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FFCP PHASE1:Mm9::chr7:20277978..20277997,-: Difference between revisions

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{{FFCP|EntrezGene=11812|HGNC=|MCL_coexpression_id=8|UniProt=P34928|association_with_transcript=9bp_to_ENSMUST00000045035,NM_001110009,uc009fmw.2_5end|description=CAGE_peak_1_at_Apoc1_5end|id=chr7:20277978..20277997,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!2.88e-15!25;UBERON:0002330!2.88e-15!25;UBERON:0002107!1.45e-14!22;UBERON:0007499!1.45e-14!22;UBERON:0006925!1.45e-14!22;UBERON:0009497!1.45e-14!22;UBERON:0000015!1.45e-14!22;UBERON:0002423!1.45e-14!22;UBERON:0006235!1.45e-14!22;UBERON:0008835!1.45e-14!22;UBERON:0003894!1.45e-14!22;UBERON:0004161!1.45e-14!22;UBERON:0008836!1.45e-14!22;UBERON:0009854!8.60e-14!23;UBERON:0009856!8.60e-14!23;UBERON:0005172!5.42e-12!49;UBERON:0005173!5.42e-12!49;UBERON:0002417!5.42e-12!49;UBERON:0000916!5.42e-12!49;UBERON:0005177!2.74e-11!85;UBERON:0000466!2.66e-10!79;UBERON:0009569!5.09e-10!66;UBERON:0005256!1.57e-08!47;UBERON:0000468!2.47e-08!333;UBERON:0002100!1.19e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.37e-15,25;UBERON:0002330,1.37e-15,25;UBERON:0002107,7.19e-15,22;UBERON:0007499,7.19e-15,22;UBERON:0006925,7.19e-15,22;UBERON:0009497,7.19e-15,22;UBERON:0000015,7.19e-15,22;UBERON:0002423,7.19e-15,22;UBERON:0006235,7.19e-15,22;UBERON:0008835,7.19e-15,22;UBERON:0003894,7.19e-15,22;UBERON:0004161,7.19e-15,22;UBERON:0008836,7.19e-15,22;UBERON:0009854,4.44e-14,23;UBERON:0009856,4.44e-14,23;UBERON:0005172,3.09e-12,49;UBERON:0005173,3.09e-12,49;UBERON:0002417,3.09e-12,49;UBERON:0000916,3.09e-12,49;UBERON:0005177,2.07e-11,79;UBERON:0009569,3.15e-10,66;UBERON:0005256,7.11e-10,45;UBERON:0002100,2.69e-08,90|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,7.66152452176024,4.45445588257617,6.99561878128147,0.473193248037357,1.23402990245165,2.54633791078818,15.2227489370415,0,0,0,0.22940928106717,0,0,0.215471232685889,1.33016393619462,0.252030129759931,0.221730510655305,1.90509202037889,4.92051830067656,0,0,0,0,0.837063261473815,0,0.523523743973798,0,1.36609096991689,0.485510353031154,0,0,0.183546752161682,0.782391344348039,4.36050312760893,0.878744730937887,0.388859798148567,2.09979632438044,2.87505128729943,0,0,0,0.257259436035947,1.14613375975503,10.8291139378263,0.202316460859598,0,0,0,0,1.7997994345628,0.988866362566974,2.8419204597844,95.2728351448527,309.295735783851,0.207379224616955,0.540023753326763,0.210324961351382,23.9946826899195,22.307722636113,0,0.0958454710182364,0,6.60695285996332,4.46905683298157,15.8214729253931,0.659431438650969,0.274462930807229,0,10.3297709630511,18.5711661310454,15.5854212732346,4.71405736757868,7.26095572075425,1.3047961207771,0.227178579999552,0.0755715601067855,93.0465008732386,7727.46683916983,6261.85601211467,9266.16409722968,9977.96666632641,8569.41026951074,1704.15259387868,0,0,0,0.845060518660083,0,0,0,0.432982082022428,0.253359865475099,0,2128.61588572272,3.36619248741323,30.7275227864187,15.26670875542,32.5778061793991,43.355713484139,49.135580820155,34.1007250693544,87.8409473394432,638.257406690153,177.712609654571,1.76922110389975,0.323533699894818,3.97514733228708,1.45462575940567,1.86391761218122,1.46390398505774,2.09446706813455,0,0.718890747035522,1.19980546198682,0.635351135365324,1.9472783122627,0.457500602818626,0.376963056338593,0.347648640384553,0,3.53239675751252,2.43361894601636,1.83310854930569,23.2641035040874,61.1589075409493,236.95752972817,0.650602214813519,1.37941262660084,1.80062129805349,17.1803492332715,0.816437989815934,0.512454881139399,1.87403449119458,46.5666067330228,0.646703978798527,2.26927296201383,0.879755620819744,3.94552318369635,5.00485048606076,10.7958171621872,14.8163138213719,4.57778813682534,1.40442637462647,2.31613116403244,1.13665399758237,1.65700618028402,3.98694301967864,0.900310307305074,0.946978942340841,1.