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FFCP PHASE1:Mm9::chr8:88364633..88364679,-: Difference between revisions

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{{FFCP|EntrezGene=71927|HGNC=|MCL_coexpression_id=1|UniProt=Q99KW9|association_with_transcript=168bp_to_ENSMUST00000034140,NM_028007,uc009mqf.2_5end|description=CAGE_peak_2_at_Itfg1_5end|id=chr8:88364633..88364679,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!2.09e-12!63;UBERON:0002346!1.43e-11!71;UBERON:0003075!1.43e-11!71;UBERON:0007284!1.43e-11!71;UBERON:0004111!8.05e-11!122;UBERON:0007023!2.03e-10!51;UBERON:0001049!3.06e-10!52;UBERON:0005068!3.06e-10!52;UBERON:0006241!3.06e-10!52;UBERON:0007135!3.06e-10!52;UBERON:0000955!7.30e-10!50;UBERON:0006238!7.30e-10!50;UBERON:0004121!1.36e-09!102;UBERON:0000924!1.36e-09!102;UBERON:0006601!1.36e-09!102;UBERON:0002616!2.09e-09!49;UBERON:0001017!2.59e-09!73;UBERON:0005743!2.59e-09!73;UBERON:0003056!7.18e-09!49;UBERON:0000025!1.02e-08!114;UBERON:0000073!1.07e-08!75;UBERON:0001016!1.07e-08!75;UBERON:0002021!8.35e-08!10;UBERON:0000411!8.35e-08!10;UBERON:0001950!8.35e-08!10;UBERON:0003080!3.18e-07!40;UBERON:0002020!6.64e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.03e-14,92;UBERON:0002346,1.49e-12,64;UBERON:0003075,1.49e-12,64;UBERON:0007284,1.49e-12,64;UBERON:0010371,1.60e-11,73;UBERON:0000073,2.43e-11,54;UBERON:0004111,8.05e-11,122;UBERON:0007023,2.03e-10,51;UBERON:0001049,3.06e-10,52;UBERON:0005068,3.06e-10,52;UBERON:0006241,3.06e-10,52;UBERON:0007135,3.06e-10,52;UBERON:0004121,4.42e-10,95;UBERON:0000924,4.42e-10,95;UBERON:0006601,4.42e-10,95;UBERON:0001017,2.59e-09,73;UBERON:0003056,7.18e-09,49;UBERON:0000025,1.02e-08,114;UBERON:0001016,1.07e-08,75;UBERON:0000955,2.45e-08,47;UBERON:0006238,2.45e-08,47;UBERON:0002616,6.63e-08,46;UBERON:0002021,8.35e-08,10;UBERON:0000411,8.35e-08,10;UBERON:0001950,8.35e-08,10;UBERON:0003080,3.18e-07,40;UBERON:0002020,6.64e-07,34|phase1_expression=37.7951279167314,30.3608604646244,34.1249429542152,31.1538137646035,35.5635968261907,25.1818907867835,25.4637778249123,11.879345756625,7.46180227403834,4.21316147379588,9.58820622062828,14.6780772551419,10.9568467155972,10.8401298999557,12.9912807108108,14.5782192520675,6.29605690315332,18.9277299214943,23.4465681465813,18.2487550273153,36.9938312157154,23.2340825810072,16.4555867157529,32.4784618270616,37.1643035328815,29.860062133981,41.7839136274303,33.3980410663128,48.4559719613753,54.438508028145,35.6986122155041,7.62036808151557,4.30545351309199,15.8481681015439,20.7973166220918,19.6156881523021,17.5585646385637,26.7860243671621,26.5654017138092,27.2232346866375,24.7057224973026,19.1252735788365,21.8479658864019,34.3698313073326,37.5094645512204,48.6398893228456,17.9950009200049,14.6076854774899,12.7417985985994,33.8308024389253,15.1185335355392,11.5002051491977,13.2548258785612,9.42970784614748,9.07453257684653,21.0952737549477,37.8224140719159,39.1910790130856,31.5613678940973,24.8625760257855,15.2119536841483,7.11573517345177,6.22506357277798,8.54904731417329,7.9109309005358,5.6838409195688,8.08920298399693,15.3687322128622,27.2703680371296,17.8207838597832,18.2982716375702,44.2759025825896,39.7563373712904,20.5784542681123,14.7602025368084,14.7075005857603,95.8008164694682,91.4241340689944,81.7186756923215,28.3555518619917,29.5505088835783,34.9011958273029,68.3998347553383,100.171744585639,84.8030275161296,78.0765751505219,76.4535925891183,62.2574149056504,17.4170244666323,28.8683359607921,38.2621125086215,42.1607699720879,25.1589393471868,28.0645659651665,46.7839020562322,50.1790113549016,38.9031043764953,44.4823141928731,32.9928225845643,33.5672595784823,56.7598981700022,42.3477375467249,84.0857291031931,49.7746692207332,20.5666488960653,19.5087096415826,20.7265022456061,44.7600808498715,26.1527262483643,47.7983687788736,24.4614310740252,24.3572382649713,24.4452427091422,29.8430828294193,28.9268219553834,40.7159755908149,37.0792451601561,40.1986212237354,23.8844849026466,28.6327324406914,24.5134085491037,28.6076399349781,46.5979403045305,72.0240760648406,60.739544975902,32.6985030666997,18.9307896719354,17.9970819298022,16.2649890653523,103.655122468137,68.1675898199753,41.9685536056967,90