268047003] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:7(disease of anatomical entity) |
|---|
Children
| is a: | DOID:0080000 (muscular disease),DOID:65 (connective tissue disease) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10576-108B9
- 11556-120C8 (Fibroblast - skin dystrophia myotonica, donor1)
- 11557-120C9 (Fibroblast - skin dystrophia myotonica, donor2)
- 11560-120D3 (Fibroblast - skin dystrophia myotonica, donor3)
- 14306-155C4
- 14307-155C5
- 14308-155C6 (Fibroblast - skin dystrophia myotonica, donor3 (nuclear fraction))
- 14327-155E7
- 14328-155E8
- 14329-155E9 (Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction))
Mouse (Mus musculus)
- 10576-108B9
- 11556-120C8 (Fibroblast - skin dystrophia myotonica, donor1)
- 11557-120C9 (Fibroblast - skin dystrophia myotonica, donor2)
- 11560-120D3 (Fibroblast - skin dystrophia myotonica, donor3)
- 14306-155C4
- 14307-155C5
- 14308-155C6 (Fibroblast - skin dystrophia myotonica, donor3 (nuclear fraction))
- 14327-155E7
- 14328-155E8
- 14329-155E9 (Fibroblast - skin dystrophia myotonica, donor1 (nuclear fraction))
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:17 (musculoskeletal system disease), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.5e-156 | FFCP PHASE2:Hg19::chr15:33180439..33180446,-#_22fbcf3d879775fdc29d6b07b0f7ae5d | p@chr15:33180439..33180446, - |
| 1.5e-156 | FFCP PHASE1:Hg19::chr15:33180439..33180446,-#_22fbcf3d879775fdc29d6b07b0f7ae5d | p@chr15:33180439..33180446, - |
| 6.23e-66 | FFCP PHASE1:Hg19::chr13:24044226..24044237,+#_f4fd8163cdfba1f9c83d1fb37f379120 | p1@LINC00327 |
| 6.23e-66 | FFCP PHASE2:Hg19::chr13:24044226..24044237,+#_f4fd8163cdfba1f9c83d1fb37f379120 | p1@LINC00327 |
| 3.99e-52 | FFCP PHASE2:Hg19::chr4:184271970..184271992,-#_e4fffc4161fb3f5772bdfdf431f6ca74 | p@chr4:184271970..184271992, - |
| 3.99e-52 | FFCP PHASE1:Hg19::chr4:184271970..184271992,-#_e4fffc4161fb3f5772bdfdf431f6ca74 | p@chr4:184271970..184271992, - |
| 3.24e-51 | FFCP PHASE1:Hg19::chr15:33180622..33180633,-#_c59a0491db96a7f3141da41baa3cad86 | p13@FMN1 |
| 3.24e-51 | FFCP PHASE2:Hg19::chr15:33180622..33180633,-#_c59a0491db96a7f3141da41baa3cad86 | p13@FMN1 |
| 8.65e-49 | FFCP PHASE2:Hg19::chr13:24044200..24044211,+#_3c712760cb7750a775253bd2eee02e1b | p2@LINC00327 |
| 8.65e-49 | FFCP PHASE2:Hg19::chr1:198636401..198636419,-#_3c712760cb7750a775253bd2eee02e1b | p3@ENST00000413577 |
| 8.65e-49 | FFCP PHASE1:Hg19::chr1:198636401..198636419,-#_3c712760cb7750a775253bd2eee02e1b | p3@ENST00000413577 |