77087808572663,2.31400669331067,2.09280550275367,0.804820204198858,1.16765342367169,1.31647879930784,3.11918181750281,5.99909190639332,2.33919979880532,10.0993053033883,6.71032093801859,1.05144974282064,0.514523061896422,0.330418782983798,0.793351699990633,1.70630600428187,3.48355007790658,3.22168653305233,6.85723983719365,7.78323153457046,15.2180500890047,1.42358718463353,10.8701310117847,14.8287773192159,10.3457365461398,9.16331209459865,0.898819408654221,0.432276099749388,2.78797782556114,2.84501851429623,5.02693455482807,2.25415471346161,2.64746726198909,3.29719228184964,4.48869247298039,3.85742876457969,3.98547399544926,4.86696056308262,3.70191491765402,7889.49376467029,37.7069938918373,48.7466307880743,87.696223830093,145.653567156945,291.824363300424,590.222724429331,1128.34425108208,666.53791727217,1968.87989397173,931.617978297257,2020.72534583997,4258.69016266752,4399.16631720485,5418.16068318879,4716.85030836964,13.3022296919955,1.70542270593436,2.11854469374634,1.86719594352707,3.28566347603903,3.1826188913945,19.9956658344252,14.0496226457615,5.67486518782288,5.53661724121937,8.13219320153184,16.222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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:11812
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=uniprot:P34928
|association_with_transcript=9bp_to_ENSMUST00000045035,NM_001110009,uc009fmw.2_5end
|cluster_id=chr7:20277978..20277997,-
|description=CAGE_peak_1_at_Apoc1_5end
|id=chr7:20277978..20277997,-
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|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.37e-15,25;UBERON:0002330,1.37e-15,25;UBERON:0002107,7.19e-15,22;UBERON:0007499,7.19e-15,22;UBERON:0006925,7.19e-15,22;UBERON:0009497,7.19e-15,22;UBERON:0000015,7.19e-15,22;UBERON:0002423,7.19e-15,22;UBERON:0006235,7.19e-15,22;UBERON:0008835,7.19e-15,22;UBERON:0003894,7.19e-15,22;UBERON:0004161,7.19e-15,22;UBERON:0008836,7.19e-15,22;UBERON:0009854,4.44e-14,23;UBERON:0009856,4.44e-14,23;UBERON:0005172,3.09e-12,49;UBERON:0005173,3.09e-12,49;UBERON:0002417,3.09e-12,49;UBERON:0000916,3.09e-12,49;UBERON:0005177,2.07e-11,79;UBERON:0009569,3.15e-10,66;UBERON:0005256,7.11e-10,45;UBERON:0002100,2.69e-08,90
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,7.66152452176024,4.45445588257617,6.99561878128147,0.473193248037357,1.23402990245165,2.54633791078818,15.2227489370415,0,0,0,0.22940928106717,0,0,0.215471232685889,1.33016393619462,0.252030129759931,0.221730510655305,1.90509202037889,4.92051830067656,0,0,0,0,0.837063261473815,0,0.523523743973798,0,1.36609096991689,0.485510353031154,0,0,0.183546752161682,0.782391344348039,4.36050312760893,0.878744730937887,0.388859798148567,2.09979632438044,2.87505128729943,0,0,0,0.257259436035947,1.14613375975503,10.8291139378263,0.202316460859598,0,0,0,0,1.7997994345628,0.988866362566974,2.8419204597844,95.2728351448527,309.295735783851,0.207379224616955,0.540023753326763,0.210324961351382,23.9946826899195,22.307722636113,0,0.0958454710182364,0,6.60695285996332,4.46905683298157,15.8214729253931,0.659431438650969,0.274462930807229,0,10.3297709630511,18.5711661310454,15.5854212732346,4.71405736757868,7.26095572075425,1.3047961207771,0.227178579999552,0.0755715601067855,93.0465008732386,7727.46683916983,6261.85601211467,9266.16409722968,9977.96666632641,8569.41026951074,1704.15259387868,0,0,0,0.845060518660083,0,0,0,0.432982082022428,0.253359865475099,0,2128.61588572272,3.36619248741323,30.7275227864187,15.26670875542,32.5778061793991,43.355713484139,49.135580820155,34.1007250693544,87.8409473394432,638.257406690153,177.712609654571,1.76922110389975,0.323533699894818,3.97514733228708,1.45462575940567,1.86391761218122,1.46390398505774,2.09446706813455,0,0.718890747035522,1.19980546198682,0.635351135365324,1.9472783122627,0.457500602818626,0.376963056338593,0.347648640384553,0,3.53239675751252,2.43361894601636,1.83310854930