FFCP PHASE1:Mm9::chr8:63472350..63472365,+: Difference between revisions
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{{FFCP|EntrezGene=18004|HGNC=|MCL_coexpression_id=0|UniProt=B2RXX0,B2RXQ4|association_with_transcript=288bp_to_ENSMUST00000165016,ENSMUST00000172204_5end|description=CAGE_peak_3_at_Nek1_5end|id=chr8:63472350..63472365,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.92e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.86e-09,22;UBERON:0007499,1.86e-09,22;UBERON:0006925,1.86e-09,22;UBERON:0009497,1.86e-09,22;UBERON:0000015,1.86e-09,22;UBERON:0002423,1.86e-09,22;UBERON:0006235,1.86e-09,22;UBERON:0008835,1.86e-09,22;UBERON:0003894,1.86e-09,22;UBERON:0004161,1.86e-09,22;UBERON:0008836,1.86e-09,22;UBERON:0009854,5.35e-09,23;UBERON:0009856,5.35e-09,23;UBERON:0002365,3.43e-08,25;UBERON:0002330,3.43e-08,25|phase1_expression=0.640595388419176,0,0.454999239389536,0.30246421130683,0.500895729946347,0.503637815735669,0.233612640595526,0.903863264091034,0,0.234064526321993,0.171217968225505,0.0797721589953364,0.856003649656029,0.174840804837995,0,0,0.699561878128147,0.315462165358238,0.137114433605739,0.42438965179803,3.23164502574065,0.496454756004426,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,2.3108129580102,0,0.612508068787107,0.837063261473815,0.7813353445238,0.523523743973798,7.05877785637217,2.04913645487534,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0.838913030288682,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0.37863096666592,0.453429360640713,1.15945795480671,1.72084775396277,0.679971333707751,0,1.94932925234301,2.68816132258401,0.280888840263504,0,0,0.35333957451034,3.66192891419369,0,0,0,0,0.253359865475099,0.505524445014783,0.79928715803342,0.517875767294343,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.150722640552623,1.41106448562846,0,0.247194967734374,0.433798070759735,0,0.647067399789637,0.220841518460394,0,0,0,0.209446706813455,0,0.599075622529601,1.79970819298022,0.508280908292259,0.449371918214468,0.457500602818626,0,0.521472960576829,0.511430914660661,0.41557608911912,0.324482526135515,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0,0,0.150704817835715,0.204109497453984,0,0.281105173679186,0,0,0.189106080167819,0,0.219195732427575,0.556094498451196,1.39300866608867,0.61734640922383,0,0.702213187313235,1.80143534980301,0.852490498186778,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0.350296027101508,0,0,0.0810688095458557,0.730999937126662,0,0.268412837520744,0.630869845692382,0.308713837137853,0,0,0.213288250535234,0,0.128867461322093,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,1.79763881730844,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,1.1858105083486,0.333690211432188,0.393117990226406,0,0.405720242777006,0,0,0,0.648540907100142,0.823684239564244,0,1.48856379067401,0.312037673114561,0.757736633841335,1.07638448113147,1.92977408545347,0.554259570499814,0,0,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0.8858587585951,0.478364305972461,0.655453258862952,0.172684981865896,0.867894351489069,0,0,0,0,0.160550589987792,0.586058432961016,0.163934945376675,0.504941854408746,0.315508219416257,0,0.646270193198397,0.716906393857656,0.668396022247182,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,0.321321316421807,0.425820255624806,0,0.162886959353576,0.989820737835213,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0.220528398054962,0.16488625294148,0.484393280087717,0,0,0,0,0.370850604021019,0.170870880797853,0,0.185194527369712,0.565105371014073,0.136694227721025,0.228778173206523,2.37969801991397,2.09927178485487,1.24379976423981,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0.404593039154462,0.495920734352016,0.523511883968059,0.259229946583586,0,9.58277995763124,0,0,0,0,0,0.234714477291508,0,0,0,5.47257011889944,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0,0.280924522409647,0.384150914429216,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.407412341537585,0,0.355905054372522,0,0,0.309873682371932,0,0.499621155875892,0,0,0.765153328275374,0.441182838239031,0.231867835620421|short_description=p3@Nek1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:18004 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:B2RXX0,uniprot:B2RXQ4 | |||
|association_with_transcript=288bp_to_ENSMUST00000165016,ENSMUST00000172204_5end | |||
|cluster_id=chr8:63472350..63472365,+ | |||
|description=CAGE_peak_3_at_Nek1_5end | |||
|id=chr8:63472350..63472365,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.92e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.86e-09,22;UBERON:0007499,1.86e-09,22;UBERON:0006925,1.86e-09,22;UBERON:0009497,1.86e-09,22;UBERON:0000015,1.86e-09,22;UBERON:0002423,1.86e-09,22;UBERON:0006235,1.86e-09,22;UBERON:0008835,1.86e-09,22;UBERON:0003894,1.86e-09,22;UBERON:0004161,1.86e-09,22;UBERON:0008836,1.86e-09,22;UBERON:0009854,5.35e-09,23;UBERON:0009856,5.35e-09,23;UBERON:0002365,3.43e-08,25;UBERON:0002330,3.43e-08,25 | |||