| 8.65e-49 | FFCP PHASE1:Hg19::chr13:24044200..24044211,+#_3c712760cb7750a775253bd2eee02e1b | p2@LINC00327 |
| 8.92e-46 | FFCP PHASE2:Hg19::chr1:197886646..197886657,+#_26b84ba41ec29e518b9ebf6de0897278 | p5@LHX9 |
| 8.92e-46 | FFCP PHASE1:Hg19::chr1:197886646..197886657,+#_26b84ba41ec29e518b9ebf6de0897278 | p5@LHX9 |
| 3.84e-42 | FFCP PHASE1:Hg19::chr22:48819856..48819861,+#_1deb66f37ebece96ecd7bd075785a10e | p@chr22:48819856..48819861, + |
| 3.84e-42 | FFCP PHASE2:Hg19::chr22:48819856..48819861,+#_1deb66f37ebece96ecd7bd075785a10e | p@chr22:48819856..48819861, + |
| 1.48e-40 | FFCP PHASE1:Hg19::chr1:55505693..55505698,+#_61d54d007e9179a6c85fdacd3ecdbe6f | p7@PCSK9 |
| 1.48e-40 | FFCP PHASE2:Hg19::chr1:55505693..55505698,+#_61d54d007e9179a6c85fdacd3ecdbe6f | p7@PCSK9 |
| 2.71e-40 | FFCP PHASE2:Hg19::chr2:100323985..100323997,-#_67cc6cebf24b5df239523ff828a7b341 | p@chr2:100323985..100323997, - |
| 2.71e-40 | FFCP PHASE1:Hg19::chr2:100323985..100323997,-#_67cc6cebf24b5df239523ff828a7b341 | p@chr2:100323985..100323997, - |
| 5.85e-40 | FFCP PHASE2:Hg19::chr15:39571769..39571781,-#_7f0941d2092056b7472822a648ce4476 | p@chr15:39571769..39571781, - |
| 5.85e-40 | FFCP PHASE1:Hg19::chr15:39571769..39571781,-#_7f0941d2092056b7472822a648ce4476 | p@chr15:39571769..39571781, - |
| 2.05e-39 | FFCP PHASE1:Hg19::chr15:33180498..33180522,-#_7feff5fc76178b1236b88277d5e1c57b | p4@FMN1 |
| 2.05e-39 | FFCP PHASE2:Hg19::chr15:33180498..33180522,-#_7feff5fc76178b1236b88277d5e1c57b | p4@FMN1 |
| 7.88e-38 | FFCP PHASE1:Hg19::chrX:3102846..3102872,+#_9ef23e1b1faf6473dc95af6bc4c77bc8 | p@chrX:3102846..3102872, + |
| 7.88e-38 | FFCP PHASE2:Hg19::chrX:3102846..3102872,+#_9ef23e1b1faf6473dc95af6bc4c77bc8 | p@chrX:3102846..3102872, + |
| 8.51e-37 | FFCP PHASE2:Hg19::chr1:198636258..198636278,-#_070ef078e373b69afb762968d02c45da | p1@ENST00000413577 |
| 8.51e-37 | FFCP PHASE1:Hg19::chr1:198636258..198636278,-#_070ef078e373b69afb762968d02c45da | p1@ENST00000413577 |
| 2.0e-36 | FFCP PHASE1:Hg19::chr2:100323966..100323983,-#_db81498d1132a72acabc25167d8847ff | p@chr2:100323966..100323983, - |
| 2.0e-36 | FFCP PHASE2:Hg19::chr2:100323966..100323983,-#_db81498d1132a72acabc25167d8847ff | p@chr2:100323966..100323983, - |
| 1.82e-34 | FFCP PHASE2:Hg19::chr1:197886421..197886432,+#_dfd7ecb1abaa5d169ef321b71cdcb2f5 | p2@LHX9 |
| 1.82e-34 | FFCP PHASE1:Hg19::chr1:197886421..197886432,+#_dfd7ecb1abaa5d169ef321b71cdcb2f5 | p2@LHX9 |
| 3.86e-33 | FFCP PHASE2:Hg19::chr1:197889151..197889159,+#_6afb523a50737be253dc808ff179e74a | p@chr1:197889151..197889159, + |