569,23.2641035040874,61.1589075409493,236.95752972817,0.650602214813519,1.37941262660084,1.80062129805349,17.1803492332715,0.816437989815934,0.512454881139399,1.87403449119458,46.5666067330228,0.646703978798527,2.26927296201383,0.879755620819744,3.94552318369635,5.00485048606076,10.7958171621872,14.8163138213719,4.57778813682534,1.40442637462647,2.31613116403244,1.13665399758237,1.65700618028402,3.98694301967864,0.900310307305074,0.946978942340841,1.77087808572663,2.31400669331067,2.09280550275367,0.804820204198858,1.16765342367169,1.31647879930784,3.11918181750281,5.99909190639332,2.33919979880532,10.0993053033883,6.71032093801859,1.05144974282064,0.514523061896422,0.330418782983798,0.793351699990633,1.70630600428187,3.48355007790658,3.22168653305233,6.85723983719365,7.78323153457046,15.2180500890047,1.42358718463353,10.8701310117847,14.8287773192159,10.3457365461398,9.16331209459865,0.898819408654221,0.432276099749388,2.78797782556114,2.84501851429623,5.02693455482807,2.25415471346161,2.64746726198909,3.29719228184964,4.48869247298039,3.85742876457969,3.98547399544926,4.86696056308262,3.70191491765402,7889.49376467029,37.7069938918373,48.7466307880743,87.696223830093,145.653567156945,291.824363300424,590.222724429331,1128.34425108208,666.53791727217,1968.87989397173,931.617978297257,2020.72534583997,4258.69016266752,4399.16631720485,5418.16068318879,4716.85030836964,13.3022296919955,1.70542270593436,2.11854469374634,1.86719594352707,3.28566347603903,3.1826188913945,19.9956658344252,14.0496226457615,5.67486518782288,5.53661724121937,8.13219320153184,16.2224681568581,14.6782234586011,14.4649058581512,1.50791283939272,1.08781136763742,39.3411418415229,43.8739426624525,2.24770825982909,2.81308047821288,0,15.9056684138755,12.304820557234,1.17131623288992,1.72338718186239,0.955875191810208,1.33679204449436,11.889214293131,5.66734982344852,5.26060544240361,0.790575555893047,0.963963949265421,4.68402281187286,26.531774946421,3.74640006513225,0.989820737835213,1.32745138339963,9.46844481004428,9.37203026590728,8.11001842950362,9.44966057218473,15.3717573971964,9.30341855405596,10.5424781548477,19.9638531895444,8.84902922220285,7.37930260024991,7.21948802737308,1.02131881726136,0.900305470156551,0.646793418913773,1.07168517515796,1.59606210278046,1.07021290561242,0.658196082408484,1.2178597964584,6.57080782578389,27.9618333540243,17.421743446342,95.7989129589999,22.7664841641227,33.3530474852702,30.7980647528092,19.0403443704271,3.20628920292836,2.78137953015765,5.29699730473343,8.2554747185289,4.25947412950337,4.1441060541032,1.6403307326523,3.88922894451088,0,0,0,34.3681422485441,2.68885594543965,5.28630614529807,4.32021363287205,6.48173717644853,18.9975430459175,65.9486653821773,278.872759617283,16.2288684030098,1.68499465279331,22.9895545842163,9.58277995763124,13.0079395058262,17.5385999884523,10.5003641705786,11.2369046425626,10.4752797804282,7.04143431874524,59.6336082585292,0.734015410979976,0.724752362478018,5.76060012515731,11.6924114632426,4.86540516696394,4.10843828659309,1.68897069871134,2.50637373934474,3.3775830312815,2.64429988943931,3.10148007066612,4.74542314756294,1.98137697303,4.03304740547362,8.77120926657772,7.31209996466504,8.41513695707296,10.2028672626845,19.0907919901696,6.9976808155391,26.8615386182526,20.28490737338,0.93841237725591,1.64836461840539,11.3615240911905,2.50786052017682,1.12950368523413,0.460325236507177,0,0,0.685082519770642,0,0.675022500231806,0.900642406448441,0,0,0.31136204275253,3.19219898720825,8.19521307619844,41.0850351845417,25.7824190032418,65.264445499755,74.4526538135411,66.7553585454017,50.0633966963232,52.8137172586337,63.3698249725599,54.513012660576,57.2149610640982,51.2841470763003,46.8673426677804,67.6337041621965,58.0580472983726,65.5891349576597,58.5161979140695,111.282383621604,82.2886205724997,70.990322463735,63.4240265259874,71.3650905664733,67.1940976165461,51.6995254218143,53.2320401059768,96.2835143862505,68.8526857198519,61.7256498823512,70.825105820132,50.2372860115374,78.5723602885804,60.1154943801548,73.690325394796,7.24450676020043,99.654865197744,93.8986506191064,33.4754581120476,47.8683379489349,39.8812677267125