.2148221797915,81.5732308883754,88.9332830714917,76.0911523787783,33.6069900706044,30.728521740693,53.3245020295054,41.4570456096354,32.3999902977132,30.5769798896519,34.3918667928217,38.7311381837788,45.5844544313897,44.4554609388429,51.4422467832911,58.2082584162785,18.3232793992916,22.1254113796349,26.9205219970842,26.7418793561641,28.9169139194622,26.8154168222068,34.7771810529424,27.2676945541336,16.8531164955176,19.5584409407184,28.4163499395593,39.5610225542809,31.8955441574291,41.4142741360334,35.7484550733667,34.4337405557957,34.4015661738853,42.5537118893246,31.6562613651551,32.6942958628075,39.1652442794083,44.6535502295139,47.1009783461422,45.4681960892784,39.7385708676802,43.2144668408397,78.2278608658553,49.908737003953,56.8320306732133,38.0808815995504,20.4756720513825,21.8302471548812,22.8095406540105,26.6222252502812,25.1287189544703,29.86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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:71927
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:Q99KW9
|association_with_transcript=168bp_to_ENSMUST00000034140,NM_028007,uc009mqf.2_5end
|cluster_id=chr8:88364633..88364679,-
|description=CAGE_peak_2_at_Itfg1_5end
|id=chr8:88364633..88364679,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
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|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.03e-14,92;UBERON:0002346,1.49e-12,64;UBERON:0003075,1.49e-12,64;UBERON:0007284,1.49e-12,64;UBERON:0010371,1.60e-11,73;UBERON:0000073,2.43e-11,54;UBERON:0004111,8.05e-11,122;UBERON:0007023,2.03e-10,51;UBERON:0001049,3.06e-10,52;UBERON:0005068,3.06e-10,52;UBERON:0006241,3.06e-10,52;UBERON:0007135,3.06e-10,52;UBERON:0004121,4.42e-10,95;UBERON:0000924,4.42e-10,95;UBERON:0006601,4.42e-10,95;UBERON:0001017,2.59e-09,73;UBERON:0003056,7.18e-09,49;UBERON:0000025,1.02e-08,114;UBERON:0001016,1.07e-08,75;UBERON:0000955,2.45e-08,47;UBERON:0006238,2.45e-08,47;UBERON:0002616,6.63e-08,46;UBERON:0002021,8.35e-08,10;UBERON:0000411,8.35e-08,10;UBERON:0001950,8.35e-08,10;UBERON:0003080,3.18e-07,40;UBERON:0002020,6.64e-07,34
|phase1_expression=37.7951279167314,30.3608604646244,34.1249429542152,31.1538137646035,35.5635968261907,25.1818907867835,25.4637778249123,11.879345756625,7.46180227403834,4.21316147379588,9.58820622062828,14.6780772551419,10.9568467155972,10.8401298999557,12.9912807108108,14.5782192520675,6.29605690315332,18.9277299214943,23.4465681465813,18.2487550273153,36.9938312157154,23.2340825810072,16.4555867157529,32.4784618270616,37.1643035328815,29.860062133981,41.7839136274303,33.3980410663128,48.4559719613753,54.438508028145,35.6986122155041,7.62036808151557,4.30545351309199,15.8481681015439,20.7973166220918,19.6156881523021,17.5585646385637,26.7860243671621,26.5654017138092,27.2232346866375,24.7057224973026,19.1252735788365,21.8479658864019,34.3698313073326,37.5094645512204,48.6398893228456,17.9950009200049,14.6076854774899,12.7417985985994,33.8308024389253,15.1185335355392,11.5002051491977,13.2548258785612,9.42970784614748,9.07453257684653,21.0952737549477,37.8224140719159,39.1910790130856,31.5613678940973,24.8625760257855,15.2119536841483,7.11573517345177,6.22506357277798,8.54904731417329,7.9109309005358,5.6838409195688,8.08920298399693,15.3687322128622,27.2703680371296,17.8207838597832,18.2982716375702,44.2759025825896,39.7563373712904,20.5784542681123,14.7602025368084,14.7075005857603,95.8008164694682,91.4241340689944,81.7186756923215,28.3555518619917,29.5505088835783,34.9011958273029,68.3998347553383,100.171744585639,84.8030275161296,78.0765751505219,76.4535925891183,62.2574149056504,17.4170244666323,28.8683359607921,38.2621125086215,42.1607699720879,25.1589393471868,28.0645659651665,46.7839020562322,50.1790113549016,38.9031043764953,44.4823141928731,32.9928225845643,33.5672595784823,56.7598981700022,42.3477375467249,84.0857291031931,49.7746692207332,20.5666488960653,19.5087096415826,20.7265022456061,44.7600808498715,26.1527262483643,47.7983687788736,24.4614310740252,24.3572382649713,24.4452427091422,29.8430828294193,28.9268219553834,40.7159755908149,37.0792451601561,40.1986212237354,23.8844849026466,28.6327324406914,24.5134085491037,28.6076