FFCP PHASE1:Hg19::chrX:20285113..20285175,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6197 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10432 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=42bp_to_ENST00000492128_5end | |||
|description=CAGE_peak_2_at_RPS6KA3_5end | |||
|id=chrX:20285113..20285175,- | |||
|ontology_enrichment_celltype=CL:0000766!1.71e-15!76;CL:0000763!1.07e-13!112;CL:0000049!1.07e-13!112;CL:0000839!3.52e-13!70;CL:0000557!7.53e-13!71;CL:0002194!3.68e-11!63;CL:0000576!3.68e-11!63;CL:0000040!3.68e-11!63;CL:0000559!3.68e-11!63;CL:0000860!7.27e-11!45;CL:0002009!1.22e-10!65;CL:0002057!2.78e-10!42;CL:0000037!2.15e-07!172;CL:0000566!2.15e-07!172;CL:0002032!4.43e-07!165;CL:0000837!4.43e-07!165;CL:0000738!5.88e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.90e-08;33!CL:0002057;4.90e-08;33!CL:0000473;1.69e-07;39!CL:0000234;1.69e-07;39!CL:0000576;4.13e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.46e-14,72;CL:0000763,8.11e-13,108;CL:0000049,8.11e-13,108;CL:0000839,2.84e-12,66;CL:0000557,6.00e-12,67;CL:0000473,9.91e-11,48;CL:0000234,9.91e-11,48;CL:0000860,2.78e-10,42;CL:0002057,2.78e-10,42;CL:0002194,2.81e-10,59;CL:0000576,2.81e-10,59;CL:0000040,2.81e-10,59;CL:0000559,2.81e-10,59;CL:0002009,9.06e-10,61;CL:0000037,9.22e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.36e-29!115;UBERON:0002390!2.54e-14!102;UBERON:0003061!2.54e-14!102;UBERON:0002371!1.31e-11!80;UBERON:0002193!2.33e-11!112;UBERON:0001474!3.57e-11!86;UBERON:0004765!7.76e-11!101;UBERON:0001434!7.76e-11!101;UBERON:0000062!2.19e-09!511;UBERON:0002405!2.82e-09!115;UBERON:0001049!2.75e-07!57;UBERON:0005068!2.75e-07!57;UBERON:0006241!2.75e-07!57;UBERON:0007135!2.75e-07!57;UBERON:0002780!4.26e-07!41;UBERON:0001890!4.26e-07!41;UBERON:0006240!4.26e-07!41;UBERON:0003080!9.86e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;4.88e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.77e-29,114;UBERON:0002390,2.01e-13,98;UBERON:0003061,2.01e-13,98;UBERON:0002371,9.70e-11,76;UBERON:0002193,1.55e-10,108;UBERON:0001474,2.54e-10,82;UBERON:0001434,6.26e-10,100;UBERON:0004765,1.99e-09,90;UBERON:0002405,9.12e-08,93;UBERON:0001049,1.32e-07,56;UBERON:0005068,1.32e-07,56;UBERON:0006241,1.32e-07,56;UBERON:0007135,1.32e-07,56;UBERON:0000073,2.49e-07,53;UBERON:0002616,2.49e-07,53;UBERON:0002780,4.26e-07,41;UBERON:0001890,4.26e-07,41;UBERON:0003080,4.26e-07,41;UBERON:0006240,4.26e-07,41 | |||
|phase1_expression=2.90685406832891,3.63970890614671,2.39622486963151,3.00219895059391,7.15137751083661,0.872338524100369,0,7.58063848112197,4.44015567939725,4.42321085702716,1.39560233594486,3.49506195408276,2.11013582582763,5.44571953024205,8.28493439319789,4.70627602516243,8.43772339233568,2.19093027116212,5.36726078669558,3.0780264519197,3.4680117511523,2.5076377718247,2.0036519099174,2.87436292653057,2.25976751270645,4.12632391038937,3.11982239909794,5.35233312933019,6.68719270643137,6.1412703695554,6.34746105595912,4.59710612239464,2.71085326900425,2.58827807116751,1.23947520928483,1.42169232487422,6.45920966536664,14.9578760303607,16.0435557976113,11.5015761479401,9.40444991807682,7.77344798445551,10.3030227053675,7.56070841653736,7.17964293008738,6.54976965207104,8.59987436551033,12.3350366406548,8.6717783850629,14.0969272237854,8.96562472851852,8.27687804610048,11.721353145045,7.74581620300591,9.47985406160392,5.45902784673554,6.27684145133045,6.51698104890745,14.0798590490615,12.1953030288916,10.8687311385837,12.5343494070952,7.57961898962201,8.52449501065388,22.9265298516581,27.2344907851747,15.5705562248894,16.3311632416883,13.037072960505,8.90474263290978,14.5295880632009,18.4138817993782,9.17740923578565,7.81644559354185,6.80333759888139,6.49941801075965,6.62738923764321,10.3622056060639,16.2332842564051,9.4054205434612,8.75233379