FFCP PHASE1:Mm9::chr7:3581179..3581218,-: Difference between revisions
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{{FFCP|EntrezGene=69714|HGNC=|MCL_coexpression_id=13|UniProt=D6RHM4,D6RHL7|association_with_transcript=0bp_to_ENSMUST00000153143,ENSMUST00000156194_5end|description=CAGE_peak_1_at_Tfpt_5end|id=chr7:3581179..3581218,-|ontology_enrichment_celltype=CL:0000117!5.08e-13!23;CL:0000337!5.08e-13!23;CL:0000221!5.31e-13!44;CL:0000133!5.31e-13!44;CL:0002319!9.21e-13!43;CL:0000055!2.80e-12!50;CL:0000540!5.45e-10!33;CL:0000047!5.45e-10!33;CL:0000031!5.45e-10!33;CL:0000404!5.45e-10!33;CL:0000393!4.89e-09!39;CL:0000211!4.89e-09!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.08e-13,23;CL:0000337,5.08e-13,23;CL:0000221,5.31e-13,44;CL:0000133,5.31e-13,44;CL:0002319,9.21e-13,43;CL:0000540,5.45e-10,33;CL:0000047,5.45e-10,33;CL:0000031,5.45e-10,33;CL:0000404,5.45e-10,33;CL:0000393,4.89e-09,39;CL:0000211,4.89e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.77e-28!73;UBERON:0005743!1.77e-28!73;UBERON:0000073!1.81e-28!75;UBERON:0001016!1.81e-28!75;UBERON:0001049!9.60e-27!52;UBERON:0005068!9.60e-27!52;UBERON:0006241!9.60e-27!52;UBERON:0007135!9.60e-27!52;UBERON:0000955!1.20e-25!50;UBERON:0006238!1.20e-25!50;UBERON:0002616!3.60e-25!49;UBERON:0000033!1.01e-22!63;UBERON:0003080!5.00e-21!40;UBERON:0002780!1.72e-20!39;UBERON:0001890!1.72e-20!39;UBERON:0006240!1.72e-20!39;UBERON:0002346!5.12e-20!71;UBERON:0003075!5.12e-20!71;UBERON:0007284!5.12e-20!71;UBERON:0002020!6.61e-20!34;UBERON:0003056!1.36e-19!49;UBERON:0004121!1.66e-17!102;UBERON:0000924!1.66e-17!102;UBERON:0006601!1.66e-17!102;UBERON:0002791!1.68e-17!29;UBERON:0003528!1.68e-17!29;UBERON:0001893!1.68e-17!29;UBERON:0000153!5.00e-15!94;UBERON:0007811!1.32e-14!86;UBERON:0000025!1.34e-13!114;UBERON:0000956!2.55e-12!21;UBERON:0001869!2.55e-12!21;UBERON:0000203!2.55e-12!21;UBERON:0004111!1.60e-11!122;UBERON:0002619!2.76e-10!17;UBERON:0002021!3.70e-07!10;UBERON:0000411!3.70e-07!10;UBERON:0001950!3.70e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.77e-28,73;UBERON:0001016,1.81e-28,75;UBERON:0000073,7.58e-28,54;UBERON:0001049,9.60e-27,52;UBERON:0005068,9.60e-27,52;UBERON:0006241,9.60e-27,52;UBERON:0007135,9.60e-27,52;UBERON:0002346,8.62e-25,64;UBERON:0003075,8.62e-25,64;UBERON:0007284,8.62e-25,64;UBERON:0000955,2.86e-24,47;UBERON:0006238,2.86e-24,47;UBERON:0002616,8.46e-24,46;UBERON:0003080,5.00e-21,40;UBERON:0004121,8.64e-21,95;UBERON:0000924,8.64e-21,95;UBERON:0006601,8.64e-21,95;UBERON:0002780,1.72e-20,39;UBERON:0001890,1.72e-20,39;UBERON:0006240,1.72e-20,39;UBERON:0010371,5.51e-20,73;UBERON:0002020,6.61e-20,34;UBERON:0003056,1.36e-19,49;UBERON:0003528,1.68e-17,29;UBERON:0002791,1.68e-17,29;UBERON:0001893,1.68e-17,29;UBERON:0010314,6.56e-17,92;UBERON:0000025,1.34e-13,114;UBERON:0000956,2.55e-12,21;UBERON:0001869,2.55e-12,21;UBERON:0000203,2.55e-12,21;UBERON:0004111,1.63e-11,122;UBERON:0002619,2.76e-10,17;UBERON:0002021,3.70e-07,10;UBERON:0000411,3.70e-07