399349781,46.5979403045305,72.0240760648406,60.739544975902,32.6985030666997,18.9307896719354,17.9970819298022,16.2649890653523,103.655122468137,68.1675898199753,41.9685536056967,90.2148221797915,81.5732308883754,88.9332830714917,76.0911523787783,33.6069900706044,30.728521740693,53.3245020295054,41.4570456096354,32.3999902977132,30.5769798896519,34.3918667928217,38.7311381837788,45.5844544313897,44.4554609388429,51.4422467832911,58.2082584162785,18.3232793992916,22.1254113796349,26.9205219970842,26.7418793561641,28.9169139194622,26.8154168222068,34.7771810529424,27.2676945541336,16.8531164955176,19.5584409407184,28.4163499395593,39.5610225542809,31.8955441574291,41.4142741360334,35.7484550733667,34.4337405557957,34.4015661738853,42.5537118893246,31.6562613651551,32.6942958628075,39.1652442794083,44.6535502295139,47.1009783461422,45.4681960892784,39.7385708676802,43.2144668408397,78.2278608658553,49.908737003953,56.8320306732133,38.0808815995504,20.4756720513825,21.8302471548812,22.8095406540105,26.6222252502812,25.1287189544703,29.8654232996718,44.1312027236396,37.3866627223505,31.668236308834,34.0215567190368,38.0179969882284,43.1433316154026,51.6569939200519,44.0102213892152,17.4494468876835,31.9895835307241,19.1603150644237,44.1923381424332,37.4328300233518,38.2240218402236,51.7274873676425,54.3205344564936,63.1134885922327,58.8604471906988,32.6097889795864,12.346537822991,13.9556886530374,15.5154857545549,16.4316698324687,13.2647437863829,12.9859184408524,21.28951417136,22.3746612949549,20.317544575918,18.6898668485561,24.5613025461212,29.6435789458833,24.5001511608698,29.6005732311155,27.4992807177119,39.1676763153202,23.6864264713106,22.0002718196735,30.2146252679835,23.2343345805617,27.1360137055742,34.0402406467,36.4899921494084,36.8866237208487,36.0987444127503,40.6609660076592,35.3944759785994,36.2638461918381,31.9674419465141,15.0791283939272,27.7391898747542,20.1623351937805,30.0771053472158,94.0826457328461,92.3628090346561,40.9837363441689,41.6577029887215,41.0160685241134,40.2151906625538,34.8985904327134,28.6762557543062,29.6322236529584,34.8184132870264,35.2185310457158,37.1164939547366,37.5523389049197,69.7267256635321,42.4400854772723,23.8607908914122,33.5547136268367,45.5317539404198,49.1157011857862,25.977528068583,25.0928552280743,33.383099116794,26.2818684663888,40.2740043806545,30.7529668870183,40.7157777014806,34.9367430817027,36.9763006784905,43.2216295157495,41.2542172992747,69.109239968019,31.6907525495106,17.5927809944546,36.2229589203391,40.7882537377229,38.3492957844452,47.554666954013,36.8402588428665,32.8540391289194,40.4599255349897,79.1696949017313,30.6688430471153,27.9333458183917,32.0864760617789,28.1718731847402,27.2473893576802,35.8521429054716,83.4413859047294,17.9414424837745,23.7344898157706,23.7048995033231,13.9392658183471,16.540001554244,15.7856939512501,18.3576704393364,17.0740771834863,17.6895966469662,47.7335309007557,29.1029114094645,27.8547669963783,29.8094740668171,28.4360082579677,35.8114604543731,33.1766292106659,35.7062928733451,39.7869031815725,48.2167700645469,45.3577698553456,15.2197093444731,25.1187797353884,24.1569396067363,26.6398128031345,24.9278459312021,31.5947954667755,31.4517399570621,27.9939427414493,28.5217416837934,30.9227674657288,25.63467055695,15.4845449107807,17.0289180843738,15.7147764462186,11.3031115990682,13.2479754793936,17.8813219303138,11.8993495024769,13.2920574457119,10.2985778947111,13.25998435797,11.998316031284,14.3263084687436,12.7961749381638,14.4927358705145,30.1551410208231,6.21560669447381,5.9211145362254,6.88326927092722,58.7296365857859,60.809122046183,35.7145667321167,39.6581501296272,49.1540661954656,92.6193021891989,92.9856977744497,114.00620717444,139.029224516043,93.1712226888073,88.381085994595,85.7278575294393,73.8526773287722,85.6439152980147,93.1968561153276,8.51056250190249,37.5083380996969,24.4149056228412,22.6089246873513,10.6902712940271,14.8913241844511,26.002867152789,26.7845574410562,32.4128401687733,33.6087291645851,37.5149363837555,31.3119726700887,29.497074853013,31.5003749831957,29.1197827604959,27.6250340944183,29.7822717678279,29.7080199514106,32.5547861634612,29.2925851067451,27.7724094432186,32.3005967209994,30.0429599333624,32.4122509090093,33.6911581886884,29.7843419778701,27.8050518766614,29.7268773924762,31.0991420707023,29.7405403978601,30.4891996579128,31.2259209130536,40.9231043169689,41.213199755467,28.3572718142278,20.4844673909116,25.4985453205495,30.0819475667618,27.1629431537758,35.2946270591225,37.7944572061287
