FFCP PHASE1:Hg19::chrX:64898254..64898286,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4478 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7373 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=17bp_to_uc010nkp.1_5end | |||
|description=CAGE_peak_4_at_MSN_5end | |||
|id=chrX:64898254..64898286,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.82e-26!119;CL:0000213!1.79e-20!57;CL:0000215!1.79e-20!57;CL:0000359!4.40e-17!32;CL:0000077!4.62e-15!19;CL:0000076!1.37e-14!62;CL:0000220!1.69e-14!246;CL:0002321!4.16e-14!248;CL:0000071!1.03e-11!18;CL:0002546!1.03e-11!18;CL:0000192!1.88e-11!42;CL:0000514!1.88e-11!42;CL:0002139!1.94e-11!24;CL:0000055!7.50e-11!180;CL:0000187!3.30e-09!54;CL:0002078!5.39e-09!44;CL:0000680!8.96e-09!57;CL:0000056!8.96e-09!57;CL:0000355!8.96e-09!57;CL:0000115!1.39e-08!35;CL:0002494!1.76e-08!16;CL:0000183!3.39e-08!59;CL:0000057!4.71e-08!75;CL:1000413!7.03e-08!9;CL:0000548!7.77e-08!679;CL:0000004!7.77e-08!679;CL:0000255!7.77e-08!679;CL:0000393!9.64e-08!60;CL:0000211!9.64e-08!60;CL:0000012!1.58e-07!682;CL:0002334!1.65e-07!12;CL:0000144!3.74e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000077;2.45e-26;19!CL:0000359;2.41e-15;32!CL:0000213;1.83e-11;58!CL:0000215;1.83e-11;58!CL:1000413;4.13e-08;9!CL:0000192;4.43e-08;43!CL:0002592;5.28e-08;3!CL:0000076;1.32e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.60e-26,19;CL:0000222,3.23e-25,121;CL:0000213,1.62e-20,58;CL:0000215,1.62e-20,58;CL:0000359,2.26e-16,32;CL:0000076,8.19e-14,63;CL:0000192,5.00e-11,43;CL:0000514,5.00e-11,43;CL:0002321,1.85e-09,250;CL:0000187,1.01e-08,55;CL:1000413,2.69e-08,9;CL:0000680,4.81e-08,58;CL:0000056,4.81e-08,58;CL:0000355,4.81e-08,58;CL:0002592,5.99e-08,3;CL:0000393,1.94e-07,61;CL:0000211,1.94e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;4.43e-08;43!CL:0000222;9.99e-08;121 | |||
|ontology_enrichment_disease=DOID:2394!1.01e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.50e-17;14!DOID:0060084;3.34e-08;3!DOID:127;3.34e-08;3!DOID:120;9.04e-08;27!DOID:193;4.51e-07;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.92e-17,14;DOID:0060084,3.67e-08,3;DOID:127,3.67e-08,3;DOID:120,7.99e-08,27;DOID:193,4.03e-07,29 | |||
|ontology_enrichment_uberon=UBERON:0001981!9.07e-34!60;UBERON:0007500!9.07e-34!60;UBERON:0004537!9.07e-34!60;UBERON:0006965!9.07e-34!60;UBERON:0004872!1.62e-33!84;UBERON:0000055!4.70e-31!69;UBERON:0002049!5.99e-29!79;UBERON:0007798!5.99e-29!79;UBERON:0001637!1.85e-27!42;UBERON:0003509!1.85e-27!42;UBERON:0004572!1.85e-27!42;UBERON:0001009!6.29e-25!113;UBERON:0004535!1.44e-24!110;UBERON:0003914!1.30e-23!118;UBERON:0004573!3.15e-21!33;UBERON:0004571!3.15e-21!33;UBERON:0000490!1.27e-14!138;UBERON:0000947!4.80e-14!21;UBERON:0010191!4.80e-14!21;UBERON:0001986!1.03e-11!18;UBERON:0004638!1.03e-11!18;UBERON:0004852!1.03e-11!18;UBERON:0000487!1.27e-11!22;UBERON:0006914!2.24e-11!25;UBERON:0000025!6.31e-09!194;UBERON:0007100!1.31e-08!27;UBERON:0000948!2.04e-08!24;UBERON:0005498!2.04e-08!24;UBERON:0004140!2.04e-08!24;UBERON:0009881!2.04e-08!24;UBERON:0004141!2.04e-08!24;UBERON:0003084!2.04e-08!24;UBERON:0007005!2.04e-08!24;UBERON:0004139!2.04e-08!24;UBERON:0004291!2.04e-08!24;UBERON:0004111!2.07e-08!241;UBERON:0001134!5.71e-08!61;UBERON:0002036!5.71e-08!61;UBERON:0003082!5.71e-08!61;UBERON:0002385!6.49e-08!63;UBERON:0001015!6.49e-08!63;UBERON:0000383!6.49e-08!63;UBERON:0003915!7.03e-08!9;UBERON:0004700!7.03e-08!9;UBERON:0001917!7.03e-08!9;UBERON:0000477!1.72e-07!286;UBERON:0003513!7.51e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.77e-21;42!UBERON:0003509;1.77e-21;42!UBERON:0004572;1.77e-21;42!UBERON:0004573;1.62e-19;33!UBERON:0004571;1.62e-19;33!UBERON:0007500;3.86e-16;56!UBERON:0001981;3.86e-16;56!UBERON:0004537;3.86e-16;56!UBERON:0000947;8.27e-13;21!UBERON:0010191;8.27e-13;21!UBERON:0000055;1.05e-09;65!UBERON:0003914;2.44e-08;74!UBERON:0003915;4.13e-08;9!UBERON:0004700;4.13e-08;9!UBERON:0001917;4.13e-08;9!UBERON:0000487;4.45e-08;22!UBERON:0003498;5.28e-08;3!UBERON:0005985;5.28e-08;3!UBERON:0001621;5.28e-08;3!UBERON:0002118;9.28e-08;5!UBERON:0000992;1.86e-07;13!UBERON:0002049;1.93e-07;75!UBERON:0007798;1.93e-07;75!UBERON:0000025;6.98e-07;93!UBERON:0006914;7.26e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,1.30e-29,42;UBERON:0003509,1.30e-29,42;UBERON:0004572,1.30e-29,42;UBERON:0007500,3.59e-28,59;UBERON:0001981,3.59e-28,59;UBERON:0004537,3.59e-28,59;UBERON:0006965,3.59e-28,59;UBERON:0004872,2.15e-25,83;UBERON:0000055,3.05e-23,68;UBERON:0004573,9.61e-23,33;UBERON:0004571,9.61e-23,33;UBERON:0002049,3.99e-19,78;UBERON:0007798,3.99e-19,78;UBERON:0003914,1.97e-18,117;UBERON:0004535,1.26e-15,109;UBERON:0001009,5.92e-15,112;UBERON:0000947,4.76e-13,21;UBERON:0010191,4.76e-13,21;UBERON:0003498,2.18e-11,5;UBERON:0005985,2.18e-11,5;UBERON:0000490,2.29e-08,148;UBERON:0000487,2.45e-08,22;UBERON:0003915,2.69e-08,9;UBERON:0004700,2.69e-08,9;UBERON:0001917,2.69e-08,9;UBERON:0000025,5.75e-08,192;UBERON:0001621,5.99e-08,3;UBERON:0002118,6.32e-08,5;UBERON:0000926,9.26e-08,315;UBERON:0004120,9.26e-08,315;UBERON:0006603,9.26e-08,315;UBERON:0000992,1.76e-07,13;UBERON:0003081,1.81e-07,203;UBERON:0001134,2.99e-07,62;UBERON:0002036,2.99e-07,62;UBERON:0003082,2.99e-07,62;UBERON:0006914,4.35e-07,25;UBERON:0002385,6.81e-07,64;UBERON:0001015,6.81e-07,64;UBERON:0000383,6.81e-07,64 | |||
|phase1_expression=1.09007027562334,0.642301571672949,0.704772020479856,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0,4.66894479352867,1.39560233594486,0,0.263766978228454,0,0,0.672325146451775,1.80808358407193,0.730310090387373,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0.290209238628584,0,0.622822248995575,0,0,0,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15076305659177,0.361439152384566,0.50133791063589,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.196468613246569,0,0,0,0,0,0,0,0,1.78886166630035,0.860234595106124,2.08284300964557,2.82653970962005,1.25849830862972,0.550236083880135,1.25396979922086,0.775250277507987,0.35576626268671,0,0.402829317109147,0.760272105718513,0.732186172644509,0.735326160691737,1.62028389576352,0.267899184852239,0.22452937262617,0.112611480483322,1.53316637465883,1.89853131913626,0.366403487860815,1.31780417436063,0,0,0.993943903390637,4.55869841992487,2.1185468930115,0.573673241497627,1.06400514659507,3.36406560085384,3.20246987189115,2.22000793575444,0.622422070799533,0.404132016209064,0.980771418680752,0,0,0,0,0.570471821544449,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,1.70148274740032,0,0.213557388818567,0.423863802319124,0,0.309157587715317,0.257640540045629,0.37223371266318,1.0126579934476,1.16924406193438,0.504867548488229,0.0920498986422993,0.161646056818812,0.710019185033229,0.604512589365842,0.67824236924195,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.220587945464788,0.217879444092406,0.71181185733329,0.134831308160164,0.196221465125346,0,1.4763109092493,2.80483547606892,0.8231480226628,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0.109750285408626,0,0.301586917234893,0.185176890317059,0,0,2.88662684050547,0,0.469634776943287,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.839910640994298,0.283550194484773,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