FFCP PHASE1:Hg19::chrX:49644079..49644093,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389856 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=13486 | |||
|TSSclassifier=weak | |||
|UniProt=A6NNY8 | |||
|association_with_transcript=-376bp_to_ENST00000508866,NM_001145073,uc004dop.2_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_1_at_USP27X_5end | |||
|id=chrX:49644079..49644093,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.64e-23!42;CL:0000738!1.20e-21!140;CL:0000860!9.56e-21!45;CL:0000037!5.28e-20!172;CL:0000566!5.28e-20!172;CL:0002031!2.20e-19!124;CL:0002032!3.12e-19!165;CL:0000837!3.12e-19!165;CL:0000988!1.12e-18!182;CL:0000557!2.31e-18!71;CL:0000766!3.14e-18!76;CL:0000839!2.02e-17!70;CL:0000763!7.43e-17!112;CL:0000049!7.43e-17!112;CL:0002009!5.37e-16!65;CL:0002087!1.07e-15!119;CL:0002194!8.77e-15!63;CL:0000576!8.77e-15!63;CL:0000040!8.77e-15!63;CL:0000559!8.77e-15!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.74e-30;33!CL:0002057;1.74e-30;33!CL:0000473;1.21e-24;39!CL:0000234;1.21e-24;39!CL:0000576;1.07e-18;48!CL:0000766;1.39e-15;69!CL:0000763;5.09e-09;100!CL:0002087;2.77e-07;104!CL:0000738;2.82e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.66e-36,42;CL:0002057,8.66e-36,42;CL:0000473,2.55e-35,48;CL:0000234,2.55e-35,48;CL:0000557,9.48e-32,67;CL:0000766,3.86e-31,72;CL:0000839,4.33e-30,66;CL:0000738,1.78e-29,136;CL:0000763,2.24e-28,108;CL:0000049,2.24e-28,108;CL:0000037,2.18e-27,168;CL:0002009,3.18e-27,61;CL:0002031,4.99e-27,120;CL:0002032,1.00e-26,161;CL:0000837,1.00e-26,161;CL:0002194,4.17e-25,59;CL:0000576,4.17e-25,59;CL:0000040,4.17e-25,59;CL:0000559,4.17e-25,59;CL:0000988,1.29e-24,177;CL:0002087,1.16e-19,115;CL:0000134,1.51e-09,354;CL:0002320,7.48e-09,361;CL:0000034,1.66e-08,441;CL:0000219,4.00e-08,386;CL:0000048,4.78e-08,427;CL:0000723,1.51e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.63e-26;42!CL:0000049;1.21e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.11e-16!80;UBERON:0001474!3.19e-15!86;UBERON:0002390!3.98e-13!102;UBERON:0003061!3.98e-13!102;UBERON:0004765!8.32e-13!101;UBERON:0001434!8.32e-13!101;UBERON:0002193!1.16e-11!112;UBERON:0002405!1.36e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.54e-07;9!UBERON:0001557;3.54e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.33e-28,76;UBERON:0001474,3.36e-25,82;UBERON:0004765,1.95e-24,90;UBERON:0002405,2.07e-23,93;UBERON:0001434,3.50e-20,100;UBERON:0002390,2.05e-19,98;UBERON:0003061,2.05e-19,98;UBERON:0002193,1.12e-17,108;UBERON:0002204,1.37e-09,167;UBERON:0002384,3.10e-08,371;UBERON:0001737,3.38e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0.672325146451775,2.41077811209591,3.65155045193687,4.39139518911456,0.123121058076788,0.204000691244253,0.313454721478088,0,0.136874425072884,0,0,0.0821005894499457,0,17.3080281813518,4.22212337906934,56.972333380316,0,0,0.369754010166788,0,0,17.322425920756,0,0.401088894940283,0.868043482863407,0.223915474239924,0.32389366601898,0,9.30548728189214,12.4699061417307,16.4957161607715,9.76201955003875,13.1573724166984,16.1047312865454,11.507695692886,11.0149103807513,13.7159693335379,14.1345729102014,15.4916324060118,24.3767675869815,11.6710250516415,11.4620583024295,10.7867272533641,10.1007684482398,12.1953030288916,15.983428144976,7.58657990429447,12.9651377454061,12.7867425159808,7.2552309657146,7.37600792098482,9.34233373493363,8.54245461872927,16.6874533894464,14.3344637505377,4.23779651843358,9.57521853567668,14.5572698222807,10.1402537429732,18.4965740969588,16.7726916406701,10.1095768031846,13.2155665700526,7.55410257476277,9.69043328720245,17.1068342391217,12.969154917289,1.75996244461323,1.63841583378639,4.44754626931777,3.41384178053206,5.20514783146816,1.14950487990897,5.2883589822789,0,1.1384259382189,0,0.764546456250458,15.8605594294831,21.2993253932984,11.5888997301034,0.983548850569165,0.393010762749165,1.02800749499755,10.8671222003941,26.3997035973208,22.2520468695325,37.0170783975031,9.24706792146941,36.8257384343546,37.8822959737992,26.8095825127365,8.45402710189456,8.06367954871245,7.5641436117691,4.14525026678773,6.37566788617116,28.7675932534397,32.3724401988553,28.2245914273437,8.83812873041016,18.3945836928922,20.2740192834752,27.8321661221453,1.59282707162048,1.95325036156926,0.950452044448374,5.42070428679982,5.11946444617674,0,1.18388626022008,0,1.20964045934839,0.534880391567015,0.289648807765598,0,0,6.26526553033299,0,0,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0,0.364295288292542,0,0,0,0,0.476981248610684,3.43196946468077,10.4008100372278,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0.24406205754817,0,0,0.0892997282840798,0.22452937262617,0.225222960966644,0,0,0,11.8602375