FFCP PHASE1:Hg19::chrX:45605271..45605287,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1554 | |||
|description=CAGE_peak_at_chrX:45605271..45605287,- | |||
|id=chrX:45605271..45605287,- | |||
|ontology_enrichment_celltype=CL:0002057!1.37e-11!42;CL:0000860!8.75e-11!45;CL:0000057!2.68e-08!75;CL:0002620!3.60e-08!23;CL:0000134!3.24e-07!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.95e-37;33!CL:0002057;1.95e-37;33!CL:0000473;8.31e-30;39!CL:0000234;8.31e-30;39!CL:0000576;8.59e-17;48!CL:0000766;6.30e-11;69!CL:0002620;5.45e-08;23!CL:0000214;1.23e-07;3!CL:0002087;6.61e-07;104!CL:0000763;9.07e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.65e-32,42;CL:0002057,3.65e-32,42;CL:0000473,2.44e-31,48;CL:0000234,2.44e-31,48;CL:0002194,2.94e-24,59;CL:0000576,2.94e-24,59;CL:0000040,2.94e-24,59;CL:0000559,2.94e-24,59;CL:0002009,2.41e-23,61;CL:0000839,2.67e-21,66;CL:0000557,6.30e-21,67;CL:0000766,3.23e-19,72;CL:0002087,4.87e-12,115;CL:0000763,1.48e-11,108;CL:0000049,1.48e-11,108;CL:0002031,2.27e-11,120;CL:0000738,1.46e-09,136;CL:0000134,1.76e-08,354;CL:0002320,3.45e-08,361;CL:0002620,5.49e-08,23;CL:0000214,1.11e-07,3;CL:0002032,1.82e-07,161;CL:0000837,1.82e-07,161;CL:0000219,3.69e-07,386;CL:0000037,5.40e-07,168;CL:0000034,7.95e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;4.89e-22;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006915;1.23e-07;3!UBERON:0007616;1.23e-07;3!UBERON:0002217;1.23e-07;3!UBERON:0002018;1.23e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.22e-18,76;UBERON:0001474,2.04e-16,82;UBERON:0001434,3.60e-16,100;UBERON:0004765,1.27e-14,90;UBERON:0002405,4.99e-14,93;UBERON:0002390,4.04e-13,98;UBERON:0003061,4.04e-13,98;UBERON:0002193,1.48e-11,108;UBERON:0002204,2.81e-11,167;UBERON:0002384,1.48e-08,371;UBERON:0006915,1.11e-07,3;UBERON:0007616,1.11e-07,3;UBERON:0002217,1.11e-07,3;UBERON:0002018,1.11e-07,3;UBERON:0003081,1.75e-07,203 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.410623275218653,0,0,0.0821005894499457,0.157421562627358,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.802177789880567,0,0,0,0,0,0,0.242584061187816,0.929716147622738,0.411167888021826,1.23882548358041,1.1507695692886,1.5369642391746,0.945928919554341,2.41321976515633,3.22742341791913,1.35426486594342,0.941211697713023,0.272906150057846,0.674170453335254,4.28517449319264,3.53021929783703,5.75403413219137,0,0,0,1.45104619314292,2.8369261234557,1.24564449799115,2.00998932205395,3.12889751052121,0.434377689410233,1.21079900526674,1.84138817993782,2.84816148696796,0,0.212604299965044,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0.361439152384566,0,0.724232594804119,0,0,0.378139268656271,0.221729397462564,0.43917392846563,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0.926864265692532,1.14734648299525,0,0,0,0,0,0,0,0,0,0,0,0,0.896692083310806,0.117434498643765,0,0.140450806702248,0,0.368502951935304,0,0,0.989067717114227,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0.612975591598039,0.300476117813194,0,8.43131287737651,0.640672166455702,0.211931901159562,2.70081986475962,0.206105058476878,3.60696756063881,0.18611685633159,2.19409231913646,0.194874010322397,5.3011092591264,0.368199594569197,0,3.19508633264953,0.302256294682921,0.169560592310488,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0.93733833986777,0.16798212819886,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.258543431515556,0,0.845302752556,0.26593811658487,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,4.21667878966063,0,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0.112085143993527,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.623912584592421,0.356857977594324,0.157702415033935,0.117141414992713,0,0,0,0.664225598535437,0,0.347534457872331,0,0,0,0,0,0,0,0,0.992431231275107,0.61384789315225,0,0.256278298511402,0,0,0,0.462629081407967,0.710246901252508,0.410635780069046,0.519254429183621,0.464841513839837,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0.154048617114644,0.307007349452259,0.413509717453592,0.107420244868