FFCP PHASE1:Mm9::chr9:43880279..43880294,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=558|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:43880279..43880294,+|id=chr9:43880279..43880294,+|ontology_enrichment_celltype=CL:0000221!3.78e-20!44;CL:0000133!3.78e-20!44;CL:0002319!1.18e-19!43;CL:0000055!4.41e-17!50;CL:0000540!6.21e-14!33;CL:0000047!6.21e-14!33;CL:0000031!6.21e-14!33;CL:0000404!6.21e-14!33;CL:0000393!2.34e-12!39;CL:0000211!2.34e-12!39;CL:0002321!7.74e-09!70;CL:0000220!7.74e-09!70;CL:0000117!3.18e-08!23;CL:0000337!3.18e-08!23;CL:0000107!5.11e-07!9;CL:0000333!9.15e-07!10;CL:0000095!9.15e-07!10;CL:0000243!9.15e-07!10;CL:0000123!9.15e-07!10;CL:0000125!9.15e-07!10;CL:0000030!9.15e-07!10;CL:0000339!9.15e-07!10|ontology_enrichment_celltype_v019_2=CL:0000221,1.32e-26,44;CL:0000133,1.32e-26,44;CL:0002319,7.97e-26,43;CL:0000540,1.82e-16,33;CL:0000047,1.82e-16,33;CL:0000031,1.82e-16,33;CL:0000404,1.82e-16,33;CL:0000393,1.11e-12,39;CL:0000211,1.11e-12,39;CL:0002321,2.32e-12,70;CL:0000333,1.17e-10,10;CL:0000095,1.17e-10,10;CL:0000243,1.17e-10,10;CL:0000123,1.17e-10,10;CL:0000125,1.17e-10,10;CL:0000030,1.17e-10,10;CL:0000339,1.17e-10,10;CL:0000107,1.80e-10,9;CL:0002453,1.21e-08,8;CL:0000117,4.83e-08,23;CL:0000337,4.83e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!6.94e-35!75;UBERON:0001016!6.94e-35!75;UBERON:0004121!6.61e-34!102;UBERON:0000924!6.61e-34!102;UBERON:0006601!6.61e-34!102;UBERON:0001017!2.51e-33!73;UBERON:0005743!2.51e-33!73;UBERON:0000033!1.42e-23!63;UBERON:0002346!2.24e-23!71;UBERON:0003075!2.24e-23!71;UBERON:0007284!2.24e-23!71;UBERON:0001049!2.67e-20!52;UBERON:0005068!2.67e-20!52;UBERON:0006241!2.67e-20!52;UBERON:0007135!2.67e-20!52;UBERON:0000955!1.15e-19!50;UBERON:0006238!1.15e-19!50;UBERON:0002616!4.18e-19!49;UBERON:0003056!2.50e-18!49;UBERON:0003080!7.15e-15!40;UBERON:0002780!3.49e-14!39;UBERON:0001890!3.49e-14!39;UBERON:0006240!3.49e-14!39;UBERON:0002020!4.57e-13!34;UBERON:0007811!3.65e-11!86;UBERON:0002791!8.55e-11!29;UBERON:0003528!8.55e-11!29;UBERON:0001893!8.55e-11!29;UBERON:0004111!1.31e-09!122;UBERON:0000153!1.75e-09!94;UBERON:0000025!3.20e-09!114;UBERON:0000010!2.90e-08!11;UBERON:0000956!2.94e-07!21;UBERON:0001869!2.94e-07!21;UBERON:0000203!2.94e-07!21;UBERON:0002619!3.68e-07!17;UBERON:0002410!5.11e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.11e-43,75;UBERON:0004121,1.79e-42,95;UBERON:0000924,1.79e-42,95;UBERON:0006601,1.79e-42,95;UBERON:0001017,9.21e-41,73;UBERON:0002346,1.89e-28,64;UBERON:0003075,1.89e-28,64;UBERON:0007284,1.89e-28,64;UBERON:0010371,1.83e-25,73;UBERON:0000073,8.36e-23,54;UBERON:0001049,6.70e-21,52;UBERON:0005068,6.70e-21,52;UBERON:0006241,6.70e-21,52;UBERON:0007135,6.70e-21,52;UBERON:0000955,3.94e-17,47;UBERON:0006238,3.94e-17,47;UBERON:0010314,4.76e-17,92;UBERON:0003056,5.44e-17,49;UBERON:0002616,2.34e-16,46;UBERON:0002020,3.08e-14,34;UBERON:0003080,1.10e-12,40;UBERON:0000010,1.70e-12,11;UBERON:0002780,8.78e-12,39;UBERON:0001890,8.78e-12,39;UBERON:0006240,8.78e-12,39;UBERON:0011216,1.28e-11,194;UBERON:0003528,7.38e-11,29;UBERON:0002791,7.38e-11,29;UBERON:0001893,7.38e-11,29;UBERON:0002410,1.80e-10,9;UBERON:0003076,1.12e-09,12;UBERON:0003057,1.12e-09,12;UBERON:0000025,2.43e-09,114;UBERON:0004111,5.05e-09,122;UBERON:0002