|phase1_expression=0.640595388419176,0,0.454999239389536,0.30246421130683,0.500895729946347,0.503637815735669,0.233612640595526,0.903863264091034,0,0.234064526321993,0.171217968225505,0.0797721589953364,0.856003649656029,0.174840804837995,0,0,0.699561878128147,0.315462165358238,0.137114433605739,0.42438965179803,3.23164502574065,0.496454756004426,0.783599367416806,0.159992422793407,0.22940928106717,0,0,0,0.190023419456374,0,0,0.635030673459631,0,0,2.3108129580102,0,0.612508068787107,0.837063261473815,0.7813353445238,0.523523743973798,7.05877785637217,2.04913645487534,0,0.125896817975577,0,0,0,0,0,0,0.139986421625363,0,0.838913030288682,0,0.336093799142464,0,0,0,0,0.528990979272033,0,0,0,0,0,0,0.299600110518405,1.53687322128622,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0.255374676170375,0,0,0.182975287204819,0,0,0.56276261003168,0.15279824777681,0.294628585473668,0.569486723196412,0.186399445825301,0.37863096666592,0.453429360640713,1.15945795480671,1.72084775396277,0.679971333707751,0,1.94932925234301,2.68816132258401,0.280888840263504,0,0,0.35333957451034,3.66192891419369,0,0,0,0,0.253359865475099,0.505524445014783,0.79928715803342,0.517875767294343,0.29688427812965,0.346970653532272,0.304465478312141,0.691846491768175,0.150722640552623,1.41106448562846,0,0.247194967734374,0.433798070759735,0,0.647067399789637,0.220841518460394,0,0,0,0.209446706813455,0,0.599075622529601,1.79970819298022,0.508280908292259,0.449371918214468,0.457500602818626,0,0.521472960576829,0.511430914660661,0.41557608911912,0.324482526135515,0.101839363850316,0.373220911830279,0.252722758433675,0,0,0,0,0.150704817835715,0.204109497453984,0,0.281105173679186,0,0,0.189106080167819,0,0.219195732427575,0.556094498451196,1.39300866608867,0.61734640922383,0,0.702213187313235,1.80143534980301,0.852490498186778,0.207125772535502,0,0,0,0,0.154267112887378,0,0,0.350296027101508,0,0,0.0810688095458557,0.730999937126662,0,0.268412837520744,0.630869845692382,0.308713837137853,0,0,0.213288250535234,0,0.128867461322093,0.605050573870028,0.22237804384487,0.190225626112559,0.474529061544512,0.164698954724011,0.251335208800269,0,0.19496408711912,1.79763881730844,0.216138049874694,0.597423819763102,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0.147610147979602,0.31399745568275,0.123397163921801,1.1858105083486,0.333690211432188,0.393117990226406,0,0.405720242777006,0,0,0,0.648540907100142,0.823684239564244,0,1.48856379067401,0.312037673114561,0.757736633841335,1.07638448113147,1.92977408545347,0.554259570499814,0,0,0,0,0.335012514883631,0.238043640886014,0.195133647857799,0,0.8858587585951,0.478364305972461,0.655453258862952,0.172684981865896,0.867894351489069,0,0,0,0,0.160550589987792,0.586058432961016,0.163934945376675,0.504941854408746,0.315508219416257,0,0.646270193198397,0.716906393857656,0.668396022247182,0.283076530788832,0.809621403349789,0.292255857911312,0.395287777946524,0.321321316421807,0.425820255624806,0,0.162886959353576,0.989820737835213,0,0,0.302323556964751,0.377210159511796,0.295301892880773,0.614870295887855,0.516856586336442,0.727067458955011,0.356497378384721,0.632073515871632,0,0,0.680879211507576,0,0,0,0.177340233642274,0,0.164549020602121,0,0,0,0.220528398054962,0.16488625294148,0.484393280087717,0,0,0,0,0.370850604021019,0.170870880797853,0,0.185194527369712,0.565105371014073,0.136694227721025,0.228778173206523,2.37969801991397,2.09927178485487,1.24379976423981,0.954670618015114,0.158167996790568,0.406638934253697,0.108005340821801,0,0,0.404593039154462,0.495920734352016,0.523511883968059,0.259229946583586,0,9.58277995763124,0,0,0,0,0,0.234714477291508,0,0,0,5.47257011889944,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0,0.515559547031063,0,0,0,0,0,0.51776031175182,0.103787347584177,0,0,0,0.209613162627982,0.183843508450014,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.760437899670719,0,0.280924522409647,0.384150914429216,0.287177344778066,0,0.231768651889711,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.25384382367503,0.182927972872773,0.526139422875686,0.407412341537585,0,0.355905054372522,0,0,0.309873682371932,0,0.499621155875892,0,0,0.765153328275374,0.441182838239031,0.231867835620421 | |||
|short_description=p3@Nek1 | |||
}} |
Revision as of 22:44, 3 August 2015
Short description: | p3@Nek1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nek1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 288bp_to_ENSMUST00000165016, ENSMUST00000172204_5end |
EntrezGene: | 18004 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.92e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 1.86e-09 | 22 |
epithelial sac | 1.86e-09 | 22 |
digestive gland | 1.86e-09 | 22 |
epithelium of foregut-midgut junction | 1.86e-09 | 22 |
anatomical boundary | 1.86e-09 | 22 |
hepatobiliary system | 1.86e-09 | 22 |
foregut-midgut junction | 1.86e-09 | 22 |
hepatic diverticulum | 1.86e-09 | 22 |
liver primordium | 1.86e-09 | 22 |
septum transversum | 1.86e-09 | 22 |
liver bud | 1.86e-09 | 22 |
digestive tract diverticulum | 5.35e-09 | 23 |
sac | 5.35e-09 | 23 |
exocrine gland | 3.43e-08 | 25 |
exocrine system | 3.43e-08 | 25 |