,10;UBERON:0001950,3.70e-07,10|phase1_expression=6.88640042550614,2.44282785347553,2.72999543633722,3.0246421130683,0.500895729946347,3.02182689441402,1.86890112476421,4.9066862907799,1.68946466582,2.57470978954193,3.4243593645101,3.43020283679947,2.9104124088305,3.3219752919219,3.66420737997229,5.06188168474565,5.59649502502517,3.78554598429885,2.87940310572051,1.27316895539409,3.40173160604279,5.65958421845046,4.17919662622297,1.59992422793407,2.06468352960453,5.16808767703518,2.15380998079537,2.15471232685889,2.66032787238923,2.77233142735924,3.10422714917427,2.54012269383853,3.69038872550742,0,6.06588401477677,3.49092755252834,3.47087905646027,4.18531630736908,3.906676722619,3.66466620781659,2.35292595212406,2.04913645487534,3.39857247121808,4.90997590104751,2.43304634926835,2.9367480345869,14.8654355426127,7.19483016055474,8.34807494390993,8.36048566019419,8.67915814077248,2.87505128729943,2.51673909086605,2.17608642603403,2.01656279485478,6.43148590089868,4.87106847895886,4.64104883049698,10.9250888864183,7.93486468908049,9.50747105259269,8.80995783379743,6.22506357277798,7.19919773825119,9.88866362566974,6.3943210345149,11.085204089181,15.7529505181837,6.42875596312561,13.7706057098324,12.1988477583802,5.71301968807607,11.2642955885323,9.79926393719632,10.0637744569148,8.27296907949019,8.8092704799511,6.51205424234457,8.75557239560588,12.5291973343684,17.0167017100482,15.6274011167028,13.1216009530649,11.2552522006336,9.47349136216223,8.54422897873636,10.8202477407318,9.69277118291563,4.69502398665741,4.60986516651392,5.50742528533188,9.46466264679525,2.719885334831,7.01614149129162,3.89865850468601,1.79210754838934,3.08977724289854,3.2381761289831,3.63700406444016,3.88673531961374,6.05626705039726,1.28326477414318,2.54805239706646,0,1.5154372870785,2.28023878927589,1.01104889002957,2.74041311325744,2.33044095282455,2.3750742250372,3.46970653532272,2.13125834818499,2.7673859670727,4.22023393547343,3.52766121407114,2.26199864393416,2.47194967734374,2.89198713839823,1.76922110389975,2.10296904931632,3.09178125844551,3.87900202508178,0,7.02673912827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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69714 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D6RHM4,uniprot:D6RHL7 | |||
|association_with_transcript=0bp_to_ENSMUST00000153143,ENSMUST00000156194_5end | |||
|cluster_id=chr7:3581179..3581218,- | |||
|description=CAGE_peak_1_at_Tfpt_5end | |||
|id=chr7:3581179..3581218,- | |||
|ontology_enrichment_celltype=CL:0000117!5.08e-13!23;CL:0000337!5.08e-13!23;CL:0000221!5.31e-13!44;CL:0000133!5.31e-13!44;CL:0002319!9.21e-13!43;CL:0000055!2.80e-12!50;CL:0000540!5.45e-10!33;CL:0000047!5.45e-10!33;CL:0000031!5.45e-10!33;CL:0000404!5.45e-10!33;CL:0000393!4.89e-09!39;CL:0000211!4.89e-09!