675996,6.02791707423292,3.51992488922645,8.19207916893197,11.5636203002262,11.9484462318622,6.4063357925762,4.59801951963587,9.25462821898807,11.4486450544244,7.39976859842283,2.93618594685469,7.64546456250458,0,5.60508562981536,3.16060901730092,7.67168103443949,5.50215067848831,5.14003747498773,4.01247588937627,3.91106719960308,5.20792586308207,1.94826728407911,3.89936599098108,3.24066498222321,4.43067789167242,4.60366568400527,3.71464827204458,3.77172107923647,5.91976456573234,6.63240042686036,4.63684937176084,4.30031033169975,3.47803076516627,1.04535523804977,4.30575502250752,2.68254345521345,4.46715679127419,4.80737414837055,8.28270077242652,7.1619179924206,7.60361635558699,10.2391080972885,10.1109422811991,9.99445812418767,8.99753557767264,9.03240796613151,6.45141578319144,5.88368430723716,5.79297615531196,36.5710299470943,6.70700859703636,9.58969213826478,6.14446559053763,5.51471701699479,8.11140506180613,5.5670016293577,4.37971383272372,6.05022829850034,8.20398770611487,6.58760892698445,6.28699562389021,2.91436230634034,2.22470665670658,5.8418530857843,8.70648686496336,7.57860374957531,9.77811559651902,5.14795419702115,8.91498003190956,1.78886166630035,0.860234595106124,2.08284300964557,1.13061588384802,3.77549492588915,2.20094433552054,3.13492449805216,4.39308490587859,5.33649394030065,2.34304428935269,3.62546385398232,3.04108842287405,1.46437234528902,6.25027236587977,2.43042584364528,3.66128885964727,5.61323431565425,5.29273958271614,0,4.74632829784064,2.01521918323448,19.7670626154095,19.3890132074163,2.18047026071267,4.96971951695318,5.82500353657067,8.34177839123278,9.46560848471085,6.02936249737207,7.8494864019923,4.2699598291882,6.166688710429,11.8260193451911,8.48677234039035,6.21155231831143,4.38936540170301,6.33793516927999,1.64025002283658,9.05264222807929,3.4228309292667,6.87463930538285,5.16711794032565,4.37056949793955,4.21352420106745,6.1246251376468,2.82518929817066,6.92282733877629,10.6920257155385,8.15980866619238,5.46096817162816,1.43723628363248,5.38675564653012,5.63033339423839,5.26421819419948,7.02364193409341,5.82326812018137,9.4649977111156,4.42385514324082,6.45802688479903,11.9592137738398,7.62954844174423,5.10154863343484,7.62588716364448,5.92573242104947,4.83903826462134,4.38818463827292,6.43084234063911,8.83518209854401,7.82424138459544,7.92065678412178,7.10019185033229,6.04512589365842,3.89989362314122,4.63826047591912,4.09119180886252,4.01526433544605,5.00092195131341,4.90360142789496,3.36962434321603,4.04278114559945,2.27088765788066,1.45990943630332,0,6.43240938192885,2.76269842704961,10.2160944167035,8.66255378003503,3.90412440131485,7.08055698328027,6.7483088367375,5.18381671842252,4.57546832594053,6.8808479542218,7.28089064064888,5.29797955838434,4.23221872641029,0.738155454624648,4.20725321410337,4.5273141246454,5.88034845542168,1.26755034821831,3.9313088667105,10.6342183202653,3.5317047953172,10.5770057147078,8.0636870840307,2.74375713521564,0,3.01586917234893,4.81459914824354,4.56131627434455,3.11980435583874,5.77325368101093,5.21686822387846,13.0323650601762,4.04226053731007,1.85194205030644,2.66355813128438,3.95102198979638,3.43394464837949,17.2351904261178,13.3382431129365,11.7418618208095,3.74935335947108,6.2153387433578,4.11147782002921,3.04498977189684,2.90633938513962,1.15014803749563,8.37527504423104,11.9745870257987,21.7694521317811,24.3562721274665,19.3150923142361,5.27032522625003,7.25778008560728,3.51652341630141,1.71072446022705,5.14137463516618,3.60411669412701,9.71809870943966,3.25180144601546,5.66748089483264,3.30022286194275,4.00742318849111,3.57656445851882,5.071816515336,5.31876233169741,3.12022310734098,2.82928111688356,7.09245660116391,1.0656887160644,9.15059159412144,3.7983512377401,2.46972101034231,4.56030658011229,9.24019066730619,4.75171123760058,13.