692457,23.2668158488995,0,0.496971951695318,0,1.45650098894541,0,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0.298897361103602,0.117434498643765,0,0,0,0.245668634623536,0.309977343527296,0,0.494533858557114,0,0.718618141816238,0,0,0,0,0.30648779579902,0.150238058906597,0.340296549480063,0,0.213557388818567,0,0,0,0,0.18611685633159,1.0126579934476,0.0974370051611986,0,0.0920498986422993,11.4768700341356,0.355009592516614,0,0,0.193260853163297,0,0.286804595389004,0,0,0,0.207322110030741,4.03713361401005,2.55484151353081,0,0.643240938192885,0,0,0,5.08719240171329,6.74338760312407,6.26628677697053,4.52205288202815,4.79334777003293,4.98268300133303,4.44943316928543,4.12065076763227,3.46272441251751,0,0,0.8231480226628,0,0,0,0.590789906681404,0,0.122988438543114,5.49016992955282,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,6.26024186865415,5.4007999348478,0.144366447761074,6.94478268864916,2.85381228351897,0,0,0.246217006087397,0.234004265139238,0.148631162288728,2.81201501960331,5.37542810236351,4.67857820899875,0,0,0,0,9.42118243941519,108.847260658905,74.9423757768199,90.0108550330089,4.00036734040665,0.381988425558278,0,0,0.102827492703324,4.20480280981484,8.00314011365619,0.112131084345361,0.43596006883328,0,0,0,1.690605505112,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,12.162378064119,9.04062764577828,12.6500363689819,0,0,8.5582143024431,0,0,0,0.224170287987055,1.37921532141349,0.646882724578552,0.513372145118994,0,0,0,0.167516265334349,5.10351001322531,0.749007023947182,0,0,0,0,0,6.86303843051664,8.92144943985809,7.41201350659493,4.80279801470124,0.300946099727719,0,1.03473071292505,0.664225598535437,0.368738337083406,0.0868836144680828,0.195801157462741,0.686286847621712,0.82707210449155,0,0.213455115606889,0,0,0,0.248107807818777,1.53461973288062,0,0.128139149255701,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.241718899183244,0,0,0,0.364182336013434,0,0,0,0,0,0.105551628892876,0,0,0,1.54227252690289,0,0.501689773854853,0,0.831076008928724,0,6.13927654608617,10.1959825899711,0,0,0,0.206082023295445,0,0,0,0.650060246036521,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.356128142586949,0,0.192190067365106,4.8492830747942,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0.274537029736055,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,12.462000288886,0,0,0,5.44963138375396,6.9756819119316,0,0,0,0,0,0.349934720244983,0,0.670302275535787,1.08890984861323,0,0.43050537267123,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0,0,0.213648142254946,1.92495971052672,0.245040215981032,0.185803175125719,0.432807638929335,0.0711418433484141,0,0.199579371432817,5.93666647410337,0,6.16781686521655,0,0.228234679033192,0,20.0507581672054,4.9094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| |||
|short_description=p1@USP27X | |||
}} |
Revision as of 05:41, 23 January 2014
Short description: | p1@USP27X |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_USP27X_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -376bp_to_ENST00000508866, NM_001145073, uc004dop.2_5end |
EntrezGene: | USP27X |
HGNC: | 13486 |
UniProt: | A6NNY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.66e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.66e-36 | 42 |
defensive cell | 2.55e-35 | 48 |
phagocyte | 2.55e-35 | 48 |
granulocyte monocyte progenitor cell | 9.48e-32 | 67 |
myeloid leukocyte | 3.86e-31 | 72 |
myeloid lineage restricted progenitor cell | 4.33e-30 | 66 |
leukocyte | 1.78e-29 | 136 |
myeloid cell | 2.24e-28 | 108 |
common myeloid progenitor | 2.24e-28 | 108 |
hematopoietic stem cell | 2.18e-27 | 168 |
macrophage dendritic cell progenitor | 3.18e-27 | 61 |
hematopoietic lineage restricted progenitor cell | 4.99e-27 | 120 |
hematopoietic oligopotent progenitor cell | 1.00e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.00e-26 | 161 |
monopoietic cell | 4.17e-25 | 59 |
monocyte | 4.17e-25 | 59 |
monoblast | 4.17e-25 | 59 |
promonocyte | 4.17e-25 | 59 |
hematopoietic cell | 1.29e-24 | 177 |
nongranular leukocyte | 1.16e-19 | 115 |
mesenchymal cell | 1.51e-09 | 354 |
connective tissue cell | 7.48e-09 | 361 |
stem cell | 1.66e-08 | 441 |
motile cell | 4.00e-08 | 386 |
multi fate stem cell | 4.78e-08 | 427 |
somatic stem cell | 1.51e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.33e-28 | 76 |
bone element | 3.36e-25 | 82 |
skeletal element | 1.95e-24 | 90 |
immune system | 2.07e-23 | 93 |
skeletal system | 3.50e-20 | 100 |
hematopoietic system | 2.05e-19 | 98 |
blood island | 2.05e-19 | 98 |
hemolymphoid system | 1.12e-17 | 108 |
musculoskeletal system | 1.37e-09 | 167 |
connective tissue | 3.10e-08 | 371 |
larynx | 3.38e-07 | 9 |