274,0,0.0852266274161009,0,0,0,0.638063562472921,0.10115778085555,0,1.5740617341532,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0.578775534266688,0,0,0,0.281695602532241,0,0,0,0,1.05553817648832,1.97576935775941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0.144269212976445,0,0,0.199579371432817,0,0.635020748171649,0.324621940274555,0.280797178113459,0.456469358066384,0.156679895773023,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0.687010689511529,0,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0.23056390438806,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0.611030144933625,0,0.247127877893006,0.104421949505455,0,1.60515529459758,0,0,0,0.485560759068186,0,0,0,0,0,0.311064574191741,0.664653872707185,0,0.313932918407225,0,0,0.554698692052555,0,0.0979923974143777,0.0870592065804026,0.17472666824203,1.54787429224455,0,0.0730893170861856,0,0,0,0,0.137041924646751,0.596143835108969,0.0633107959558787,0,0.0801588202515337,0,0.19980960958213,0.144090417154106,0,0,0.576219191952599,0.372757606696298,0.235694034616795,0.135904206073614,0.104602846312333,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0.795229689809303,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0.864221491201268,0.653174720218818,0,0.164185041498678,1.02232813071253,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0.365377795142688,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0.138348634936231,0.249960815924213,0,0.285465333544967,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0.378806010550178,0.754703705257725,0,0,0.604923695052956,0.15543720058278,0,0,0,0,0,0.53168342911599,1.04349012362347,0.150257608997218,0.380805212168795,0.406870733204662,0.181848659202559,0,0.464033759878494,0.796191777397232,1.20008329398946,0.343395705182793,0,0,0.192619830407303,0,0,0.453411851024545,0.463044948647668,0.244736704506468,0.358177682162975,0,0,0.353378291891762,0.192914038270915,0.337884881306145,0.512483037175893,0,0.3038599561773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| |||
|short_description=p@chrX:45605271..45605287,- | |||
}} |
Revision as of 05:25, 23 January 2014
Short description: | p@chrX:45605271..45605287, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:45605271..45605287, - |
Coexpression cluster: | C1554_Fibroblast_CD14_Mast_tenocyte_Small_oral_Synoviocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.65e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.65e-32 | 42 |
defensive cell | 2.44e-31 | 48 |
phagocyte | 2.44e-31 | 48 |
monopoietic cell | 2.94e-24 | 59 |
monocyte | 2.94e-24 | 59 |
monoblast | 2.94e-24 | 59 |
promonocyte | 2.94e-24 | 59 |
macrophage dendritic cell progenitor | 2.41e-23 | 61 |
myeloid lineage restricted progenitor cell | 2.67e-21 | 66 |
granulocyte monocyte progenitor cell | 6.30e-21 | 67 |
myeloid leukocyte | 3.23e-19 | 72 |
nongranular leukocyte | 4.87e-12 | 115 |
myeloid cell | 1.48e-11 | 108 |
common myeloid progenitor | 1.48e-11 | 108 |
hematopoietic lineage restricted progenitor cell | 2.27e-11 | 120 |
leukocyte | 1.46e-09 | 136 |
mesenchymal cell | 1.76e-08 | 354 |
connective tissue cell | 3.45e-08 | 361 |
skin fibroblast | 5.49e-08 | 23 |
synovial cell | 1.11e-07 | 3 |
hematopoietic oligopotent progenitor cell | 1.82e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.82e-07 | 161 |
motile cell | 3.69e-07 | 386 |
hematopoietic stem cell | 5.40e-07 | 168 |
stem cell | 7.95e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.22e-18 | 76 |
bone element | 2.04e-16 | 82 |
skeletal system | 3.60e-16 | 100 |
skeletal element | 1.27e-14 | 90 |
immune system | 4.99e-14 | 93 |
hematopoietic system | 4.04e-13 | 98 |
blood island | 4.04e-13 | 98 |
hemolymphoid system | 1.48e-11 | 108 |
musculoskeletal system | 2.81e-11 | 167 |
connective tissue | 1.48e-08 | 371 |
stratified squamous epithelium | 1.11e-07 | 3 |
layer of synovial tissue | 1.11e-07 | 3 |
synovial joint | 1.11e-07 | 3 |
synovial membrane of synovial joint | 1.11e-07 | 3 |
lateral plate mesoderm | 1.75e-07 | 203 |