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.08e-13,23;CL:0000337,5.08e-13,23;CL:0000221,5.31e-13,44;CL:0000133,5.31e-13,44;CL:0002319,9.21e-13,43;CL:0000540,5.45e-10,33;CL:0000047,5.45e-10,33;CL:0000031,5.45e-10,33;CL:0000404,5.45e-10,33;CL:0000393,4.89e-09,39;CL:0000211,4.89e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.77e-28!73;UBERON:0005743!1.77e-28!73;UBERON:0000073!1.81e-28!75;UBERON:0001016!1.81e-28!75;UBERON:0001049!9.60e-27!52;UBERON:0005068!9.60e-27!52;UBERON:0006241!9.60e-27!52;UBERON:0007135!9.60e-27!52;UBERON:0000955!1.20e-25!50;UBERON:0006238!1.20e-25!50;UBERON:0002616!3.60e-25!49;UBERON:0000033!1.01e-22!63;UBERON:0003080!5.00e-21!40;UBERON:0002780!1.72e-20!39;UBERON:0001890!1.72e-20!39;UBERON:0006240!1.72e-20!39;UBERON:0002346!5.12e-20!71;UBERON:0003075!5.12e-20!71;UBERON:0007284!5.12e-20!71;UBERON:0002020!6.61e-20!34;UBERON:0003056!1.36e-19!49;UBERON:0004121!1.66e-17!102;UBERON:0000924!1.66e-17!102;UBERON:0006601!1.66e-17!102;UBERON:0002791!1.68e-17!29;UBERON:0003528!1.68e-17!29;UBERON:0001893!1.68e-17!29;UBERON:0000153!5.00e-15!94;UBERON:0007811!1.32e-14!86;UBERON:0000025!1.34e-13!114;UBERON:0000956!2.55e-12!21;UBERON:0001869!2.55e-12!21;UBERON:0000203!2.55e-12!21;UBERON:0004111!1.60e-11!122;UBERON:0002619!2.76e-10!17;UBERON:0002021!3.70e-07!10;UBERON:0000411!3.70e-07!10;UBERON:0001950!3.70e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.77e-28,73;UBERON:0001016,1.81e-28,75;UBERON:0000073,7.58e-28,54;UBERON:0001049,9.60e-27,52;UBERON:0005068,9.60e-27,52;UBERON:0006241,9.60e-27,52;UBERON:0007135,9.60e-27,52;UBERON:0002346,8.62e-25,64;UBERON:0003075,8.62e-25,64;UBERON:0007284,8.62e-25,64;UBERON:0000955,2.86e-24,47;UBERON:0006238,2.86e-24,47;UBERON:0002616,8.46e-24,46;UBERON:0003080,5.00e-21,40;UBERON:0004121,8.64e-21,95;UBERON:0000924,8.64e-21,95;UBERON:0006601,8.64e-21,95;UBERON:0002780,1.72e-20,39;UBERON:0001890,1.72e-20,39;UBERON:0006240,1.72e-20,39;UBERON:0010371,5.51e-20,73;UBERON:0002020,6.61e-20,34;UBERON:0003056,1.36e-19,49;UBERON:0003528,1.68e-17,29;UBERON:0002791,1.68e-17,29;UBERON:0001893,1.68e-17,29;UBERON:0010314,6.56e-17,92;UBERON:0000025,1.34e-13,114;UBERON:0000956,2.55e-12,21;UBERON:0001869,2.55e-12,21;UBERON:0000203,2.55e-12,21;UBERON:0004111,1.63e-11,122;UBERON:0002619,2.76e-10,17;UBERON:0002021,3.70e-07,10;UBERON:0000411,3.70e-07,10;UBERON:0001950,3.70e-07,10 | |||
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| |||
|short_description=p1@Tfpt | |||
}} |
Revision as of 03:11, 5 August 2015
Short description: | p1@Tfpt |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tfpt_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000153143, ENSMUST00000156194_5end |
EntrezGene: | 69714 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.08e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.08e-13 | 23 |
ectodermal cell | 5.31e-13 | 44 |
neurectodermal cell | 5.31e-13 | 44 |
neural cell | 9.21e-13 | 43 |
neuron | 5.45e-10 | 33 |
neuronal stem cell | 5.45e-10 | 33 |
neuroblast | 5.45e-10 | 33 |
electrically signaling cell | 5.45e-10 | 33 |
electrically responsive cell | 4.89e-09 | 39 |
electrically active cell | 4.89e-09 | 39 |