|short_description=p1@Apoc1
}}

Revision as of 18:17, 4 August 2015

Short description:p1@Apoc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Apoc1_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 9bp_to_ENSMUST00000045035, NM_001110009, uc009fmw.2_5end
EntrezGene:11812
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Apoc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A17.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A34.45
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.23
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.55
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A315.22
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.92
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.36
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.83
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.84
Mouse Microglia, donor1.CNhs12629.11718-123C895.27
Mouse Microglia, donor2.CNhs12634.11736-123E8309.30
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F123.99
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D522.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D36.61
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.33
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E518.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G393.05
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77727.47
Mouse hepatocyte, donor1.CNhs13078.11714-123C46261.86
Mouse hepatocyte, donor3.CNhs12615.11637-122C89266.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F49977.97
Mouse hepatocyte, donor8.CNhs13091.11824-124F68569.41
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71704.15
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62128.62
accessory axillary lymph node, adult.CNhs10475.1063-29H93.37
adrenal gland, adult.CNhs10508.49-24D730.73
adrenal gland, embryo E14.CNhs11038.406-44C515.27
adrenal gland, embryo E16.CNhs11004.1254-43D632.58
adrenal gland, embryo E17.CNhs11043.1263-45I143.36
adrenal gland, embryo E18.CNhs11026.1262-18F549.14
adrenal gland, neonate N00.CNhs11191.1311-23C134.10
adrenal gland, neonate N25.CNhs11223.1377-27I387.84
amnion, adult pregnant day17.5.CNhs10488.583-22A8638.26
aorta, adult.CNhs10498.46-23H1177.71
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.72
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F23.53
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A223.26
epididymis, adult.CNhs10490.58-23B261.16
eyeball, adult.CNhs10484.31-12G4236.96
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D417.18
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A246.57
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H22.27
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A83.95
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B514.82
gonad, embryo E13.CNhs11044.1564-45I64.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.32
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E91.66
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C62.31
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G13.12
heart, neonate N16.CNhs11209.782-15G16.00
heart, neonate N20.CNhs11127.821-26I62.34
heart, neonate N25.CNhs11196.1351-25D310.10
heart, neonate N30.CNhs11202.1390-42D26.71
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I51.71
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D83.22
intestine, embryo E16.CNhs10585.463-22H46.86
intestine, embryo E17.CNhs10582.482-18D37.78
intestine, embryo E18.CNhs10526.1289-20F715.22
intestine, neonate N00.CNhs11126.644-26D11.42
intestine, neonate N01.CNhs11192.1322-23E910.87
intestine, neonate N06.CNhs11102.688-20B814.83
