FFCP PHASE1:Mm9::chrX:91612486..91612504,+: Difference between revisions
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{{FFCP|EntrezGene=68316|HGNC=|MCL_coexpression_id=79|UniProt=Q9D186,Q9DCZ4|association_with_transcript=0bp_to_ENSMUST00000113896,ENSMUST00000113897,NM_001199337,NM_001199338,NM_001199339,uc009ttl.2,uc009ttm.2,uc012hme.1_5end|description=CAGE_peak_3_at_Apoo_5end|id=chrX:91612486..91612504,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!5.30e-08!18;UBERON:0000948!5.30e-08!18;UBERON:0005498!5.30e-08!18;UBERON:0004140!5.30e-08!18;UBERON:0009881!5.30e-08!18;UBERON:0004141!5.30e-08!18;UBERON:0003084!5.30e-08!18;UBERON:0007005!5.30e-08!18;UBERON:0004139!5.30e-08!18;UBERON:0004291!5.30e-08!18;UBERON:0003103!8.15e-07!43|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.79e-10,92;UBERON:0007100,4.59e-08,18;UBERON:0000948,4.59e-08,18;UBERON:0005498,4.59e-08,18;UBERON:0004140,4.59e-08,18;UBERON:0009881,4.59e-08,18;UBERON:0004141,4.59e-08,18;UBERON:0003084,4.59e-08,18;UBERON:0007005,4.59e-08,18;UBERON:0004139,4.59e-08,18;UBERON:0004291,4.59e-08,18;UBERON:0003103,5.03e-07,43|phase1_expression=4.48416771893423,4.18770489167233,2.72999543633722,5.44435580352294,4.00716583957078,2.18243053485457,2.10251376535973,0.903863264091034,1.40788722151667,0.70219357896598,1.36974374580404,1.19658238493005,1.19840510951844,1.39872643870396,0.333109761815663,0.404950534779652,0.699561878128147,0.946386496074713,0.822686601634433,0.42438965179803,3.14660173558958,1.09220046320974,0.783599367416806,2.71987118748791,1.60586496747019,4.59385571292016,3.87685796543167,3.66301095566011,5.13063232532209,2.77233142735924,1.33038306393183,1.27006134691926,0.61506478758457,0,2.59966457776147,2.99222361645286,2.24586291888606,0,0,0,0,0.683045484958446,0.971020706062307,2.01434908760924,1.31790010585369,1.28482726513177,0.782391344348039,2.39827672018491,1.75748946187577,2.3331587888914,0.139986421625363,0,0.503347818173209,0,0.336093799142464,0.514518872071894,1.43266719969378,1.54701627683233,2.02316460859598,1.5869729378161,0.633831403506179,1.0165335962074,0,0.899899717281399,0,0,1.19840044207362,1.15265491596466,1.24427534770173,1.21505344498522,0.420649922702764,3.99911378165325,3.75476519617743,1.34739879136449,1.53352753629178,0,5.50579404996943,3.95830748064082,5.83704826373725,2.2420668914133,2.37867873366265,3.12548022334056,4.18774498502071,4.50210088025344,3.81995619442025,2.65165726926301,3.55929201997757,4.47358669980721,0.530083353332288,0.453429360640713,1.44932244350839,6.0229671388697,1.3599426674155,3.2382191498269,3.89865850468601,8.06448396775204,8.56710962803686,0.681721290312231,1.29893002301434,0.70667914902068,3.66192891419369,1.28326477414318,0,0,1.5154372870785,1.26679932737549,2.52762222507392,4.90990682791958,1.55362730188303,3.56261133755579,0.346970653532272,1.21786191324856,2.7673859670727,1.95939432718409,2.4693628498498,4.39833069653864,1.23597483867187,23.5696951779456,1.76922110389975,3.23533699894818,4.19598885074748,3.87900202508178,5.59175283654366,4.9772735491963,4.39838084308256,5.10914110417183,0.239630249011841,0.599902730993408,0.635351135365324,4.49371918214468,4.57500602818627,2.01046963380583,5.21472960576829,4.60287823194595,5.40248915854856,6.00292673350703,0.101839363850316,2.73695335342205,2.27450482590307,6.94458124425364,1.95180664444056,3.67843367093557,2.34080768746954,2.10986744970001,1.90502197623718,2.562274405697,2.90475346135159,7.50239775143145,3.01795190105979,1.32374256117473,2.28736461413134,1.53437012699302,3.05851974