DOID:0050615: Difference between revisions
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|located_in= | |located_in= | ||
|name=respiratory system cancer | |name=respiratory system cancer | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 16:47, 12 September 2014
| Name: | respiratory system cancer |
|---|---|
| Namespace: | FANTOM |
| Definition: | "An organ system cancer located_in the respiratory system that is characterized by uncontrolled cellular proliferation in the respiratory tract." [url:http://en.wikipedia.org/wiki/Respiratory_tract_neoplasm] |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:0050686(organ system cancer) |
|---|
Children
| is a: | DOID:0050619 (paranasal sinus cancer),DOID:1324 (lung cancer) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10414-106B9 (maxillary sinus tumor cell line:HSQ-89)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
- 10472-106I4
- 10486-107A9 (squamous cell lung carcinoma cell line:EBC-1)
- 10499-107C4 (lung adenocarcinoma cell line:A549)
- 10500-107C5
- 10501-107C6 (squamous cell lung carcinoma cell line:RERF-LC-AI)
... further results Mouse (Mus musculus)
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10414-106B9 (maxillary sinus tumor cell line:HSQ-89)
- 10457-106G7 (squamous cell lung carcinoma cell line:LC-1F)
- 10462-106H3
- 10468-106H9
- 10472-106I4
- 10486-107A9 (squamous cell lung carcinoma cell line:EBC-1)
- 10499-107C4 (lung adenocarcinoma cell line:A549)
- 10500-107C5
- 10501-107C6 (squamous cell lung carcinoma cell line:RERF-LC-AI)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:0050615 (respiratory system cancer), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.24e-40 | FFCP PHASE1:Hg19::chr6:73785930..73785949,-#_be15af24dd909034b65168b7baa310ea | p@chr6:73785930..73785949, - |
| 5.24e-40 | FFCP PHASE2:Hg19::chr6:73785930..73785949,-#_be15af24dd909034b65168b7baa310ea | p@chr6:73785930..73785949, - |
| 7.83e-38 | FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_b3bde08624220a79b525b7c4b8842f04 | p@chr6:73786593..73786601, + |
| 7.83e-38 | FFCP PHASE1:Hg19::chr11:69518332..69518343,-#_b3bde08624220a79b525b7c4b8842f04 | p@chr11:69518332..69518343, - |
| 7.83e-38 | FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_b3bde08624220a79b525b7c4b8842f04 | p@chr18:10085554..10085562, + |
| 7.83e-38 | FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_b3bde08624220a79b525b7c4b8842f04 | p@chr6:73786620..73786627, + |
| 7.83e-38 | FFCP PHASE2:Hg19::chr11:69518108..69518118,-#_b3bde08624220a79b525b7c4b8842f04 | p@chr11:69518108..69518118, - |
| 7.83e-38 | FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_b3bde08624220a79b525b7c4b8842f04 | p@chr6:73786593..73786601, + |
| 7.83e-38 | FFCP PHASE2:Hg19::chr11:69518332..69518343,-#_b3bde08624220a79b525b7c4b8842f04 | p@chr11:69518332..69518343, - |
| 7.83e-38 | FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_b3bde08624220a79b525b7c4b8842f04 | p@chr6:73786620..73786627, + |
| 7.83e-38 | FFCP PHASE1:Hg19::chr11:69518108..69518118,-#_b3bde08624220a79b525b7c4b8842f04 | p@chr11:69518108..69518118, - |
| 7.83e-38 | FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_b3bde08624220a79b525b7c4b8842f04 | p@chr18:10085554..10085562, + |
| 1.36e-28 | FFCP PHASE1:Hg19::chr2:135119522..135119533,+#_049d61f2023589cc98469eaedb1b8328 | p@chr2:135119522..135119533, + |
| 1.36e-28 | FFCP PHASE1:Hg19::chr3:95928689..95928701,-#_049d61f2023589cc98469eaedb1b8328 | p@chr3:95928689..95928701, - |
| 1.36e-28 | FFCP PHASE2:Hg19::chr12:79406792..79406813,+#_049d61f2023589cc98469eaedb1b8328 | p@chr12:79406792..79406813, + |
