FFCP PHASE1:Hg19::chrX:80065355..80065384,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254065 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17342 | |||
|TSSclassifier=strong | |||
|UniProt=Q6RI45 | |||
|association_with_transcript=-122bp_to_NM_153252,uc004edt.2,uc004edu.2,uc004edv.2,uc004edw.2,uc004edx.2,uc004edy.2,uc004edz.2,uc004eea.2,uc004eeb.2_5end | |||
|description=CAGE_peak_2_at_BRWD3_5end | |||
|id=chrX:80065355..80065384,- | |||
|ontology_enrichment_celltype=CL:0000766!1.01e-18!76;CL:0002057!5.75e-18!42;CL:0000557!5.88e-18!71;CL:0000860!1.02e-17!45;CL:0000763!3.51e-17!112;CL:0000049!3.51e-17!112;CL:0002009!3.02e-16!65;CL:0000839!1.01e-15!70;CL:0002194!1.09e-15!63;CL:0000576!1.09e-15!63;CL:0000040!1.09e-15!63;CL:0000559!1.09e-15!63;CL:0000738!1.56e-13!140;CL:0000037!5.47e-13!172;CL:0000566!5.47e-13!172;CL:0002032!2.20e-12!165;CL:0000837!2.20e-12!165;CL:0000988!1.11e-11!182;CL:0002031!2.21e-10!124;CL:0002087!1.41e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.86e-16;33!CL:0002057;5.86e-16;33!CL:0000576;1.06e-12;48!CL:0000473;2.10e-12;39!CL:0000234;2.10e-12;39!CL:0000766;2.37e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.83e-20,72;CL:0000860,2.92e-20,42;CL:0002057,2.92e-20,42;CL:0000557,1.08e-19,67;CL:0000473,1.42e-18,48;CL:0000234,1.42e-18,48;CL:0000763,3.20e-18,108;CL:0000049,3.20e-18,108;CL:0002009,9.51e-18,61;CL:0000839,3.85e-17,66;CL:0002194,4.09e-17,59;CL:0000576,4.09e-17,59;CL:0000040,4.09e-17,59;CL:0000559,4.09e-17,59;CL:0000738,3.10e-13,136;CL:0000037,1.77e-12,168;CL:0002032,6.38e-12,161;CL:0000837,6.38e-12,161;CL:0000988,1.82e-11,177;CL:0002031,5.29e-10,120;CL:0002087,5.20e-09,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.04e-21!115;UBERON:0002390!2.06e-18!102;UBERON:0003061!2.06e-18!102;UBERON:0002193!1.38e-16!112;UBERON:0002371!2.55e-13!80;UBERON:0001474!1.28e-12!86;UBERON:0001049!1.31e-10!57;UBERON:0005068!1.31e-10!57;UBERON:0006241!1.31e-10!57;UBERON:0007135!1.31e-10!57;UBERON:0003080!2.46e-10!42;UBERON:0002780!4.48e-10!41;UBERON:0001890!4.48e-10!41;UBERON:0006240!4.48e-10!41;UBERON:0001017!5.42e-10!82;UBERON:0005743!2.72e-09!86;UBERON:0000073!2.76e-09!94;UBERON:0001016!2.76e-09!94;UBERON:0002405!3.60e-09!115;UBERON:0004765!4.22e-09!101;UBERON:0001434!4.22e-09!101;UBERON:0002020!1.13e-08!34;UBERON:0003528!1.13e-08!34;UBERON:0002616!3.25e-08!59;UBERON:0000955!4.26e-08!69;UBERON:0006238!4.26e-08!69;UBERON:0002791!5.86e-08!33;UBERON:0001893!8.57e-08!34;UBERON:0001869!9.97e-08!32;UBERON:0002619!3.80e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;6.93e-10;49!UBERON:0002780;3.02e-08;41!UBERON:0001890;3.02e-08;41!UBERON:0002619;3.22e-08;22!UBERON:0003528;8.09e-08;34!UBERON:0002020;8.09e-08;34!UBERON:0002791;1.08e-07;32!UBERON:0001950;1.29e-07;20!UBERON:0001869;1.67e-07;32!UBERON:0003135;2.04e-07;11!UBERON:0001893;2.56e-07;34!UBERON:0000178;5.21e-07;15!UBERON:0000179;5.21e-07;15!UBERON:0000463;5.21e-07;15!UBERON:0000956;7.69e-07;25!UBERON:0000203;7.69e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.35e-21,114;UBERON:0002390,1.66e-20,98;UBERON:0003061,1.66e-20,98;UBERON:0002193,1.35e-18,108;UBERON:0002371,9.99e-15,76;UBERON:0002405,1.10e-13,93;UBERON:0001474,2.48e-13,82;UBERON:0002780,1.54e-10,41