420,3.62e-07,8;UBERON:0007245,3.62e-07,8;UBERON:0010009,3.62e-07,8;UBERON:0010011,3.62e-07,8;UBERON:0000454,3.62e-07,8;UBERON:0000119,8.44e-07,176;UBERON:0002619,9.04e-07,17|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.367093504323363,0,13.5175596955877,12.3024262331304,14.9711022287198,6.85933465964276,14.3752564364972,0,0,0,0,0.286533439938757,0,1.61853168687678,0,3.1691570175309,1.0165335962074,0,0,0.988866362566974,0,11.9840044207362,34.9638657842615,0.103689612308478,0.675029691658453,0.210324961351382,3.99911378165325,1.76694832761291,0.979926393719632,0.766763768145891,0.919218786610021,5.50579404996943,5.10749352340751,4.91540906419979,1.97829431595291,1.73826522844578,1.04182674111352,2.51264699101243,6.19038871034848,4.27835093775068,2.06240009831567,2.98980529678116,2.05039390407831,4.92220256665696,5.44115232768856,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,2.39433813620357,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0,0,0,0.461230994512117,0.150722640552623,0.352766121407114,0.376999773989026,0,0.289198713839823,0,0.161766849947409,0,0,0,2.92780797011547,4.81727425670947,0.255457055208591,0,0,0,6.89036941262184,6.40500843946077,1.13088916901578,2.08589184230732,3.3243009452943,8.10373373782284,4.54275536589721,0,0.497627882440372,0,0.420883711772948,2.08192708740326,1.83921683546778,1.44049703844279,1.35634336052144,3.26575195926374,2.43416068541215,1.40552586839593,1.81092359517311,0.215567992932842,0,0.351902248327898,0,0,0,0.411564272815887,0,0,0,0.284163499395593,0.207125772535502,0,0,0,0,0.154267112887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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=558 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr9:43880279..43880294,+ | |||
|description=CAGE_peak_at_chr9:43880279..43880294,+ | |||
|id=chr9:43880279..43880294,+ | |||
|ontology_enrichment_celltype=CL:0000221!3.78e-20!44;CL:0000133!3.78e-20!44;CL:0002319!1.18e-19!43;CL:0000055!4.41e-17!50;CL:0000540!6.21e-14!33;CL:0000047!6.21e-14!33;CL:0000031!6.21e-14!33;CL:0000404!6.21e-14!33;CL:0000393!2.34e-12!39;CL:0000211!2.34e-12!39;CL:0002321!7.74e-09!70;CL:0000220!7.74e-09!70;CL:0000117!3.18e-08!23;CL:0000337!3.18e-08!23;CL:0000107!5.11e-07!9;CL:0000333!9.15e-07!10;CL:0000095!9.15e-07!10;CL:0000243!9.15e-07!10;CL:0000123!9.15e-07!10;CL:0000125!9.15e-07!10;CL:0000030!9.15e-07!10;CL:0000339!9.15e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.32e-26,44;CL:0000133,1.32e-26,44;CL:0002319,7.97e-26,43;CL:0000540,1.82e-16,33;CL:0000047,1.82e-16,33;CL:0000031,1.82e-16,33;CL:0000404,1.82e-16,33;CL:0000393,1.11e-12,39;CL:0000211,1.11e-12,39;CL:0002321,2.32e-12,70;CL:0000333,1.17e-10,10;CL:0000095,1.17e-10,10;CL:0000243,1.17e-10,10;CL:0000123,1.17e-10,10;CL:0000125,1.17e-10,10;CL:0000030,1.17e-10,10;CL:0000339,1.17e-10,10;CL:0000107,1.80e-10,9;CL:0002453,1.21e-08,8;CL:0000117,4.83e-08,23;CL:0000337,4.83e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.94e-35!75;UBERON:0001016!6.94e-35!75;UBERON:0004121!6.61e-34!102;UBERON:0000924!6.61e-34!102;UBERON:0006601!6.61e-34!102;UBERON:0001017!2.51e-33!73;UBERON:0005743!2.51e-33!73;UBERON:0000033!1.42e-23!63;UBERON:0002346!2.24e-23!71;UBERON:0003075!2.24e-23!71;UBERON:0007284!2.24e-23!71;UBERON:0001