FFCP PHASE1:Hg19::chr10:105314806..105314834,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=9148 | |EntrezGene=entrezgene:9148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7761 | |HGNC=HGNC:7761 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-154bp_to_ENST00000437579_5end | |association_with_transcript=-154bp_to_ENST00000437579_5end | ||
|cluster_id=chr10:105314806..105314834,+ | |||
|description=CAGE_peak_12_at_NEURL_5end | |description=CAGE_peak_12_at_NEURL_5end | ||
|id=chr10:105314806..105314834,+ | |id=chr10:105314806..105314834,+ |
Revision as of 10:00, 23 July 2015
Short description: | p12@NEURL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NEURL_5end |
Coexpression cluster: | NA |
Association with transcript: | -154bp_to_ENST00000437579_5end |
EntrezGene: | 9148 |
HGNC: | 7761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p12@NEURL |
---|
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.24e-23 | 9 |
CD14-positive, CD16-positive monocyte | 1.24e-23 | 9 |
classical monocyte | 9.62e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.62e-23 | 42 |
defensive cell | 2.71e-19 | 48 |
phagocyte | 2.71e-19 | 48 |
monopoietic cell | 1.75e-14 | 59 |
monocyte | 1.75e-14 | 59 |
monoblast | 1.75e-14 | 59 |
promonocyte | 1.75e-14 | 59 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 8.48e-53 | 32 |
telencephalon | 2.12e-49 | 34 |
brain grey matter | 3.17e-49 | 34 |
gray matter | 3.17e-49 | 34 |
regional part of telencephalon | 2.03e-48 | 32 |
regional part of nervous system | 3.36e-48 | 53 |
regional part of brain | 3.36e-48 | 53 |
regional part of forebrain | 4.58e-47 | 41 |
forebrain | 4.58e-47 | 41 |
anterior neural tube | 4.58e-47 | 41 |
Showing 1 to 10 of 77 entries