;UBERON:0001890,1.54e-10,41;UBERON:0003080,1.54e-10,41;UBERON:0006240,1.54e-10,41;UBERON:0001049,3.47e-10,56;UBERON:0005068,3.47e-10,56;UBERON:0006241,3.47e-10,56;UBERON:0007135,3.47e-10,56;UBERON:0004765,4.62e-10,90;UBERON:0001017,1.53e-09,81;UBERON:0000073,3.95e-09,53;UBERON:0002616,3.95e-09,53;UBERON:0001016,5.55e-09,89;UBERON:0003528,6.01e-09,34;UBERON:0002020,6.01e-09,34;UBERON:0001434,2.39e-08,100;UBERON:0002791,3.11e-08,32;UBERON:0001893,5.45e-08,34;UBERON:0002619,6.25e-08,22;UBERON:0001869,6.70e-08,32;UBERON:0000955,2.07e-07,68;UBERON:0006238,2.07e-07,68;UBERON:0003135,2.32e-07,11;UBERON:0001950,2.60e-07,20;UBERON:0002346,7.47e-07,86 | |||
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| |||
|short_description=p2@BRWD3 | |||
}} |
Revision as of 06:12, 23 January 2014
Short description: | p2@BRWD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_BRWD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -122bp_to_NM_153252, uc004edt.2, uc004edu.2, uc004edv.2, uc004edw.2, uc004edx.2, uc004edy.2, uc004edz.2, uc004eea.2, uc004eeb.2_5end |
EntrezGene: | BRWD3 |
HGNC: | 17342 |
UniProt: | Q6RI45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.83e-20 | 72 |
classical monocyte | 2.92e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.92e-20 | 42 |
granulocyte monocyte progenitor cell | 1.08e-19 | 67 |
defensive cell | 1.42e-18 | 48 |
phagocyte | 1.42e-18 | 48 |
myeloid cell | 3.20e-18 | 108 |
common myeloid progenitor | 3.20e-18 | 108 |
macrophage dendritic cell progenitor | 9.51e-18 | 61 |
myeloid lineage restricted progenitor cell | 3.85e-17 | 66 |
monopoietic cell | 4.09e-17 | 59 |
monocyte | 4.09e-17 | 59 |
monoblast | 4.09e-17 | 59 |
promonocyte | 4.09e-17 | 59 |
leukocyte | 3.10e-13 | 136 |
hematopoietic stem cell | 1.77e-12 | 168 |
hematopoietic oligopotent progenitor cell | 6.38e-12 | 161 |
hematopoietic multipotent progenitor cell | 6.38e-12 | 161 |
hematopoietic cell | 1.82e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 5.29e-10 | 120 |
nongranular leukocyte | 5.20e-09 | 115 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.35e-21 | 114 |
hematopoietic system | 1.66e-20 | 98 |
blood island | 1.66e-20 | 98 |
hemolymphoid system | 1.35e-18 | 108 |
bone marrow | 9.99e-15 | 76 |
immune system | 1.10e-13 | 93 |
bone element | 2.48e-13 | 82 |
regional part of forebrain | 1.54e-10 | 41 |
forebrain | 1.54e-10 | 41 |
anterior neural tube | 1.54e-10 | 41 |
future forebrain | 1.54e-10 | 41 |
neural tube | 3.47e-10 | 56 |
neural rod | 3.47e-10 | 56 |
future spinal cord | 3.47e-10 | 56 |
neural keel | 3.47e-10 | 56 |
skeletal element | 4.62e-10 | 90 |
central nervous system | 1.53e-09 | 81 |
regional part of nervous system | 3.95e-09 | 53 |
regional part of brain | 3.95e-09 | 53 |
nervous system | 5.55e-09 | 89 |
brain grey matter | 6.01e-09 | 34 |
gray matter | 6.01e-09 | 34 |
skeletal system | 2.39e-08 | 100 |
regional part of telencephalon | 3.11e-08 | 32 |
telencephalon | 5.45e-08 | 34 |
regional part of cerebral cortex | 6.25e-08 | 22 |
cerebral hemisphere | 6.70e-08 | 32 |
brain | 2.07e-07 | 68 |
future brain | 2.07e-07 | 68 |
male reproductive organ | 2.32e-07 | 11 |
neocortex | 2.60e-07 | 20 |
neurectoderm | 7.47e-07 | 86 |