148158,3.83077383174383,1.64625709126355,1.39323986772945,0.702213187313235,1.54408744268829,0.568326998791185,6.83515049367156,6.56672967947069,7.74266864282364,9.2330446878232,10.4285042826124,14.1925743856388,14.8821724640261,12.0723030629829,12.1435956061856,19.2535024398772,21.9984401865988,23.4288859587523,27.6317976233878,19.5399602609035,23.8887425393462,5.88811855979556,1.13195073617213,4.62586296177317,2.90895623329899,2.98603550749328,1.85789337488351,2.31961430379768,2.21851877085677,2.89091456998331,2.85338439168839,2.37264530772256,1.97638745668813,1.75934646160189,2.58643413653496,2.72949721966768,2.69645822596266,3.45820879799511,4.77939055810481,1.32767530667157,2.05647322697512,0,2.44381593414377,2.52138233317913,1.82353131714828,5.31186911843761,6.9376769550413,9.89091985400661,8.02081565491703,3.55743152504579,1.50160595144485,0.786235980452812,1.12431056192427,1.42002084971952,0.72353147925725,1.78238096246994,2.5892652370573,1.29708181420028,2.47105271869273,10.0637744569148,1.11642284300551,2.80833905803104,4.2938409251009,4.4849353380478,2.8946611281802,1.29327233116623,1.89491411770485,1.46668478797823,0.848725428875941,1.64283173801951,1.00503754465089,0.714130922658041,1.17080188714679,1.57635144106191,0.8858587585951,1.11618338060241,2.13022309130459,1.72684981865896,1.3018415272336,1.50791283939272,1.08781136763742,1.96705709207614,2.20749397043786,4.17431533968259,4.92289083687253,1.47541450839008,15.148255632262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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68316 | |||
|HGNC= | |||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9D186,uniprot:Q9DCZ4 | |||
|association_with_transcript=0bp_to_ENSMUST00000113896,ENSMUST00000113897,NM_001199337,NM_001199338,NM_001199339,uc009ttl.2,uc009ttm.2,uc012hme.1_5end | |||
|cluster_id=chrX:91612486..91612504,+ | |||
|description=CAGE_peak_3_at_Apoo_5end | |||
|id=chrX:91612486..91612504,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!5.30e-08!18;UBERON:0000948!5.30e-08!18;UBERON:0005498!5.30e-08!18;UBERON:0004140!5.30e-08!18;UBERON:0009881!5.30e-08!18;UBERON:0004141!5.30e-08!18;UBERON:0003084!5.30e-08!18;UBERON:0007005!5.30e-08!18;UBERON:0004139!5.30e-08!18;UBERON:0004291!5.30e-08!18;UBERON:0003103!8.15e-07!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.79e-10,92;UBERON:0007100,4.59e-08,18;UBERON:0000948,4.59e-08,18;UBERON:0005498,4.59e-08,18;UBERON:0004140,4.59e-08,18;UBERON:0009881,4.59e-08,18;UBERON:0004141,4.59e-08,18;UBERON:0003084,4.59e-08,18;UBERON:0007005,4.59e-08,18;UBERON:0004139,4.59e-08,18;UBERON:0004291,4.59e-08,18;UBERON:0003103,5.03e-07,43 | |||
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| |||
|short_description=p3@Apoo | |||
}} |
Revision as of 10:58, 6 August 2015
Short description: | p3@Apoo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Apoo_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 0bp_to_ENSMUST00000113896, ENSMUST00000113897, NM_001199337, NM_001199338, NM_001199339, uc009ttl.2, uc009ttm.2, uc012hme.1_5end |
EntrezGene: | 68316 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 3.79e-10 | 92 |
primary circulatory organ | 4.59e-08 | 18 |
heart | 4.59e-08 | 18 |
primitive heart tube | 4.59e-08 | 18 |
primary heart field | 4.59e-08 | 18 |
anterior lateral plate mesoderm | 4.59e-08 | 18 |
heart tube | 4.59e-08 | 18 |
heart primordium | 4.59e-08 | 18 |
cardiac mesoderm | 4.59e-08 | 18 |
cardiogenic plate | 4.59e-08 | 18 |
heart rudiment | 4.59e-08 | 18 |
compound organ | 5.03e-07 | 43 |