2633325906218,4.35766729300147,12.9964888536674,2.43247561282381,8.03611346291402,6.32501818449095,6.46987109827273,5.7430967917057,19.9691667057006,5.93603357337075,5.34238438630997,6.08807275015645,5.04383147970873,8.86638420908672,6.03757209606648,6.16046574142792,3.81141936333695,6.50699269288109,2.31986643833309,5.02548796003046,2.55175500661265,41.9443933410422,44.8742188806037,68.7929752303819,8.58840442033979,3.00102312635806,9.22301080579101,7.27898015357825,6.24501460790066,5.04647728108591,5.50564650465752,6.3198680942821,6.82222512167955,2.0694614258501,5.97803038681893,4.24049087645917,6.51627108510621,2.15381273209015,2.74514739048685,9.30456117552993,8.84428223356329,10.4593006647375,3.94065842880137,3.32870879020994,5.44302527993425,4.21783273291921,4.14347327877769,3.36792113319688,5.50998341799514,3.07024349440022,3.37793234401576,1.48418066444991,5.70575867069826,4.79416658345443,6.81655394914616,7.2695620085707,5.694308544538,13.5362583542617,4.81215528727884,12.7992574620896,5.0518357192427,5.64482620820823,6.29397191805236,0.902399225814824,4.31285887784723,2.35304930753057,1.46139224653261,3.79985864014353,0,2.2112181685947,5.61381381865562,0,1.89662506280697,0,2.54876273045038,1.66215201785745,1.56712328305525,6.57779629937804,8.10449898177192,6.15480300279334,4.59220503979588,5.20605431462885,7.52199385028373,4.76161217055386,3.71292749642646,2.87132768998086,2.60024098414608,11.2478750890912,4.64019447802185,6.00789606747113,4.75861391651002,4.9621166094431,3.75970857038958,4.78555089916954,6.90335682070417,7.3896589586792,5.95025695299521,6.53446229041361,5.23212121227795,14.6678782240547,5.11330104227014,9.4443704049192,4.1822236209636,5.5446044431696,3.72614221221915,6.95946393660058,2.40921484835096,5.29562080945368,2.97726695487734,3.79655309662471,7.81583795087682,2.303080121802,14.9778645811872,5.40945521474092,4.70969184119538,6.83515338816596,7.13796277313742,4.71249609382746,4.65019707618627,3.17020642346017,6.7401352998237,0.48763373908959,7.06769119930725,3.16950440270266,7.6439950388472,4.3835683905651,3.39024349860728,3.85955740482287,6.6343897524122,3.06915619677634,5.78775534266688,14.4296845450259,3.65238678532867,3.0982349809975,1.40847801266121,6.74033355359042,7.36867807598409,4.63672366925625,4.61189383291777,9.49984358839489,9.87884678879706,1.13841952129715,4.89908608342976,4.42621718537356,1.34060455107157,1.08890984861323,7.06078505825844,2.58303223602738,3.36942951335251,2.21715076768338,3.67557440331135,18.7755615415903,26.7623022499831,16.5197684280507,17.1526878329608,18.0999400157925,22.6965658917451,19.4411317405721,19.0350042310625,2.45695363593188,7.69983884210687,2.20536194382929,1.11481905075431,2.59684583357601,0.853702120180969,0.956557636372934,5.18906365725323,3.4470966623826,8.46694330895532,4.22008522356922,3.08876895924805,4.79292825969704,4.7003968731907,7.51903431270201,4.23229444504008,5.78117070373318,8.87918711640609,7.66523227842587,5.15258017133647,7.37377834340299,5.36822658941798,7.00766395190016,7.62013572067957,12.8066839991811,20.9248578211111,4.32729085561573,7.32758329595204,26.7875309666914,10.1055891820439,8.05794985995417,12.3787732184504,2.45175445410452,8.23994825738598,8.83354593529453,4.15750553165694,11.9792673818701,11.9297717731956,13.0822557261777,5.23150913607658,7.25137046597742,4.85588438694385,12.5526232598174,12.1564922833705,7.55798243562828,8.99964406018962,4.18488338567636,4.0435146396035,4.58328590851367,10.2042069565097,9.71987503431056,20.2218981555714,16.7638164642858,8.89095921157095,5.81599647657131,7.14314355846255,1.99613798001194,8.07326059364223,2.44887999989348,4.34999745260876,4.32415103484899,17.5435018702009,2.6002644994473,2.41320361269025,5.24888304089858,2.2571249341328,8.85741385813839,16.5217120916809,