FFCP PHASE1:Mm9::chr9:73816708..73816806,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3723|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:73816708..73816806,-|id=chr9:73816708..73816806,-|ontology_enrichment_celltype=CL:0000540!6.23e-09!33;CL:0000047!6.23e-09!33;CL:0000031!6.23e-09!33;CL:0000404!6.23e-09!33;CL:0000393!1.26e-08!39;CL:0000211!1.26e-08!39|ontology_enrichment_celltype_v019_2=CL:0000540,2.70e-10,33;CL:0000047,2.70e-10,33;CL:0000031,2.70e-10,33;CL:0000404,2.70e-10,33;CL:0000393,8.62e-09,39;CL:0000211,8.62e-09,39;CL:0000117,1.94e-07,23;CL:0000337,1.94e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.23e-14!73;UBERON:0005743!1.23e-14!73;UBERON:0000073!2.62e-14!75;UBERON:0001016!2.62e-14!75;UBERON:0002346!4.09e-13!71;UBERON:0003075!4.09e-13!71;UBERON:0007284!4.09e-13!71;UBERON:0004121!5.01e-13!102;UBERON:0000924!5.01e-13!102;UBERON:0006601!5.01e-13!102;UBERON:0000033!6.03e-13!63;UBERON:0001049!1.86e-10!52;UBERON:0005068!1.86e-10!52;UBERON:0006241!1.86e-10!52;UBERON:0007135!1.86e-10!52;UBERON:0003056!3.04e-10!49;UBERON:0000955!9.20e-10!50;UBERON:0006238!9.20e-10!50;UBERON:0002616!2.38e-09!49;UBERON:0002020!8.35e-09!34|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.68e-17,64;UBERON:0003075,1.68e-17,64;UBERON:0007284,1.68e-17,64;UBERON:0001017,8.36e-17,73;UBERON:0004121,4.30e-16,95;UBERON:0000924,4.30e-16,95;UBERON:0006601,4.30e-16,95;UBERON:0010314,5.91e-16,92;UBERON:0001016,7.43e-16,75;UBERON:0010371,5.48e-14,73;UBERON:0000073,7.17e-13,54;UBERON:0001049,1.73e-11,52;UBERON:0005068,1.73e-11,52;UBERON:0006241,1.73e-11,52;UBERON:0007135,1.73e-11,52;UBERON:0002020,8.34e-11,34;UBERON:0003056,9.97e-11,49;UBERON:0000955,1.11e-08,47;UBERON:0006238,1.11e-08,47;UBERON:0002021,2.80e-08,10;UBERON:0000411,2.80e-08,10;UBERON:0001950,2.80e-08,10;UBERON:0002616,3.30e-08,46;UBERON:0003528,5.48e-08,29;UBERON:0002791,5.48e-08,29;UBERON:0001893,5.48e-08,29;UBERON:0003076,5.17e-07,12;UBERON:0003057,5.17e-07,12;UBERON:0002420,9.90e-07,8;UBERON:0007245,9.90e-07,8;UBERON:0010009,9.90e-07,8;UBERON:0010011,9.90e-07,8;UBERON:0000454,9.90e-07,8|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.811015449756117,0.550640256485045,0,0,0,0,0.139986421625363,0,0,0,0,0.514518872071894,0,2.57836046138721,2.22548106945558,2.11596391708813,4.43681982454325,1.0165335962074,0,0,0,0,0,0,0.103689612308478,0,0,1.99955689082663,5.52171352379034,0.367472397644862,0.479227355091182,0,25.3266526298594,30.9003358166154,38.4016333140609,3.16527090552465,2.47016637726506,4.68822033501084,16.1926139420801,14.6318278608237,23.5309301576288,12.374400589894,13.0981946335175,5.96478226640962,0.227178579999552,0.302286240427142,0,0,0,0.539703191637817,0,0,0.421333260395256,0.681721290312231,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.865964164044856,0.506719730950197,0,1.59857431606684,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0,0.470354828542819,0,0,0.144599356919912,0,0,0,0,0,93.104293449672,72.0496671438285,0.510914110417183,0,0,0,66.8066251745509,69.9975922312499,2.51308704225729,14.0797699355744,12.5300574091862,44.0510654466267,32.6104938766193,2.74966282395854,0.373220911830279,0.252722758433675,8.62811609134543,1.04096354370163,2.06911893990126,3.78130