|short_description=p2@Itfg1
}}

Revision as of 07:08, 4 August 2015

Short description:p2@Itfg1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Itfg1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 168bp_to_ENSMUST00000034140, NM_028007, uc009mqf.2_5end
EntrezGene:71927
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Itfg1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G737.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I530.36
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I634.12
CD326+ enterocyte, pool1.CNhs13542.11848-124I331.15
CD326+ enterocyte, pool2.CNhs13197.11849-124I435.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I725.18
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I825.46
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E77.46
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.21
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.59
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F114.68
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E410.96
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E810.84
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A112.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A314.58
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A56.30
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A218.93
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A423.45
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A618.25
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A336.99
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H223.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I916.46
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D132.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D237.16
GP2+ M cell, pool1.CNhs13228.11845-124H929.86
GP2+ M cell, pool2.CNhs13231.11846-124I141.78
GP2+ M cell, pool3.CNhs13240.11847-124I233.40
Ileum epithelium, pool1.CNhs13199.10252-104B948.46
Ileum epithelium, pool2.CNhs13232.10253-104C154.44
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C835.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I37.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.80
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F619.62
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G826.79
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H126.57
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H327.22
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G924.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H219.13
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H421.85
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D834.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D937.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B348.64
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B718.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C214.61
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B812.74
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C333.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C415.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C411.50
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A213.25
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I99.43
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C121.10
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E137.82
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C539.19
Mouse Granule cells, donor1.CNhs12131.11713-123C331.56
Mouse Granule cells, donor2.CNhs12357.11731-123E324.86
Mouse Granule cells, donor3.CNhs12108.11636-122C715.21
Mouse Meningeal cells, donor1.CNhs12132.11716-123C67.12
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C78.55
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E77.91
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D25.68