049!2.67e-20!52;UBERON:0005068!2.67e-20!52;UBERON:0006241!2.67e-20!52;UBERON:0007135!2.67e-20!52;UBERON:0000955!1.15e-19!50;UBERON:0006238!1.15e-19!50;UBERON:0002616!4.18e-19!49;UBERON:0003056!2.50e-18!49;UBERON:0003080!7.15e-15!40;UBERON:0002780!3.49e-14!39;UBERON:0001890!3.49e-14!39;UBERON:0006240!3.49e-14!39;UBERON:0002020!4.57e-13!34;UBERON:0007811!3.65e-11!86;UBERON:0002791!8.55e-11!29;UBERON:0003528!8.55e-11!29;UBERON:0001893!8.55e-11!29;UBERON:0004111!1.31e-09!122;UBERON:0000153!1.75e-09!94;UBERON:0000025!3.20e-09!114;UBERON:0000010!2.90e-08!11;UBERON:0000956!2.94e-07!21;UBERON:0001869!2.94e-07!21;UBERON:0000203!2.94e-07!21;UBERON:0002619!3.68e-07!17;UBERON:0002410!5.11e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.11e-43,75;UBERON:0004121,1.79e-42,95;UBERON:0000924,1.79e-42,95;UBERON:0006601,1.79e-42,95;UBERON:0001017,9.21e-41,73;UBERON:0002346,1.89e-28,64;UBERON:0003075,1.89e-28,64;UBERON:0007284,1.89e-28,64;UBERON:0010371,1.83e-25,73;UBERON:0000073,8.36e-23,54;UBERON:0001049,6.70e-21,52;UBERON:0005068,6.70e-21,52;UBERON:0006241,6.70e-21,52;UBERON:0007135,6.70e-21,52;UBERON:0000955,3.94e-17,47;UBERON:0006238,3.94e-17,47;UBERON:0010314,4.76e-17,92;UBERON:0003056,5.44e-17,49;UBERON:0002616,2.34e-16,46;UBERON:0002020,3.08e-14,34;UBERON:0003080,1.10e-12,40;UBERON:0000010,1.70e-12,11;UBERON:0002780,8.78e-12,39;UBERON:0001890,8.78e-12,39;UBERON:0006240,8.78e-12,39;UBERON:0011216,1.28e-11,194;UBERON:0003528,7.38e-11,29;UBERON:0002791,7.38e-11,29;UBERON:0001893,7.38e-11,29;UBERON:0002410,1.80e-10,9;UBERON:0003076,1.12e-09,12;UBERON:0003057,1.12e-09,12;UBERON:0000025,2.43e-09,114;UBERON:0004111,5.05e-09,122;UBERON:0002420,3.62e-07,8;UBERON:0007245,3.62e-07,8;UBERON:0010009,3.62e-07,8;UBERON:0010011,3.62e-07,8;UBERON:0000454,3.62e-07,8;UBERON:0000119,8.44e-07,176;UBERON:0002619,9.04e-07,17 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.405507724878058,0.367093504323363,0,13.5175596955877,12.3024262331304,14.9711022287198,6.85933465964276,14.3752564364972,0,0,0,0,0.286533439938757,0,1.61853168687678,0,3.1691570175309,1.0165335962074,0,0,0.988866362566974,0,11.9840044207362,34.9638657842615,0.103689612308478,0.675029691658453,0.210324961351382,3.99911378165325,1.76694832761291,0.979926393719632,0.766763768145891,0.919218786610021,5.50579404996943,5.10749352340751,4.91540906419979,1.97829431595291,1.73826522844578,1.04182674111352,2.51264699101243,6.19038871034848,4.27835093775068,2.06240009831567,2.98980529678116,2.05039390407831,4.92220256665696,5.44115232768856,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0,0,2.39433813620357,0,0,0,0.216491041011214,0,0.505524445014783,0.22836775943812,0,0,0,0,0.461230994512117,0.150722640552623,0.352766121407114,0.376999773989026,0,0.289198713839823,0,0.161766849947409,0,0,0,2.92780797011547,4.81727425670947,0.255457055208591,0,0,0,6.89036941262184,6.40500843946077,1.13088916901578,2.08589184230732,3.3243009452943,8.10373373782284,4.54275536589721,0,0.497627882440372,0,0.420883711772948,2.08192708740326,1.83921683546778,1.44049703844279,1.35634336052144,3.26575195926374,2.43416068541215,1.40552586839593,1.81092359517311,0.215567992932842,0,0.351902248327898,0,0,0,0.411564272815887,0,0,0,0.284163499395593,0.207125772535502,0,0,0,0,0.154