| 1.36e-28 | FFCP PHASE1:Hg19::chr2:135119540..135119551,+#_049d61f2023589cc98469eaedb1b8328 | p@chr2:135119540..135119551, + |
| 1.36e-28 | FFCP PHASE2:Hg19::chr2:135119522..135119533,+#_049d61f2023589cc98469eaedb1b8328 | p@chr2:135119522..135119533, + |
| 1.36e-28 | FFCP PHASE2:Hg19::chr3:95928689..95928701,-#_049d61f2023589cc98469eaedb1b8328 | p@chr3:95928689..95928701, - |
| 1.36e-28 | FFCP PHASE1:Hg19::chr12:79406792..79406813,+#_049d61f2023589cc98469eaedb1b8328 | p@chr12:79406792..79406813, + |
| 1.36e-28 | FFCP PHASE2:Hg19::chr2:135119540..135119551,+#_049d61f2023589cc98469eaedb1b8328 | p@chr2:135119540..135119551, + |
| 1.64e-28 | FFCP PHASE1:Hg19::chr2:233352573..233352580,-#_0dee07cc5e83b3603781de4f2fa4652a | p4@ECEL1 |
| 1.64e-28 | FFCP PHASE2:Hg19::chr2:233352573..233352580,-#_0dee07cc5e83b3603781de4f2fa4652a | p4@ECEL1 |
| 4.2e-28 | FFCP PHASE2:Hg19::chr8:63077406..63077421,-#_6daf5140ebc3753c6db36ef85bf8c45b | p@chr8:63077406..63077421, - |
| 4.2e-28 | FFCP PHASE1:Hg19::chr8:63077406..63077421,-#_6daf5140ebc3753c6db36ef85bf8c45b | p@chr8:63077406..63077421, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr16:50583018..50583026,+#_a60afee1b6eb75a72af1746219364d52 | p@chr16:50583018..50583026, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr17:79974321..79974331,+#_a60afee1b6eb75a72af1746219364d52 | p@chr17:79974321..79974331, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr7:31938679..31938703,-#_a60afee1b6eb75a72af1746219364d52 | p@chr7:31938679..31938703, - |
| 7.63e-26 | FFCP PHASE1:Hg19::chr12:55223769..55223774,+#_a60afee1b6eb75a72af1746219364d52 | p@chr12:55223769..55223774, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr3:95401960..95401971,-#_a60afee1b6eb75a72af1746219364d52 | p1@ENST00000494840, p1@uc003dro.1 |
| 7.63e-26 | FFCP PHASE2:Hg19::chr14:79331180..79331190,+#_a60afee1b6eb75a72af1746219364d52 | p@chr14:79331180..79331190, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr2:192917090..192917101,+#_a60afee1b6eb75a72af1746219364d52 | p@chr2:192917090..192917101, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr5:146890870..146890882,-#_a60afee1b6eb75a72af1746219364d52 | p@chr5:146890870..146890882, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr17:39093486..39093495,-#_a60afee1b6eb75a72af1746219364d52 | p8@KRT23 |
| 7.63e-26 | FFCP PHASE2:Hg19::chr12:28182901..28182931,+#_a60afee1b6eb75a72af1746219364d52 | p@chr12:28182901..28182931, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr11:69634178..69634189,-#_a60afee1b6eb75a72af1746219364d52 | p4@FGF3 |
| 7.63e-26 | FFCP PHASE2:Hg19::chr7:157944243..157944249,-#_a60afee1b6eb75a72af1746219364d52 | p@chr7:157944243..157944249, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr17:79974321..79974331,+#_a60afee1b6eb75a72af1746219364d52 | p@chr17:79974321..79974331, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr9:140350189..140350212,-#_a60afee1b6eb75a72af1746219364d52 | p30@NELF |
| 7.63e-26 | FFCP PHASE2:Hg19::chr6:998877..998891,-#_a60afee1b6eb75a72af1746219364d52 | p@chr6:998877..998891, - |
| 7.63e-26 | FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_a60afee1b6eb75a72af1746219364d52 | p@chr6:125378873..125378876, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr21:36599466..36599476,-#_a60afee1b6eb75a72af1746219364d52 | p@chr21:36599466..36599476, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr3:95928667..95928672,-#_a60afee1b6eb75a72af1746219364d52 | p@chr3:95928667..95928672, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr12:130617969..130617976,+#_a60afee1b6eb75a72af1746219364d52 | p@chr12:130617969..130617976, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr11:69634129..69634145,-#_a60afee1b6eb75a72af1746219364d52 | p3@FGF3 |