Mouse Microglia, donor1.CNhs12629.11718-123C88.09
Mouse Microglia, donor2.CNhs12634.11736-123E815.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.27
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.82
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D918.30
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F144.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.76
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.58
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.76
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D614.71
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D395.80
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F391.42
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D781.72
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.36
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F429.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D834.90
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E468.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5100.17
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I684.80
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D678.08
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F676.45
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E162.26
Mouse Schwann, donor1.CNhs12507.11728-123D917.42
Mouse Schwann, donor2.CNhs12573.11746-123F928.87
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G338.26
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F742.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C425.16
Mouse hepatocyte, donor3.CNhs12615.11637-122C828.06
Mouse hepatocyte, donor6.CNhs13090.11822-124F446.78
Mouse hepatocyte, donor8.CNhs13091.11824-124F650.18
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A738.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I744.48
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E332.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I833.57
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G656.76
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H142.35
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I884.09
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B649.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G120.57
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G219.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G320.73
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B644.76
accessory axillary lymph node, adult.CNhs10475.1063-29H926.15
adrenal gland, adult.CNhs10508.49-24D747.80
adrenal gland, embryo E14.CNhs11038.406-44C524.46
adrenal gland, embryo E16.CNhs11004.1254-43D624.36
adrenal gland, embryo E17.CNhs11043.1263-45I124.45
adrenal gland, embryo E18.CNhs11026.1262-18F529.84
adrenal gland, neonate N00.CNhs11191.1311-23C128.93
adrenal gland, neonate N25.CNhs11223.1377-27I340.72
amnion, adult pregnant day17.5.CNhs10488.583-22A837.08
aorta, adult.CNhs10498.46-23H140.20
bone (os femoris), adult.CNhs10483.56-12G223.88
bone (os femoris), neonate N02.CNhs11227.1985-43F528.63
bone (os femoris), neonate N16.CNhs11225.1525-43A624.51
bone (os femoris), neonate N20.CNhs11195.1350-25C328.61
cecum, adult.CNhs10467.37-13H446.60
cerebellum, adult.CNhs10494.15-8B272.02
cerebellum, neonate N30.CNhs11135.1395-42I260.74
colon, adult.CNhs10468.36-18H732.70
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C718.93
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D118.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D416.26
corpora quadrigemina, adult.CNhs10501.16-22A4103.66
corpus striatum, adult.CNhs10487.19-21D868.17
corpus striatum, neonate N00.CNhs11226.630-43F141.97
cortex, adult.CNhs10473.12-14D590.21
cortex, neonate N30.CNhs11107.1392-42F281.57
diencephalon, adult.CNhs10482.20-12F288.93
diencephalon, neonate N30.CNhs11201.1388-42B276.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B133.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A230.73
epididymis, adult.CNhs10490.58-23B253.32
eyeball, adult.CNhs10484.31-12G441.46
eyeball, embryo E12.CNhs11016.345-16C632.40
eyeball, embryo E14.CNhs10521.399-16E230.58
eyeball, embryo E15.CNhs10593.426-16C934.39
eyeball, embryo E17.CNhs11023.1261-18D438.73