intestine, neonate N07.CNhs11095.720-20F210.35
intestine, neonate N10.CNhs11098.755-23A59.16
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G12.79
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F85.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.65
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G74.49
kidney, neonate N10.CNhs11206.758-6D53.86
kidney, neonate N20.CNhs11113.832-19I13.99
kidney, neonate N25.CNhs11122.1353-25F34.87
kidney, neonate N30.CNhs11203.1385-42H13.70
liver, adult pregnant day01.CNhs10466.508-5B27889.49
liver, embryo E12.CNhs10601.355-15F837.71
liver, embryo E13.CNhs10524.378-3H648.75
liver, embryo E14.CNhs10594.409-16E187.70
liver, embryo E15.CNhs10520.433-16D7145.65
liver, embryo E16.CNhs10523.462-17F5291.82
liver, embryo E17.CNhs10510.481-18A3590.22
liver, embryo E18.CNhs10579.499-43G41128.34
liver, neonate N00.CNhs11117.641-24F4666.54
liver, neonate N03.CNhs11123.1345-25G21968.88
liver, neonate N06.CNhs11101.684-20A8931.62
liver, neonate N07.CNhs11103.716-20H22020.73
liver, neonate N10.CNhs11115.751-24B94258.69
liver, neonate N20.CNhs11220.823-25A34399.17
liver, neonate N25.CNhs11198.1368-26H15418.16
liver, neonate N30.CNhs11106.1382-42D14716.85
lung, adult.CNhs10474.28-22B113.30
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I620.00
lung, neonate N00.CNhs11224.640-42C614.05
lung, neonate N06.CNhs11212.683-20E55.67
lung, neonate N07.CNhs11111.715-19A35.54
lung, neonate N10.CNhs11219.750-23E68.13
lung, neonate N20.CNhs11109.822-18A416.22
lung, neonate N25.CNhs11119.1359-25C714.68
lung, neonate N30.CNhs11133.1394-42H214.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B639.34
mammary gland, adult pregnant day19.CNhs10476.588-5H243.87
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.91
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E112.30
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.96
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.89
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I74.68
ovary, embryo E18.CNhs11040.505-44H726.53
ovary, neonate N00.CNhs11217.1299-22I43.75
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F49.47
pancreas, embryo E15.CNhs11042.1556-45F29.37
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G39.45
pancreas, embryo E18.CNhs10580.1535-43I715.37
pancreas, neonate N00.CNhs11105.645-26G99.30
pancreas, neonate N01.CNhs11138.1531-43D710.54
pancreas, neonate N02.CNhs11139.1539-43D819.96
pancreas, neonate N16.CNhs11136.787-43B68.85
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I76.57
placenta, adult pregnant day17.CNhs10464.577-18G327.96
prostate, adult.CNhs10470.859-1F817.42
skin, adult.CNhs10492.30-1C395.80
skin, neonate N00.CNhs11124.650-25G422.77
skin, neonate N03.CNhs11215.662-22H333.35
skin, neonate N06.CNhs11097.693-20I530.80
skin, neonate N10.CNhs11108.762-6C419.04
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G25.30
spleen, embryo E16.CNhs11035.461-43C18.26
spleen, embryo E18.CNhs11011.1271-21F24.26
spleen, neonate N10.CNhs11116.752-24D14.14
spleen, neonate N20.CNhs11112.824-19H11.64
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H634.37
stomach, embryo E12.CNhs10588.356-43E32.69
stomach, embryo E15.CNhs10603.1252-16G85.29
stomach, embryo E16.CNhs11022.459-17D44.32
stomach, embryo E17.CNhs11006.1035-18D56.48
stomach, embryo E18.CNhs10999.1286-20C619.00
stomach, neonate N03.CNhs11193.1340-24B865.95
stomach, neonate N07.CNhs11210.718-18A9278.87
stomach, neonate N25.CNhs11104.1355-25E416.23
stomach, neonate N30.CNhs11134.1386-42I11.68
submandibular gland, adult.CNhs10469.59-29C122.99
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F513.01
testis, embryo E15.CNhs11034.443-27C517.54
testis, embryo E16.CNhs11033.470-26G510.50
testis, embryo E17.CNhs11029.486-18I511.24
testis, embryo E18.CNhs11027.503-18G510.48
testis, neonate N00.CNhs11189.1300-22B77.04
testis, neonate N07.CNhs11222.726-26I459.63