472591233,4.67184935290717,7.21186891004075,9.73664274164858,5.90320864726292,27.6812606690747,0,1.51284864134255,2.28736461413134,1.31517439456545,2.22437799380478,1.39300866608867,1.64625709126355,1.59227413454795,0,0,0,3.10688658803253,5.8631514995274,5.22179978236943,4.02466050494857,9.05115466038058,4.47374627373397,3.0229412817553,2.68273401399619,2.10177616260905,1.15191894939436,0,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,6.30869845692382,0.514523061896422,0,0,0.639864751605702,1.16118335930219,0.902072229254653,0.605050573870028,0.667134131534611,0.380451252225118,0,0.494096864172033,1.00534083520108,0.397912944082302,0.19496408711912,0,0,0,0.569003702859245,0.685491075658373,3.38123207019241,1.4255592949172,0.775809948670503,0.631222379012867,5.1853960441891,1.03327103585722,0.31399745568275,0.616985819609003,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.488894929326078,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,59.7248194754586,35.8667760972142,0,0,1.57754109708128,2.73307121007647,1.93881057959519,1.19484398976276,1.33679204449436,0.849229592366497,6.07216052512342,6.13737301613755,7.11518000303742,4.4984984299053,0.141940085208269,1.06839362200353,0.977321756121456,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0.540183282093931,0.129358683782755,0.428674070063185,0.886701168211368,0,0.822745103010605,0.304464949114599,0,0,0.22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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3723 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:73816708..73816806,- | |||
|description=CAGE_peak_at_chr9:73816708..73816806,- | |||
|id=chr9:73816708..73816806,- | |||
|ontology_enrichment_celltype=CL:0000540!6.23e-09!33;CL:0000047!6.23e-09!33;CL:0000031!6.23e-09!33;CL:0000404!6.23e-09!33;CL:0000393!1.26e-08!39;CL:0000211!1.26e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.70e-10,33;CL:0000047,2.70e-10,33;CL:0000031,2.70e-10,33;CL:0000404,2.70e-10,33;CL:0000393,8.62e-09,39;CL:0000211,8.62e-09,39;CL:0000117,1.94e-07,23;CL:0000337,1.94e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.23e-14!73;UBERON:0005743!1.23e-14!73;UBERON:0000073!2.62e-14!75;UBERON:0001016!2.62e-14!75;UBERON:0002346!4.09e-13!71;UBERON:0003075!4.09e-13!71;UBERON:0007284!4.09e-13!71;UBERON:0004121!5.01e-13!102;UBERON:0000924!5.01e-13!102;UBERON:0006601!5.01e-13!102;UBERON:0000033!6.03e-13!63;UBERON:0001049!1.86e-10!52;UBERON:0005068!1.86e-10!52;UBERON:0006241!1.86e-10!52;UBERON:0007135!1.86e-10!52;UBERON:0003056!3.04e-10!49;UBERON:0000955!9.20e-10!50;UBERON:0006238!9.20e-10!50;UBERON:0002616!2.38e-09!49;UBERON:0002020!8.35e-09!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.68e-17,64;UBERON:0003075,1.68e-17,64;UBERON:0007284,1.68e-17,64;UBERON:0001017,8.36e-17,73;UBERON:0004121,4.30e-16,95;UBERON:0000924,4.30e-16,95;UBERON:0006601,4.30e-16,95;UBERON:0010314,5.91e-16,92;UBERON:0001016,7.43e-16,75;UBERON:0010371,5.48e-14,73;UBERON:0000073,7.17e-13,54;UBERON:0001049,1.73e-11,52;UBERON:0005068,1.73e-11,52;UBERON:0006241,1.73e-11,52;UBERON:0007135,1.73e-11,52;UBERON:0002020,8.34e-11,34;UBERON:0003056,9.97e-11,49;UBERON:0000955,1.11e-08,47;UBERON:0006238,1.11e-08,47;UBERON:0002021,2.80e-08,10;UBERON:0000411,2.80e-08,10;UBERON:0001950,2.80e-08,10;UBERON:0002616,3.30e-08,46;UBERON:0003528,5.48e-08,29;UBERON:0002791,5.48e-08,29;UBERON:0001893,5.48e-08,29;UBERON:0003076,5.17e-07,12;UBERON:0003057,5.17e-07,12;UBERON:0002420,9.90e-07,8;UBERON:0007245,9.90e-07,8;UBERON:0010009,9.90e-07,8;UBERON:0010011,9.90e-07,8;UBERON:0000454,9.90e-07,8 