| 3.86e-33 | FFCP PHASE1:Hg19::chr1:197889151..197889159,+#_6afb523a50737be253dc808ff179e74a | p@chr1:197889151..197889159, + |
| 4.23e-33 | FFCP PHASE2:Hg19::chr5:167181769..167181798,+#_dfece9f67210dda07348ab311054e477 | p17@ODZ2 |
| 4.23e-33 | FFCP PHASE1:Hg19::chr5:167181769..167181798,+#_dfece9f67210dda07348ab311054e477 | p17@ODZ2 |
| 4.31e-33 | FFCP PHASE2:Hg19::chr1:197886772..197886790,+#_04a8e4272192112f4982c1a1711af9c9 | p4@LHX9 |
| 4.31e-33 | FFCP PHASE1:Hg19::chr1:197886772..197886790,+#_04a8e4272192112f4982c1a1711af9c9 | p4@LHX9 |
| 6.67e-33 | FFCP PHASE2:Hg19::chr1:197886617..197886628,+#_17028934e130f41e233006ca2aa5b6e3 | p8@LHX9 |
| 6.67e-33 | FFCP PHASE1:Hg19::chr1:197886617..197886628,+#_17028934e130f41e233006ca2aa5b6e3 | p8@LHX9 |
| 9.31e-33 | FFCP PHASE2:Hg19::chr14:32963433..32963487,+#_637af6e31824c0f213d70b9395eed692 | p4@AKAP6 |
| 9.31e-33 | FFCP PHASE1:Hg19::chr14:32963433..32963487,+#_637af6e31824c0f213d70b9395eed692 | p4@AKAP6 |
| 9.4e-33 | FFCP PHASE2:Hg19::chr8:23564380..23564391,+#_4ec354e6c40d737ff9d51ee976c5140c | p1@ENST00000523874 |
| 9.4e-33 | FFCP PHASE1:Hg19::chr8:23564380..23564391,+#_4ec354e6c40d737ff9d51ee976c5140c | p1@ENST00000523874 |
| 1.7e-32 | FFCP PHASE1:Hg19::chr20:52570906..52570909,-#_4f75130ecf87b57db7f528fdf531927e | p@chr20:52570906..52570909, - |
| 1.7e-32 | FFCP PHASE2:Hg19::chr20:52570906..52570909,-#_4f75130ecf87b57db7f528fdf531927e | p@chr20:52570906..52570909, - |
| 1.23e-30 | FFCP PHASE2:Hg19::chr1:197886665..197886732,+#_10f3ab3c377aee723fca2bcd21d370ac | p3@LHX9 |
| 1.23e-30 | FFCP PHASE1:Hg19::chr1:197886665..197886732,+#_10f3ab3c377aee723fca2bcd21d370ac | p3@LHX9 |
| 1.42e-30 | FFCP PHASE1:Hg19::chr15:33180558..33180570,-#_3e9ac3b81ba4d632a362e0ad145c1008 | p9@FMN1 |
| 1.42e-30 | FFCP PHASE2:Hg19::chr15:33180558..33180570,-#_3e9ac3b81ba4d632a362e0ad145c1008 | p9@FMN1 |
| 6.36e-30 | FFCP PHASE2:Hg19::chr2:239778648..239778664,+#_f4fb87600efd29cf0505d4db8ac5c1d4 | p@chr2:239778648..239778664, + |
| 6.36e-30 | FFCP PHASE1:Hg19::chr2:239778648..239778664,+#_f4fb87600efd29cf0505d4db8ac5c1d4 | p@chr2:239778648..239778664, + |
| 7.23e-30 | FFCP PHASE1:Hg19::chr15:39880996..39881011,+#_ff3044d7351c666bd583b0a11614daa2 | p41@THBS1 |
| 7.23e-30 | FFCP PHASE2:Hg19::chr15:39880996..39881011,+#_ff3044d7351c666bd583b0a11614daa2 | p41@THBS1 |
| 3.13e-29 | FFCP PHASE2:Hg19::chr2:158114405..158114413,+#_915f8031eec699c51206e055907fc1b1 | p11@GALNT5 |
| 3.13e-29 | FFCP PHASE1:Hg19::chr2:158114405..158114413,+#_915f8031eec699c51206e055907fc1b1 | p11@GALNT5 |