| 7.63e-26 | FFCP PHASE1:Hg19::chr2:97626600..97626606,-#_a60afee1b6eb75a72af1746219364d52 | p@chr2:97626600..97626606, - |
| 7.63e-26 | FFCP PHASE1:Hg19::chr5:146890655..146890661,-#_a60afee1b6eb75a72af1746219364d52 | p@chr5:146890655..146890661, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_a60afee1b6eb75a72af1746219364d52 | p@chr6:45405393..45405412, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr3:59032724..59032732,-#_a60afee1b6eb75a72af1746219364d52 | p@chr3:59032724..59032732, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr16:50583050..50583076,+#_a60afee1b6eb75a72af1746219364d52 | p@chr16:50583050..50583076, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_a60afee1b6eb75a72af1746219364d52 | p@chr6:45399245..45399258, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr1:167237970..167237996,+#_a60afee1b6eb75a72af1746219364d52 | p@chr1:167237970..167237996, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr5:146939429..146939436,+#_a60afee1b6eb75a72af1746219364d52 | p3@LOC153469 |
| 7.63e-26 | FFCP PHASE2:Hg19::chr12:79756373..79756391,-#_a60afee1b6eb75a72af1746219364d52 | p@chr12:79756373..79756391, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr14:79331221..79331232,+#_a60afee1b6eb75a72af1746219364d52 | p@chr14:79331221..79331232, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr2:192917107..192917114,+#_a60afee1b6eb75a72af1746219364d52 | p@chr2:192917107..192917114, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr14:79331180..79331190,+#_a60afee1b6eb75a72af1746219364d52 | p@chr14:79331180..79331190, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr3:86926149..86926150,+#_a60afee1b6eb75a72af1746219364d52 | p@chr3:86926149..86926150, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr4:4204390..4204427,-#_a60afee1b6eb75a72af1746219364d52 | p@chr4:4204390..4204427, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_a60afee1b6eb75a72af1746219364d52 | p@chr6:45399533..45399540, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chrX:151620193..151620201,-#_a60afee1b6eb75a72af1746219364d52 | p4@GABRA3 |
| 7.63e-26 | FFCP PHASE2:Hg19::chr11:69634335..69634346,-#_a60afee1b6eb75a72af1746219364d52 | p6@FGF3 |
| 7.63e-26 | FFCP PHASE2:Hg19::chr12:84178253..84178258,-#_a60afee1b6eb75a72af1746219364d52 | p@chr12:84178253..84178258, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr11:36489757..36489777,+#_a60afee1b6eb75a72af1746219364d52 | p@chr11:36489757..36489777, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr17:79973963..79973972,+#_a60afee1b6eb75a72af1746219364d52 | p@chr17:79973963..79973972, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr1:11000123..11000131,-#_a60afee1b6eb75a72af1746219364d52 | p@chr1:11000123..11000131, - |
| 7.63e-26 | FFCP PHASE1:Hg19::chr3:96150..96169,+#_a60afee1b6eb75a72af1746219364d52 | p@chr3:96150..96169, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr12:79406817..79406825,+#_a60afee1b6eb75a72af1746219364d52 | p@chr12:79406817..79406825, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr3:95928676..95928681,-#_a60afee1b6eb75a72af1746219364d52 | p@chr3:95928676..95928681, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr12:130618024..130618032,+#_a60afee1b6eb75a72af1746219364d52 | p@chr12:130618024..130618032, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr11:69634149..69634169,-#_a60afee1b6eb75a72af1746219364d52 | p2@FGF3 |
| 7.63e-26 | FFCP PHASE1:Hg19::chr5:146890667..146890672,-#_a60afee1b6eb75a72af1746219364d52 | p@chr5:146890667..146890672, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr5:146890606..146890628,-#_a60afee1b6eb75a72af1746219364d52 | p@chr5:146890606..146890628, - |