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.97354979238772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25896817975577,0.811015449756117,0.550640256485045,0,0,0,0,0.139986421625363,0,0,0,0,0.514518872071894,0,2.57836046138721,2.22548106945558,2.11596391708813,4.43681982454325,1.0165335962074,0,0,0,0,0,0,0.103689612308478,0,0,1.99955689082663,5.52171352379034,0.367472397644862,0.479227355091182,0,25.3266526298594,30.9003358166154,38.4016333140609,3.16527090552465,2.47016637726506,4.68822033501084,16.1926139420801,14.6318278608237,23.5309301576288,12.374400589894,13.0981946335175,5.96478226640962,0.227178579999552,0.302286240427142,0,0,0,0.539703191637817,0,0,0.421333260395256,0.681721290312231,0.259786004602869,0.70667914902068,0.14084341977668,0,0,0,0.865964164044856,0.506719730950197,0,1.59857431606684,0,0,0.520455980298408,0.608930956624282,0.230615497256059,0,0.470354828542819,0,0,0.144599356919912,0,0,0,0,0,93.104293449672,72.0496671438285,0.510914110417183,0,0,0,66.8066251745509,69.9975922312499,2.51308704225729,14.0797699355744,12.5300574091862,44.0510654466267,32.6104938766193,2.74966282395854,0.373220911830279,0.252722758433675,8.62811609134543,1.04096354370163,2.06911893990126,3.78130472591233,4.67184935290717,7.21186891004075,9.73664274164858,5.90320864726292,27.6812606690747,0,1.51284864134255,2.28736461413134,1.31517439456545,2.22437799380478,1.39300866608867,1.64625709126355,1.59227413454795,0,0,0,3.10688658803253,5.8631514995274,5.22179978236943,4.02466050494857,9.05115466038058,4.47374627373397,3.0229412817553,2.68273401399619,2.10177616260905,1.15191894939436,0,0.324275238183423,0.438599962275997,0.219550115291051,0.134206418760372,6.30869845692382,0.514523061896422,0,0,0.639864751605702,1.16118335930219,0.902072229254653,0.605050573870028,0.667134131534611,0.380451252225118,0,0.494096864172033,1.00534083520108,0.397912944082302,0.19496408711912,0,0,0,0.569003702859245,0.685491075658373,3.38123207019241,1.4255592949172,0.775809948670503,0.631222379012867,5.1853960441891,1.03327103585722,0.31399745568275,0.616985819609003,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0,0.947457058852424,0.488894929326078,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0,0,0,59.7248194754586,35.8667760972142,0,0,1.57754109708128,2.73307121007647,1.93881057959519,1.19484398976276,1.33679204449436,0.849229592366497,6.07216052512342,6.13737301613755,7.11518000303742,4.4984984299053,0.141940085208269,1.06839362200353,0.977321756121456,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.614870295887855,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0.540183282093931,0.129358683782755,0.428674070063185,0.886701168211368,0,0.822745103010605,0.304464949114599,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0.358117032009409,0.164140899745061,0,47.4688773146905,0,0.412773735926445,0.555583582109