| 6.34e-29 | FFCP PHASE2:Hg19::chr12:114845970..114846000,+#_563d13cd377064ff4210cc0a5362e9e0 | p1@LOC255480 |
| 6.34e-29 | FFCP PHASE1:Hg19::chr12:114845970..114846000,+#_563d13cd377064ff4210cc0a5362e9e0 | p1@LOC255480 |
| 2.45e-28 | FFCP PHASE2:Hg19::chr6:113697548..113697566,-#_aac00fddd2e18e8ab719a57b17ac0b8b | p@chr6:113697548..113697566, - |
| 2.45e-28 | FFCP PHASE1:Hg19::chr6:113697548..113697566,-#_aac00fddd2e18e8ab719a57b17ac0b8b | p@chr6:113697548..113697566, - |
| 6.02e-28 | FFCP PHASE2:Hg19::chr15:39593792..39593816,-#_c4e7f63e7ed6fe922c0dc0e768779921 | p@chr15:39593792..39593816, - |
| 6.02e-28 | FFCP PHASE1:Hg19::chr15:39593792..39593816,-#_c4e7f63e7ed6fe922c0dc0e768779921 | p@chr15:39593792..39593816, - |
| 2.04e-27 | FFCP PHASE1:Hg19::chr12:10084960..10084974,-#_d3639b59905b5f001c6937dd7ef4b234 | p1@CLEC2A |
| 2.04e-27 | FFCP PHASE2:Hg19::chr12:10084960..10084974,-#_d3639b59905b5f001c6937dd7ef4b234 | p1@CLEC2A |
| 2.08e-27 | FFCP PHASE1:Hg19::chr7:131195751..131195762,+#_c0ff53c1a83717d617a152ee6eb300e8 | p@chr7:131195751..131195762, + |
| 2.08e-27 | FFCP PHASE2:Hg19::chr7:131195751..131195762,+#_c0ff53c1a83717d617a152ee6eb300e8 | p@chr7:131195751..131195762, + |
| 2.72e-27 | FFCP PHASE2:Hg19::chr10:129815627..129815630,+#_5024f33ba774499c99bf98bba30344f6 | p@chr10:129815627..129815630, + |
| 2.72e-27 | FFCP PHASE1:Hg19::chr10:129815627..129815630,+#_5024f33ba774499c99bf98bba30344f6 | p@chr10:129815627..129815630, + |
| 3.55e-27 | FFCP PHASE1:Hg19::chr12:91539677..91539688,-#_52d46b694a52f94f7cacb44f56990a55 | p@chr12:91539677..91539688, - |
| 3.55e-27 | FFCP PHASE2:Hg19::chr12:91539677..91539688,-#_52d46b694a52f94f7cacb44f56990a55 | p@chr12:91539677..91539688, - |
| 6.88e-27 | FFCP PHASE2:Hg19::chr8:23564065..23564087,-#_84628a1fac3593bea941a474ddcb2790 | p1@NKX2-6 |
| 6.88e-27 | FFCP PHASE1:Hg19::chr8:23564065..23564087,-#_84628a1fac3593bea941a474ddcb2790 | p1@NKX2-6 |
| 1.64e-26 | FFCP PHASE2:Hg19::chr9:125231389..125231402,+#_8346f2ce9e6fec670910364034a63cc7 | p2@OR1J2 |
| 1.64e-26 | FFCP PHASE1:Hg19::chr9:125231389..125231402,+#_8346f2ce9e6fec670910364034a63cc7 | p2@OR1J2 |
| 3.62e-26 | FFCP PHASE2:Hg19::chr9:110047130..110047161,+#_8dc175594867846e14fb49e82b1e9774 | p9@RAD23B |
| 3.62e-26 | FFCP PHASE1:Hg19::chr9:110047130..110047161,+#_8dc175594867846e14fb49e82b1e9774 | p9@RAD23B |
| 2.55e-25 | FFCP PHASE2:Hg19::chr2:238187300..238187323,-#_4a04416132100c8e43a4a1b0ea925240 | p@chr2:238187300..238187323, - |
| 2.55e-25 | FFCP PHASE1:Hg19::chr2:238187300..238187323,-#_4a04416132100c8e43a4a1b0ea925240 | p@chr2:238187300..238187323, - |
| 5.73e-25 | FFCP PHASE1:Hg19::chr19:43689230..43689259,+#_d9a567b7cb7f9721a1129cd06f7ac1be | p@chr19:43689230..43689259, + |
| 5.73e-25 | FFCP PHASE2:Hg19::chr19:43689230..43689259,+#_d9a567b7cb7f9721a1129cd06f7ac1be | p@chr19:43689230..43689259, + |
| 6.31e-25 | FFCP PHASE1:Hg19::chr7:45952643..45952654,-#_afebf7cfaa60520e105bcad51219a345 | p22@IGFBP3 |
| 6.31e-25 | FFCP PHASE2:Hg19::chr7:45952643..45952654,-#_afebf7cfaa60520e105bcad51219a345 | p22@IGFBP3 |
| 7.53e-25 | FFCP PHASE1:Hg19::chr5:167181899..167181909,+#_d7cae5c518332fc649d1abb6d4ddf8b7 | p14@ODZ2 |
| 7.53e-25 | FFCP PHASE2:Hg19::chr5:167181899..167181909,+#_d7cae5c518332fc649d1abb6d4ddf8b7 | p14@ODZ2 |
| 1.06e-24 | FFCP PHASE1:Hg19::chr6:75914944..75914952,-#_aef0b3226af386a13a826d7d5d53cebd | p@chr6:75914944..75914952, - |
| 1.06e-24 | FFCP PHASE2:Hg19::chr6:75914944..75914952,-#_aef0b3226af386a13a826d7d5d53cebd | p@chr6:75914944..75914952, - |
| 2.95e-24 | FFCP PHASE2:Hg19::chr5:167148342..167148357,+#_3ac5729b040bb63d3ce48af19baf55cf | p1@ENST00000517346 |
| 2.95e-24 | FFCP PHASE1:Hg19::chr5:167148342..167148357,+#_3ac5729b040bb63d3ce48af19baf55cf | p1@ENST00000517346 |
| 3.45e-24 | FFCP PHASE1:Hg19::chr6:75886595..75886610,-#_65978da26ca769330c5c0a37106eab31 | p@chr6:75886595..75886610, - |
| 3.45e-24 | FFCP PHASE2:Hg19::chr6:75886595..75886610,-#_65978da26ca769330c5c0a37106eab31 | p@chr6:75886595..75886610, - |
| 5.36e-24 | FFCP PHASE2:Hg19::chr3:58021410..58021424,+#_5f3f90d79ca7949541b3cf223e03fc85 | p@chr3:58021410..58021424, + |
| 5.36e-24 | FFCP PHASE1:Hg19::chr3:58021410..58021424,+#_5f3f90d79ca7949541b3cf223e03fc85 | p@chr3:58021410..58021424, + |
| 8.78e-24 | FFCP PHASE1:Hg19::chr12:88813132..88813143,-#_3ce9f7fdbb548e3e07ca9cbc1f021bc1 | p@chr12:88813132..88813143, - |
| 8.78e-24 | FFCP PHASE2:Hg19::chr12:88813132..88813143,-#_3ce9f7fdbb548e3e07ca9cbc1f021bc1 | p@chr12:88813132..88813143, - |
| 1.02e-23 | FFCP PHASE2:Hg19::chr1:197886561..197886569,+#_7665726dd186e5f5e9ab371d2f774292 | p10@LHX9 |
| 1.02e-23 | FFCP PHASE1:Hg19::chr1:197886561..197886569,+#_7665726dd186e5f5e9ab371d2f774292 | p10@LHX9 |
| 1.03e-23 | FFCP PHASE2:Hg19::chr7:84122019..84122030,-#_9c435f6ba3343b90c5fc2461f1dd441b | p18@SEMA3A |
| 1.03e-23 | FFCP PHASE1:Hg19::chr7:84122019..84122030,-#_9c435f6ba3343b90c5fc2461f1dd441b | p18@SEMA3A |
| 3.29e-23 | FFCP PHASE1:Hg19::chrX:119693827..119693835,-#_ce6d5b26abd704ec558abbb5fb15063e | p24@CUL4B |
| 3.29e-23 | FFCP PHASE2:Hg19::chrX:119693827..119693835,-#_ce6d5b26abd704ec558abbb5fb15063e | p24@CUL4B |