.129271715757778,0,0,1.06375246633948,1.04007436911366,0,0,0,0.285955987316295,0,0,0.325736184293735,0,0,17.7849232465156,6.97226766880235,16.0956515803112,1.2162378064119,0,0,1.4377491329495,0,0,0.289562613335158,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,1.03985430765404,1.07057393278297,0.630809660135739,1.05427273493442,0.300946099727719,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,1.73675465473144,1.38115775959256,0.280660094433074,0.128139149255701,1.02341449813341,1.44768529029247,4.45254199334973,0.308419387605311,0.177561725313127,0.410635780069046,1.03850885836724,0.348631135379878,0,0.40101294060657,0.276242966807689,0.803701137152247,0,0.393373244878272,0,0.15403067420883,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,4.82051789532479,0,0.154048617114644,0,0.413509717453592,0,0,0,0.0890320356467374,0.991709492165869,0.192190067365106,0.510450849978337,0.4046311234222,2.78907329578371,1.5740617341532,0.6970372701606,2.7723022215848,3.19383618190213,0,2.59453906745488,3.57812216854978,0,0,0.953150969619124,0,0,1.27281299170375,0,0,0.823611089208164,0,3.841467149893,3.17020642346017,2.10629228119491,0,0.731140468893853,3.16950440270266,0,0,1.13008116620243,1.65409603063837,0.66343897524122,0.438450885253763,0,0,3.65238678532867,0.6196469961995,0.563391205064483,1.00387946542836,0.88424136911809,2.49669736036875,0,0.211107635297664,0.329294892959902,0,0,0.0962221127255121,0.670302275535787,0,0,0.86101074534246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18375320854817,0,0.30607276163049,0.126373159256976,0,0,0,0.330991955875499,0,0,0,0.138674673013139,0,0.293977192243133,0.34823682632161,0,0.687944129886466,0.19351266257817,0,0.0821154570532092,0,0,0,1.23337732182076,0,0,0,0.320635281006135,0,0,0,0,0,0.432164393964449,0.124252535565433,0.235694034616795,1.22313785466253,0.836822770498666,0,0.288950589901519,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0.399358000997982,0.429226048136571,0,0.134366944973453,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17199840701485,10.3706578944152,3.26587360109409,0,0.082092520749339,0.511164065356265,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0.124980407962107,0,0,0.705797459094515,0,0,1.19403842309499,0,0.554805861502613,0,0,0,0.228840068396924,0.3024618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| |||
|short_description=p4@MSN | |||
}} |
Revision as of 05:54, 23 January 2014
Short description: | p4@MSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MSN_5end |
Coexpression cluster: | NA |
Association with transcript: | 17bp_to_uc010nkp.1_5end |
EntrezGene: | MSN |
HGNC: | 7373 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.60e-26 | 19 |
mesodermal cell | 3.23e-25 | 121 |
lining cell | 1.62e-20 | 58 |
barrier cell | 1.62e-20 | 58 |
vascular associated smooth muscle cell | 2.26e-16 | 32 |
squamous epithelial cell | 8.19e-14 | 63 |
smooth muscle cell | 5.00e-11 | 43 |
smooth muscle myoblast | 5.00e-11 | 43 |
embryonic cell | 1.85e-09 | 250 |
muscle cell | 1.01e-08 | 55 |
endothelial cell of artery | 2.69e-08 | 9 |
muscle precursor cell | 4.81e-08 | 58 |
myoblast | 4.81e-08 | 58 |
multi-potent skeletal muscle stem cell | 4.81e-08 | 58 |
smooth muscle cell of the coronary artery | 5.99e-08 | 3 |
electrically responsive cell | 1.94e-07 | 61 |
electrically active cell | 1.94e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.92e-17 | 14 |
cell type benign neoplasm | 3.67e-08 | 3 |
leiomyoma | 3.67e-08 | 3 |
female reproductive organ cancer | 7.99e-08 | 27 |
reproductive organ cancer | 4.03e-07 | 29 |