267112887378,0,0.536546802799238,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0.219550115291051,0.671032093801859,5.25724871410318,2.77842453424068,0,0.264450566663544,0.213288250535234,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0,0.193952487167626,0,0.126473074248515,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.05290631816363,0,0,0.339490171550376,1.17345124144251,1.84256883185997,2.61848004974615,2.92700471786698,2.20689201748667,1.7717175171902,0.637819074629948,2.62181303545181,0.863424909329478,2.60368305446721,0,0,0,0.827810238914197,6.74312477948726,3.16471553798949,0,0,6.31016438832513,3.51394869866975,2.36965737506079,4.77937595905104,6.46116154838943,5.09537755419898,7.2865926301481,7.3063964477828,5.13874111330481,3.21321316421807,4.68402281187286,0,0,9.73323725537959,1.32745138339963,0,0,0.377210159511796,0.295301892880773,0,0,0,0,0,0,0,0.680879211507576,0.900305470156551,1.94038025674132,0.857348140126369,0.709360934569094,0.356737635204141,1.48094118541909,4.56697423671899,0.469343416127421,0,0,0.32977250588296,0.161464426695906,0.120625849856312,0,0.164140899745061,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0,0,0.19318959403219,1.50145980360946,0.36630324853453,0.214368379079066,0.501572104035363,1.12950368523413,3.22227665555024,1.71868654031819,1.3748254587495,0,3.7769694869485,1.35004500046361,0.900642406448441,4.07828168085784,3.62432218226274,0.726511433089237,0.798049746802062,0.341467211508268,0.243106717068294,0.838452650511929,0.367687016900028,0.666740183404846,0.412070114477788,0.962757628775446,0.758091635291392,0.50695859978048,0.565879024158229,0.561849044819294,0.448176066834085,0.746661096422973,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,1.03039244094078,0.342869252385415,0.532427418478012,0.238436189947321,0.145346416632329,0.752875043322645,0.761531471025089,0.365855945745545,0.263069711437843,0.271608227691724,1.12228454331548,0.593175090620871,0.197008964751127,0,0.464810523557898,0.771626443924566,1.49886346762768,0.701794825336225,0,0.382576664137687,0.220591419119515,0 | |||
|short_description=p@chr9:43880279..43880294,+ | |||
}} |
Latest revision as of 03:35, 5 August 2015
Short description: | p@chr9:43880279..43880294, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:43880279..43880294, + |
Coexpression cluster: | MCL_coexpression_mm9:558 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.32e-26 | 44 |
neurectodermal cell | 1.32e-26 | 44 |
neural cell | 7.97e-26 | 43 |
neuron | 1.82e-16 | 33 |
neuronal stem cell | 1.82e-16 | 33 |
neuroblast | 1.82e-16 | 33 |
electrically signaling cell | 1.82e-16 | 33 |
electrically responsive cell | 1.11e-12 | 39 |
electrically active cell | 1.11e-12 | 39 |
embryonic cell | 2.32e-12 | 70 |
migratory neural crest cell | 1.17e-10 | 10 |
neuron associated cell | 1.17e-10 | 10 |
glial cell (sensu Vertebrata) | 1.17e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 1.17e-10 | 10 |
glial cell | 1.17e-10 | 10 |
glioblast | 1.17e-10 | 10 |
glioblast (sensu Vertebrata) | 1.17e-10 | 10 |
autonomic neuron | 1.80e-10 | 9 |
oligodendrocyte precursor cell | 1.21e-08 | 8 |
CNS neuron (sensu Vertebrata) | 4.83e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.83e-08 | 23 |