eyeball, neonate N00.CNhs11207.633-15C645.58
eyeball, neonate N01.CNhs11140.1532-43E744.46
eyeball, neonate N02.CNhs11205.1551-44G851.44
eyeball, neonate N16.CNhs11188.777-19A258.21
forelimb, embryo E11.CNhs10596.335-25E218.32
forelimb, embryo E12.CNhs10600.359-14H222.13
forelimb, embryo E13.CNhs10589.384-1E226.92
forelimb, embryo E14.CNhs10577.413-26A826.74
forelimb, embryo E15.CNhs11007.437-20E728.92
forelimb, embryo E17.CNhs10598.1517-43C426.82
forelimb, embryo E18.CNhs11008.1520-43B534.78
gonad, embryo E13.CNhs11044.1564-45I627.27
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.85
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D219.56
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D528.42
heart, embryo E11.CNhs10586.331-24E939.56
heart, embryo E12.CNhs11015.353-12F531.90
heart, embryo E13.CNhs11013.376-3I941.41
heart, embryo E14.CNhs10597.403-26D435.75
heart, embryo E15.CNhs11017.431-16C834.43
heart, embryo E16.CNhs11021.457-17C634.40
heart, embryo E17.CNhs11025.479-18E542.55
heart, embryo E18.CNhs11030.1283-20G331.66
heart, neonate N00.CNhs11213.639-21E332.69
heart, neonate N03.CNhs11221.1349-25I239.17
heart, neonate N10.CNhs11118.749-24G144.65
heart, neonate N16.CNhs11209.782-15G147.10
heart, neonate N20.CNhs11127.821-26I645.47
heart, neonate N25.CNhs11196.1351-25D339.74
heart, neonate N30.CNhs11202.1390-42D243.21
hippocampus, adult.CNhs10478.13-16E878.23
hippocampus, neonate N00.CNhs11228.627-43G149.91
intestinal mucosa, adult.CNhs10506.860-29I356.83
intestine, adult.CNhs10496.178-9A338.08
intestine, embryo E12.CNhs11019.1251-16I520.48
intestine, embryo E13.CNhs11010.381-16D521.83
intestine, embryo E15.CNhs10602.976-16D822.81
intestine, embryo E16.CNhs10585.463-22H426.62
intestine, embryo E17.CNhs10582.482-18D325.13
intestine, embryo E18.CNhs10526.1289-20F729.87
intestine, neonate N00.CNhs11126.644-26D144.13
intestine, neonate N01.CNhs11192.1322-23E937.39
intestine, neonate N06.CNhs11102.688-20B831.67
intestine, neonate N07.CNhs11095.720-20F234.02
intestine, neonate N10.CNhs11098.755-23A538.02
intestine, neonate N20.CNhs11187.827-18D143.14
intestine, neonate N25.CNhs11121.1352-25E351.66
intestine, neonate N30.CNhs11131.1384-42G144.01
kidney, embryo E14.CNhs10606.411-4I917.45
kidney, embryo E15.CNhs10997.434-16F831.99
kidney, embryo E16.CNhs10584.464-22A519.16
kidney, embryo E17.CNhs11028.483-18I244.19
kidney, embryo E18.CNhs11001.1288-20C737.43
kidney, neonate N00.CNhs11214.646-21G738.22
kidney, neonate N10.CNhs11206.758-6D551.73
kidney, neonate N20.CNhs11113.832-19I154.32
kidney, neonate N25.CNhs11122.1353-25F363.11
kidney, neonate N30.CNhs11203.1385-42H158.86
liver, adult pregnant day01.CNhs10466.508-5B232.61
liver, embryo E12.CNhs10601.355-15F812.35
liver, embryo E13.CNhs10524.378-3H613.96
liver, embryo E14.CNhs10594.409-16E115.52
liver, embryo E15.CNhs10520.433-16D716.43
liver, embryo E16.CNhs10523.462-17F513.26
liver, embryo E17.CNhs10510.481-18A312.99
liver, embryo E18.CNhs10579.499-43G421.29
liver, neonate N00.CNhs11117.641-24F422.37
liver, neonate N03.CNhs11123.1345-25G220.32
liver, neonate N06.CNhs11101.684-20A818.69
liver, neonate N07.CNhs11103.716-20H224.56
liver, neonate N10.CNhs11115.751-24B929.64
liver, neonate N20.CNhs11220.823-25A324.50
liver, neonate N25.CNhs11198.1368-26H129.60
liver, neonate N30.CNhs11106.1382-42D127.50
lung, adult.CNhs10474.28-22B139.17
lung, embryo E12.CNhs10522.354-16G223.69
lung, embryo E14.CNhs10604.404-26F822.00
lung, embryo E15.CNhs11020.432-17C530.21
lung, embryo E16.CNhs10998.458-17B623.23
lung, embryo E17.CNhs10605.480-44A627.14
lung, embryo E18.CNhs10583.1287-20I634.04
lung, neonate N00.CNhs11224.640-42C636.49
lung, neonate N06.CNhs11212.683-20E536.89
lung, neonate N07.CNhs11111.715-19A336.10
lung, neonate N10.CNhs11219.750-23E640.66
lung, neonate N20.CNhs11109.822-18A435.39
lung, neonate N25.CNhs11119.1359-25C736.26
lung, neonate N30.CNhs11133.1394-42H231.97
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A127.74
mammary gland, adult lactating day02.CNhs10480.595-22B620.16
mammary gland, adult pregnant day19.CNhs10476.588-5H230.08
medulla oblongata, adult.CNhs10477.17-12C294.08
medulla oblongata, neonate N30.CNhs11200.1396-42A392.36