| 7.63e-26 | FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_a60afee1b6eb75a72af1746219364d52 | p@chr6:45399294..45399301, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr12:79406759..79406766,+#_a60afee1b6eb75a72af1746219364d52 | p@chr12:79406759..79406766, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr11:69655881..69655893,+#_a60afee1b6eb75a72af1746219364d52 | p@chr11:69655881..69655893, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr5:175298205..175298209,-#_a60afee1b6eb75a72af1746219364d52 | p@chr5:175298205..175298209, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_a60afee1b6eb75a72af1746219364d52 | p@chr6:45399263..45399274, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr15:46282024..46282028,+#_a60afee1b6eb75a72af1746219364d52 | p@chr15:46282024..46282028, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr16:50582928..50582933,+#_a60afee1b6eb75a72af1746219364d52 | p@chr16:50582928..50582933, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr11:69634097..69634102,-#_a60afee1b6eb75a72af1746219364d52 | p7@FGF3 |
| 7.63e-26 | FFCP PHASE2:Hg19::chr17:79973963..79973972,+#_a60afee1b6eb75a72af1746219364d52 | p@chr17:79973963..79973972, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr12:79756403..79756414,-#_a60afee1b6eb75a72af1746219364d52 | p@chr12:79756403..79756414, - |
| 7.63e-26 | FFCP PHASE1:Hg19::chr3:95928653..95928656,-#_a60afee1b6eb75a72af1746219364d52 | p@chr3:95928653..95928656, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr14:79331250..79331261,+#_a60afee1b6eb75a72af1746219364d52 | p@chr14:79331250..79331261, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr14:79331221..79331232,+#_a60afee1b6eb75a72af1746219364d52 | p@chr14:79331221..79331232, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr3:95401960..95401971,-#_a60afee1b6eb75a72af1746219364d52 | p1@ENST00000494840, p1@uc003dro.1 |
| 7.63e-26 | FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_a60afee1b6eb75a72af1746219364d52 | p@chr6:45405332..45405343, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr5:146890510..146890519,-#_a60afee1b6eb75a72af1746219364d52 | p@chr5:146890510..146890519, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr2:192917090..192917101,+#_a60afee1b6eb75a72af1746219364d52 | p@chr2:192917090..192917101, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr12:55223769..55223774,+#_a60afee1b6eb75a72af1746219364d52 | p@chr12:55223769..55223774, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr12:28182901..28182931,+#_a60afee1b6eb75a72af1746219364d52 | p@chr12:28182901..28182931, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr7:31938679..31938703,-#_a60afee1b6eb75a72af1746219364d52 | p@chr7:31938679..31938703, - |
| 7.63e-26 | FFCP PHASE1:Hg19::chr5:146890870..146890882,-#_a60afee1b6eb75a72af1746219364d52 | p@chr5:146890870..146890882, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr9:140350189..140350212,-#_a60afee1b6eb75a72af1746219364d52 | p30@NELF |
| 7.63e-26 | FFCP PHASE1:Hg19::chr11:36489757..36489777,+#_a60afee1b6eb75a72af1746219364d52 | p@chr11:36489757..36489777, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_a60afee1b6eb75a72af1746219364d52 | p@chr6:125378873..125378876, + |
| 7.63e-26 | FFCP PHASE1:Hg19::chr11:69634178..69634189,-#_a60afee1b6eb75a72af1746219364d52 | p4@FGF3 |
| 7.63e-26 | FFCP PHASE1:Hg19::chr12:130617969..130617976,+#_a60afee1b6eb75a72af1746219364d52 | p@chr12:130617969..130617976, + |
| 7.63e-26 | FFCP PHASE2:Hg19::chr2:97626600..97626606,-#_a60afee1b6eb75a72af1746219364d52 | p@chr2:97626600..97626606, - |
| 7.63e-26 | FFCP PHASE2:Hg19::chr5:146890655..146890661,-#_a60afee1b6eb75a72af1746219364d52 | p@chr5:146890655..146890661, - |