18.30980835805,25.7649675639753,11.8219047581419,10.7498844605447,4.90223085835456,7.94715342388039,10.8499864490354,5.81104484819706,11.0670674106269,2.96200226552248,7.27937391877454,7.65602783356607,4.21348929648567,7.46248686426089,2.04386596391473,9.26183512730646,4.48771541130422,7.67025246098414,8.82281404429828,12.2509758492365,2.84630599086278,5.2449071063525,5.27495161320068,4.08082020397869,6.78494742882916,8.65554558968364,7.96209544862804,12.5609741594742,15.2757536233406,2.6686901581256,3.08909847366257,3.13265848516366,4.78548044162807,15.248975298677,8.66778449183755,0.729819156862664,9.00057247087613,7.52619176555688,12.2321164883311,9.67925728389311,4.59109142445735,9.16205404613075,3.45743864653333,3.42171031610916,3.98792323624311,1.98595173525299,5.33685961292283,10.7525186795663,5.69219092059585,2.63481878724963,3.64475450503775,8.52533857505085,5.04943398166335,8.91106008034354,2.75177651954586,9.7723894601976,7.89364624530804,9.68962393227869,9.89287968181878,5.29536760149002,9.7171718535629,3.70013196546227,3.37814839895082,13.2952671507345,5.08433595110488,5.45079977710429,10.6726497369676,5.39485945871752,18.2994829785715,4.81053703896846,6.86379991447858,7.63490429337193,4.47309128035557,6.59943296927027,7.47473133404877,5.54395085455366,4.28392514072551,5.49006120812886,4.20294202096853,11.7738625847114,10.2197270453578,7.73577794555923,5.25774708558629,11.4505784521624,12.6038233206426,23.6898098110349,5.39133301347276,9.87219910714113,14.5061447337217,9.40568614814168,10.4486966227297,18.6393519243926,43.0156175397441,46.3177124102155,40.846547575636,13.9767023750943,6.0118065766707,9.54275627771164,12.2583065500418,2.89355667237035,2.20063098555574,1.66176135211674,6.52424285499351,3.86900977278975,10.6919219718123,0,7.09251365692784,7.55346069143973,9.8208312963048,4.48218348332112,5.9493711169028,6.4322579373603,12.5797474369432,2.79695391420225,4.88699641578341,5.18532894720761,5.87857248196936,13.1703210718736,6.48530913919778,8.00823702391482,5.32566830144591,4.39656701034247,11.9256200020999,10.8597683343702,9.12404952024561,16.4243364368956,10.5722253347501,13.8823636338003,14.6200003742689,11.5986935497215,8.43482237080316,4.74267916555066,1.70509637733254,15.3201901864844,4.35214242695579,5.7658675625221,4.28883807468846,5.90170735277648,20.8881948012812,12.4049545195378,9.88412745705902,15.774057269019,5.73409195690071,10.4273308444641,6.95479712943495,10.5144962551535,8.24870692549904,9.70554352266546,4.28198000317451,4.23478475456709,2.81000943484129,5.79684114443301,5.07466329815372,3.97312626740282,5.54805861502613,7.76552321627865,9.30801236484528,8.89811221596536,6.40752191511386,7.10785341687223,2.64243240990727,4.13994419970975,5.57538685072958,5.84744045812686,6.36578123192664,5.39118070193112,5.58267600571789,4.69570555630561,5.86004675089152,10.2817407285575,5.2893195316606,4.36436782086143,5.80017008029438,4.17630383890644,5.17524655308201,2.00013882331577,1.37358282073117,3.03074539889327,13.8803388051516,23.3069994792837,9.64987161187166,3.91491437947817,4.98753036126999,8.56633154998186,1.95789363605174,5.37266523244462,4.32322026025361,5.04353314031026,10.2479704648611,4.62993691850196,3.88567613502067,4.86858885317099,3.10887307558079,6.07719912354764,16.452753902056,8.76871389777248,8.23762009942851,4.90696182767533,6.22458712808184,2.70350199629091,13.1013516482349,3.79976052124367,5.2278947550129,3.09986963389468,9.08025525706937,7.36423801007363,8.11301144772778,13.6856997207254,3.32525365389494,8.94945934592459,2.67352101155024,3.9315469749125,5.43144095852881,3.40119872162693,3.34626563499306,7.26238393365217,7.63210441568205,2.05040537003259,1.60114149657094,6.34816698643231,4.8999276376512,10.4051344656264,25.5053837386053,16.7615552010009,5.74325819874114