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C740.98
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C241.66
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E141.02
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E240.22
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E334.90
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D728.68
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D829.63
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D934.82
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D435.22
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D537.12
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D637.55
olfactory brain, adult.CNhs10489.18-22I969.73
ovary, adult.CNhs10507.91-2I742.44
ovary, embryo E18.CNhs11040.505-44H723.86
ovary, neonate N00.CNhs11217.1299-22I433.55
oviduct, adult pregnant day01.CNhs10500.988-6G645.53
pancreas, adult.CNhs10486.34-16E449.12
pancreas, embryo E14.CNhs11012.405-44F425.98
pancreas, embryo E15.CNhs11042.1556-45F225.09
pancreas, embryo E16.CNhs11003.460-26E533.38
pancreas, embryo E17.CNhs10599.1558-45G326.28
pancreas, embryo E18.CNhs10580.1535-43I740.27
pancreas, neonate N00.CNhs11105.645-26G930.75
pancreas, neonate N01.CNhs11138.1531-43D740.72
pancreas, neonate N02.CNhs11139.1539-43D834.94
pancreas, neonate N16.CNhs11136.787-43B636.98
pancreas, neonate N25.CNhs11094.1555-45E243.22
pancreas, neonate N30.CNhs11182.1548-44H541.25
pituitary gland, adult.CNhs10493.21-1G869.11
pituitary gland, embryo E12.CNhs11018.346-16E631.69
pituitary gland, embryo E13.CNhs11009.370-44C717.59
pituitary gland, embryo E14.CNhs11037.398-44A536.22
pituitary gland, embryo E15.CNhs10592.427-16B940.79
pituitary gland, embryo E16.CNhs11036.449-43F638.35
pituitary gland, embryo E17.CNhs11039.1265-44F547.55
pituitary gland, neonate N00.CNhs11190.1308-22E936.84
placenta, adult pregnant day10.CNhs10472.539-13I732.85
placenta, adult pregnant day17.CNhs10464.577-18G340.46
prostate, adult.CNhs10470.859-1F879.17
skin, adult.CNhs10492.30-1C330.67
skin, neonate N00.CNhs11124.650-25G427.93
skin, neonate N03.CNhs11215.662-22H332.09
skin, neonate N06.CNhs11097.693-20I528.17
skin, neonate N10.CNhs11108.762-6C427.25
small intestine, neonate N16.CNhs11114.790-21I135.85
spinal cord, adult.CNhs10505.24-13C983.44
spleen, adult.CNhs10465.25-2G217.94
spleen, embryo E16.CNhs11035.461-43C123.73
spleen, embryo E18.CNhs11011.1271-21F223.70
spleen, neonate N10.CNhs11116.752-24D113.94
spleen, neonate N20.CNhs11112.824-19H116.54
spleen, neonate N25.CNhs11099.1354-25G315.79
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C618.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.07
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D317.69
stomach, adult.CNhs10503.33-1H647.73
stomach, embryo E12.CNhs10588.356-43E329.10
stomach, embryo E15.CNhs10603.1252-16G827.85
stomach, embryo E16.CNhs11022.459-17D429.81
stomach, embryo E17.CNhs11006.1035-18D528.44
stomach, embryo E18.CNhs10999.1286-20C635.81
stomach, neonate N03.CNhs11193.1340-24B833.18
stomach, neonate N07.CNhs11210.718-18A935.71
stomach, neonate N25.CNhs11104.1355-25E439.79
stomach, neonate N30.CNhs11134.1386-42I148.22
submandibular gland, adult.CNhs10469.59-29C145.36
testis, adult.CNhs10504.57-7G515.22
testis, embryo E13.CNhs11031.389-23F525.12
testis, embryo E15.CNhs11034.443-27C524.16
testis, embryo E16.CNhs11033.470-26G526.64
testis, embryo E17.CNhs11029.486-18I524.93
testis, embryo E18.CNhs11027.503-18G531.59
testis, neonate N00.CNhs11189.1300-22B731.45
testis, neonate N07.CNhs11222.726-26I427.99
testis, neonate N10.CNhs11204.763-44D928.52
testis, neonate N20.CNhs11110.839-18H330.92
testis, neonate N30.CNhs11130.1391-42E225.63
thymus, adult.CNhs10471.38-12B515.48
thymus, embryo E14.CNhs11041.402-44I417.03
thymus, embryo E15.CNhs11005.430-45I215.71
thymus, embryo E16.CNhs11002.456-26C511.30
thymus, embryo E17.CNhs10581.478-18C113.25
thymus, embryo E18.CNhs10595.1273-19G417.88
thymus, neonate N02.CNhs11181.1541-43F811.90
thymus, neonate N03.CNhs11137.2104-43C713.29
thymus, neonate N06.CNhs11197.681-26C410.30
thymus, neonate N07.CNhs11211.713-19D313.26
thymus, neonate N10.CNhs11194.748-24E412.00
