FFCP PHASE1:Hg19::chr6:46293579..46293596,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=10231 | |EntrezGene=entrezgene:10231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=3041 | |HGNC=HGNC:3041 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q14206,Q86YJ0 | |UniProt=uniprot:Q14206,uniprot:Q86YJ0 | ||
|association_with_transcript=32bp_to_NM_005822_5end | |association_with_transcript=32bp_to_NM_005822_5end | ||
|cluster_id=chr6:46293579..46293596,- | |||
|coexpression_cluster_id=C4608 | |coexpression_cluster_id=C4608 | ||
|description=CAGE_peak_11_at_RCAN2_5end | |description=CAGE_peak_11_at_RCAN2_5end | ||
Revision as of 02:07, 31 July 2015
| Short description: | p11@RCAN2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_11_at_RCAN2_5end |
| Coexpression cluster: | C4608_myeloma_CD4_anaplastic_liposarcoma_pons_Fibroblast_adult |
| Association with transcript: | 32bp_to_NM_005822_5end |
| EntrezGene: | 10231 |
| HGNC: | 3041 |
| UniProt: | Q14206Q86YJ0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p11@RCAN2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ciliated cell | 2.36e-08 | 3 |
| ciliated epithelial cell | 2.36e-08 | 3 |
| multi-ciliated epithelial cell | 2.36e-08 | 3 |
| non-pigmented ciliary epithelial cell | 2.36e-08 | 3 |
| pigment cell (sensu Vertebrata) | 4.57e-07 | 1 |
| iris pigment epithelial cell | 4.57e-07 | 1 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| neural plate | 5.61e-16 | 82 |
| presumptive neural plate | 5.61e-16 | 82 |
| neurectoderm | 4.44e-15 | 86 |
| pre-chordal neural plate | 8.30e-15 | 61 |
| atypical epithelium | 3.14e-13 | 4 |
| regional part of nervous system | 9.19e-13 | 53 |
| regional part of brain | 9.19e-13 | 53 |
| pigment epithelium of eye | 1.63e-12 | 11 |
| neocortex | 3.44e-12 | 20 |
| neural tube | 5.70e-12 | 56 |
Showing 1 to 10 of 52 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow cancer | 1.46e-07 | 1 |
| myeloma | 1.46e-07 | 1 |
Showing 1 to 2 of 2 entries