135,0,0.136694227721025,0,0,0,0,0,1.26534397432454,3.45643094115643,1.72808545314882,3.13632444021703,3.71216358368502,1.34864346384821,1.90102948168273,0,0.129614973291793,0,0,0.897099276263873,0.330916980914195,1.36115831840833,1.29159823477731,1.68956125490778,1.99507305697782,0.911430693907651,0.419437377702843,0,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0.453460767230423,0,0,0,1.73870634628971,0,0.183151624267265,0,0,8.471277639256,16.5717085142584,8.02053718815155,6.18671456437275,7.53590771747707,6.0431511791176,6.75022500231806,5.40385443869065,4.53142408984205,3.62432218226274,0.31136204275253,2.79317411380722,2.21953687480374,0.972426868273176,1.25767897576789,1.65459157605013,1.77797382241292,4.12070114477788,1.28367683836726,2.02157769411038,2.02783439912192,1.32038438970253,1.591905626988,1.60062881012173,1.95280594449085,0.952587382566147,2.54945517078682,2.31491064556446,2.47251540481984,2.64958056241915,1.71434626192708,2.30718548007139,1.66905332963125,2.18019624948493,2.4468438907986,1.60767754994185,1.28049581010941,2.10455769150274,1.22223702461276,0.561142271657738,1.66089025373844,1.28055827088233,0.818462086339379,1.85924209423159,1.15743966588685,2.74791635731741,2.33931608445408,1.93383948643468,0.382576664137687,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr9:73816708..73816806,- | |||
}} |
Latest revision as of 15:09, 5 August 2015
Short description: | p@chr9:73816708..73816806, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:73816708..73816806, - |
Coexpression cluster: | MCL_coexpression_mm9:3723 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.70e-10 | 33 |
neuronal stem cell | 2.70e-10 | 33 |
neuroblast | 2.70e-10 | 33 |
electrically signaling cell | 2.70e-10 | 33 |
electrically responsive cell | 8.62e-09 | 39 |
electrically active cell | 8.62e-09 | 39 |
CNS neuron (sensu Vertebrata) | 1.94e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.94e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.68e-17 | 64 |
neural plate | 1.68e-17 | 64 |
presumptive neural plate | 1.68e-17 | 64 |
central nervous system | 8.36e-17 | 73 |
ectoderm-derived structure | 4.30e-16 | 95 |
ectoderm | 4.30e-16 | 95 |
presumptive ectoderm | 4.30e-16 | 95 |
structure with developmental contribution from neural crest | 5.91e-16 | 92 |
nervous system | 7.43e-16 | 75 |
ecto-epithelium | 5.48e-14 | 73 |
regional part of nervous system | 7.17e-13 | 54 |
neural tube | 1.73e-11 | 52 |
neural rod | 1.73e-11 | 52 |
future spinal cord | 1.73e-11 | 52 |
neural keel | 1.73e-11 | 52 |
gray matter | 8.34e-11 | 34 |
pre-chordal neural plate | 9.97e-11 | 49 |
brain | 1.11e-08 | 47 |
future brain | 1.11e-08 | 47 |
occipital lobe | 2.80e-08 | 10 |
visual cortex | 2.80e-08 | 10 |
neocortex | 2.80e-08 | 10 |
regional part of brain | 3.30e-08 | 46 |
brain grey matter | 5.48e-08 | 29 |
regional part of telencephalon | 5.48e-08 | 29 |
telencephalon | 5.48e-08 | 29 |
posterior neural tube | 5.17e-07 | 12 |
chordal neural plate | 5.17e-07 | 12 |
basal ganglion | 9.90e-07 | 8 |
nuclear complex of neuraxis | 9.90e-07 | 8 |
aggregate regional part of brain | 9.90e-07 | 8 |
collection of basal ganglia | 9.90e-07 | 8 |
cerebral subcortex | 9.90e-07 | 8 |