FFCP PHASE1:Hg19::chr12:25056160..25056161,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=586 | |EntrezGene=entrezgene:586 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=976 | |HGNC=HGNC:976 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=F5H5E4,B7Z2M5,P54687 | |UniProt=uniprot:F5H5E4,uniprot:B7Z2M5,uniprot:P54687 | ||
|association_with_transcript=-151bp_to_ENST00000539282,NM_001178093_5end | |association_with_transcript=-151bp_to_ENST00000539282,NM_001178093_5end | ||
|cluster_id=chr12:25056160..25056161,- | |||
|description=CAGE_peak_57_at_BCAT1_5end | |description=CAGE_peak_57_at_BCAT1_5end | ||
|id=chr12:25056160..25056161,- | |id=chr12:25056160..25056161,- | ||
Revision as of 07:43, 24 July 2015
| Short description: | p57@BCAT1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_57_at_BCAT1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -151bp_to_ENST00000539282, NM_001178093_5end |
| EntrezGene: | 586 |
| HGNC: | 976 |
| UniProt: | F5H5E4B7Z2M5P54687 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p57@BCAT1 |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| germ line cell | 3.65e-29 | 7 |
| germ cell | 3.65e-29 | 7 |
| adipocyte of omentum tissue | 1.12e-17 | 3 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| testis | 1.11e-25 | 8 |
| male reproductive organ | 5.14e-19 | 11 |
| body cavity | 1.44e-10 | 46 |
| gonad | 1.69e-10 | 21 |
| indifferent external genitalia | 1.69e-10 | 21 |
| indifferent gonad | 1.69e-10 | 21 |
| gonad primordium | 1.69e-10 | 21 |
| external genitalia | 4.53e-10 | 22 |
| male organism | 4.53e-10 | 22 |
| male reproductive system | 4.53e-10 | 22 |
Showing 1 to 10 of 17 entries
| Ontology term | p-value | n |
|---|---|---|
| germ cell and embryonal cancer | 4.53e-10 | 22 |
| germ cell cancer | 4.53e-10 | 22 |
Showing 1 to 2 of 2 entries