,3.27693205088234,9.47454358759785,16.7934671457125,8.56616521554926,3.33702242903487,5.19066782730058,4.95257216008533,5.31418064291556,3.81382095467167,8.97467903878131,11.9349733269765,13.5378591028663,4.43751151147744,7.81514011233093,5.23813388962845,5.2407013603231,5.32281910381363,10.9410887081799,14.8404838736631,15.2948229410876,9.57578733927993,1.09394961803644,12.061670870858,12.9014906381217,4.22090986463089,5.4937843885026,20.8923715992532,15.1327674998471,10.3184152720227,10.700122993511,6.56397539203527,2.07421177600403,8.57440047187092,6.45712463279901,10.5894165436187,2.36387681767936,8.00866093622898,12.1664293918297,17.2827148907602,9.52925355266883,10.0447459256045,2.80705868584208,1.9110067515482,9.0060445662587,0.94808167039636,10.3454868577631,4.69417335216964,20.0427841182563,6.83813341738022,5.97514669828825,20.0465301926087,13.7672754822489,6.62659204091166,8.43612707115661,8.46774100381858,15.1210533239073,2.17144469965024,1.91107787795487,2.23710863595585,2.15930513953535,5.12055284925532,9.06400372063053,9.75296665134347,3.4794432940146,8.74279787506451,3.9769708788558,5.17272015419557,4.40004335877004,3.61427462524672,8.57536030614347,6.03851374266694,11.7304720324076,8.74238242015829,7.52507674178437,20.3473107055742,28.9882152935,9.81542335574726,7.42616000817715,6.7624916413344,6.11737612876141,8.64652045414653,9.15302009224796,4.4973520166218,4.6424024037471,9.17526666460799,4.01206833445841,10.9550458236978,6.42220996766357,7.59699790702692,5.83754780114783,8.43094478367342,5.23620828408453,10.580536810308,6.69591032700152,8.78133694399695,5.62414530760926,2.14482922219634,5.68180974211217,4.56114603641173,2.44773191380756,1.87052183685892,2.6649520865105,4.011320628678,5.30450887527676,4.28742608249886,8.29169439458779,8.89523764412299,9.38229520364316,14.7599947507519,10.334225573761,7.57311514409466,6.61577989225619,8.78330784238676,12.7333829043678,9.5795369074663,9.92476573147315,8.01489430873592,11.8341638897916,10.6451314094724,3.25613074443898,7.25745951968465,13.5150597600858,9.6112966254048,11.7320471201727,12.9575930833838,7.73102738799903,9.32059483859718,10.0636896795513,2.8851164307291 | |||
|short_description=p2@RPS6KA3 | |||
}} |
Revision as of 05:03, 23 January 2014
Short description: | p2@RPS6KA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RPS6KA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_ENST00000492128_5end |
EntrezGene: | RPS6KA3 |
HGNC: | 10432 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.46e-14 | 72 |
myeloid cell | 8.11e-13 | 108 |
common myeloid progenitor | 8.11e-13 | 108 |
myeloid lineage restricted progenitor cell | 2.84e-12 | 66 |
granulocyte monocyte progenitor cell | 6.00e-12 | 67 |
defensive cell | 9.91e-11 | 48 |
phagocyte | 9.91e-11 | 48 |
classical monocyte | 2.78e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.78e-10 | 42 |
monopoietic cell | 2.81e-10 | 59 |
monocyte | 2.81e-10 | 59 |
monoblast | 2.81e-10 | 59 |
promonocyte | 2.81e-10 | 59 |
macrophage dendritic cell progenitor | 9.06e-10 | 61 |
hematopoietic stem cell | 9.22e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.77e-29 | 114 |
hematopoietic system | 2.01e-13 | 98 |
blood island | 2.01e-13 | 98 |
bone marrow | 9.70e-11 | 76 |
hemolymphoid system | 1.55e-10 | 108 |
bone element | 2.54e-10 | 82 |
skeletal system | 6.26e-10 | 100 |
skeletal element | 1.99e-09 | 90 |
immune system | 9.12e-08 | 93 |
neural tube | 1.32e-07 | 56 |
neural rod | 1.32e-07 | 56 |
future spinal cord | 1.32e-07 | 56 |
neural keel | 1.32e-07 | 56 |
regional part of nervous system | 2.49e-07 | 53 |
regional part of brain | 2.49e-07 | 53 |
regional part of forebrain | 4.26e-07 | 41 |
forebrain | 4.26e-07 | 41 |
anterior neural tube | 4.26e-07 | 41 |
future forebrain | 4.26e-07 | 41 |