thymus, neonate N20.CNhs11186.820-7A214.33
thymus, neonate N25.CNhs11125.1362-25G712.80
thymus, neonate N30.CNhs11132.1393-42G214.49
tongue, adult.CNhs10499.32-1B430.16
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F75.92
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.88
urinary bladder, adult.CNhs10481.879-12E458.73
uterus, adult pregnant day19.CNhs10497.590-15F560.81
uterus, adult.CNhs10509.92-27E535.71
vagina, adult.CNhs10502.89-27D539.66
vesicular gland, adult.CNhs10491.51-27F849.15
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A192.62
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A292.99
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3114.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7139.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A493.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A588.38
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A685.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A773.85
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A885.64
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A993.20
whole body, embryo E11.CNhs11014.324-5I88.51
whole body, embryo E12.CNhs10587.857-27C937.51
whole body, embryo E13.CNhs10512.372-23H224.41
whole body, embryo E14.5.CNhs10578.420-27D222.61
whole body, embryo E14.CNhs10519.395-14B110.69
whole body, embryo E16.CNhs10514.453-14F214.89
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G526.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G526.78
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G532.41
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G533.61
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G537.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G531.31
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G529.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G531.50
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G529.12
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G527.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G529.78
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G529.71
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G532.55
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G529.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G527.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G532.30
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G530.04
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G532.41
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G533.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G529.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G527.81
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G529.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G531.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G529.74
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G530.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G531.23
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G540.92
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G541.21
whole body, embryo E17.5.CNhs10513.490-9F928.36
whole body, embryo E17.CNhs10517.475-3I520.48
whole body, embryo E18.CNhs10516.493-3B325.50
whole body, neonate N00.CNhs10525.657-19C230.08
whole body, neonate N01.CNhs10576.659-23C627.16
whole body, neonate N06.CNhs10515.692-21D135.29
whole body, neonate N10.CNhs10518.761-6B437.79





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.03e-1492
neurectoderm1.49e-1264
neural plate1.49e-1264
presumptive neural plate1.49e-1264
ecto-epithelium1.60e-1173
regional part of nervous system2.43e-1154
anatomical conduit8.05e-11122
adult organism2.03e-1051
neural tube3.06e-1052
neural rod3.06e-1052
future spinal cord3.06e-1052
neural keel3.06e-1052
ectoderm-derived structure4.42e-1095
ectoderm4.42e-1095
presumptive ectoderm4.42e-1095
central nervous system2.59e-0973
pre-chordal neural plate7.18e-0949
tube1.02e-08114
nervous system1.07e-0875
brain2.45e-0847
future brain2.45e-0847
regional part of brain6.63e-0846
occipital lobe8.35e-0810
visual cortex8.35e-0810
neocortex8.35e-0810
anterior neural tube3.18e-0740
gray matter6.64e-0734
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