testis, neonate N10.CNhs11204.763-44D90.73
testis, neonate N20.CNhs11110.839-18H30.72
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B511.69
thymus, embryo E14.CNhs11041.402-44I44.87
thymus, embryo E15.CNhs11005.430-45I24.11
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C12.51
thymus, embryo E18.CNhs10595.1273-19G43.38
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C73.10
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D31.98
thymus, neonate N10.CNhs11194.748-24E44.03
thymus, neonate N20.CNhs11186.820-7A28.77
thymus, neonate N25.CNhs11125.1362-25G77.31
thymus, neonate N30.CNhs11132.1393-42G28.42
tongue, adult.CNhs10499.32-1B410.20
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H319.09
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F77.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G526.86
urinary bladder, adult.CNhs10481.879-12E420.28
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D511.36
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H28.20
whole body, embryo E14.5.CNhs10578.420-27D241.09
whole body, embryo E14.CNhs10519.395-14B125.78
whole body, embryo E16.CNhs10514.453-14F265.26
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G574.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G566.76
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G550.06
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G552.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G563.37
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G554.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G557.21
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G551.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G546.87
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G567.63
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G558.06
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G565.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G558.52
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5111.28
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G582.29
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G570.99
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G563.42
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G571.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G567.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G551.70
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G553.23
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G596.28
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G568.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G561.73
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G570.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G550.24
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G578.57
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G560.12
whole body, embryo E17.5.CNhs10513.490-9F973.69
whole body, embryo E17.CNhs10517.475-3I57.24
whole body, embryo E18.CNhs10516.493-3B399.65
whole body, neonate N00.CNhs10525.657-19C293.90
whole body, neonate N01.CNhs10576.659-23C633.48
whole body, neonate N06.CNhs10515.692-21D147.87
whole body, neonate N10.CNhs10518.761-6B439.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland1.37e-1525
exocrine system1.37e-1525
liver7.19e-1522
epithelial sac7.19e-1522
digestive gland7.19e-1522
epithelium of foregut-midgut junction7.19e-1522
anatomical boundary7.19e-1522
hepatobiliary system7.19e-1522
foregut-midgut junction7.19e-1522
hepatic diverticulum7.19e-1522
liver primordium7.19e-1522
septum transversum7.19e-1522
liver bud7.19e-1522
digestive tract diverticulum4.44e-1423
sac4.44e-1423
abdomen element3.09e-1249
abdominal segment element3.09e-1249
abdominal segment of trunk3.09e-1249
abdomen3.09e-1249
trunk region element2.07e-1179
subdivision of trunk3.15e-1066
trunk mesenchyme7.11e-1045
trunk2.69e-0890
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