FFCP PHASE1:Hg19::chrX:20384486..20384492,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=weak | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chrX:20384486..20384492,- | |||
|id=chrX:20384486..20384492,- | |||
|ontology_enrichment_celltype=CL:0002150!8.06e-13!3;CL:0000861!8.06e-13!3;CL:0000785!7.37e-10!2;CL:0000955!7.37e-10!2;CL:0000818!7.37e-10!2;CL:0000954!7.37e-10!2;CL:0000816!7.37e-10!2;CL:0000817!7.90e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000322;8.00e-18;3!CL:0002178;1.03e-17;3!CL:0002202;7.91e-07;9!CL:0002632;7.91e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,8.00e-18,3;CL:0002178,1.12e-17,3;CL:0002202,7.91e-07,9;CL:0002632,7.91e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!1.62e-18!8;DOID:162!1.61e-10!235;DOID:14566!3.74e-10!239;DOID:305!1.45e-09!106;DOID:0050687!9.36e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3910;5.56e-26;2!DOID:3908;2.94e-11;5!DOID:1325;2.03e-08;7!DOID:3904;2.03e-08;7!DOID:3905;7.91e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,5.56e-26,2;DOID:3908,2.94e-11,5;DOID:1325,2.03e-08,7;DOID:3904,2.03e-08,7;DOID:3905,7.91e-07,9 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;5.56e-26;2!UBERON:0002173;5.56e-26;2!UBERON:0002186;5.56e-26;2!UBERON:0004821;8.00e-18;3!UBERON:0007499;8.00e-18;3!UBERON:0003215;8.00e-18;3!UBERON:0010368;8.00e-18;3!UBERON:0009911;8.00e-18;3!UBERON:0002299;8.00e-18;3!UBERON:0006524;8.00e-18;3!UBERON:0008874;8.00e-18;3!UBERON:0002169;8.00e-18;3!UBERON:0004894;8.00e-18;3!UBERON:0009856;1.00e-13;4!UBERON:0000945;3.42e-11;5!UBERON:0010039;3.42e-11;5!UBERON:0000473;1.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,5.56e-26,2;UBERON:0002173,5.56e-26,2;UBERON:0002186,5.56e-26,2;UBERON:0004821,8.00e-18,3;UBERON:0003215,8.00e-18,3;UBERON:0010368,8.00e-18,3;UBERON:0009911,8.00e-18,3;UBERON:0002299,8.00e-18,3;UBERON:0006524,8.00e-18,3;UBERON:0008874,8.00e-18,3;UBERON:0002169,8.00e-18,3;UBERON:0004894,8.00e-18,3;UBERON:0000473,1.69e-07,8;UBERON:0000945,1.80e-07,8;UBERON:0010039,1.80e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.503464760927528,0.189753732724185,0.635746315921515,0,0,0.141353071433941,0,0,0,0,0.296521128680622,0,0,0,0,0,0.364909578431332,0,0,0,0,0,0,18.0388103297391,0.518440956986236,0,0,0,0,0,0,0,0.195984794828755,0.34823682632161,0,0.171986032471617,0.0967563312890851,0.146178634172371,0.246346371159628,0,0,0,0,0,0,0.195551382734803,0,0,0,1.00863292007874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.345701962667338,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0.227336094654718,1.87574891109325,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:20384486..20384492,- | |||
}} |
Revision as of 05:03, 23 January 2014
Short description: | p@chrX:20384486..20384492, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:20384486..20384492, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 8.00e-18 | 3 |
epithelial cell of stomach | 1.12e-17 | 3 |
epithelial cell of tracheobronchial tree | 7.91e-07 | 9 |
epithelial cell of lower respiratory tract | 7.91e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 5.56e-26 | 2 |
alveolar duct | 5.56e-26 | 2 |
bronchiole | 5.56e-26 | 2 |
pulmonary alveolus epithelium | 8.00e-18 | 3 |
alveolus | 8.00e-18 | 3 |
pulmonary lobule | 8.00e-18 | 3 |
lobule | 8.00e-18 | 3 |
alveolus of lung | 8.00e-18 | 3 |
alveolar system | 8.00e-18 | 3 |
pulmonary acinus | 8.00e-18 | 3 |
alveolar sac | 8.00e-18 | 3 |
alveolar wall | 8.00e-18 | 3 |
testis | 1.69e-07 | 8 |
stomach | 1.80e-07 | 8 |
food storage organ | 1.80e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 5.56e-26 | 2 |
non-small cell lung carcinoma | 2.94e-11 | 5 |
bronchus cancer | 2.03e-08 | 7 |
bronchogenic carcinoma | 2.03e-08 | 7 |
lung carcinoma | 7.91e-07 | 9 |