FFCP PHASE1:Mm9::chr7:120512840..120512909,-: Difference between revisions
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{{FFCP|EntrezGene=68815|HGNC=|MCL_coexpression_id=788|UniProt=Q80X66,E9Q6L8|association_with_transcript=0bp_to_ENSMUST00000047091,ENSMUST00000119278,ENSMUST00000129567,NM_133700,uc009jhl.1_5end|description=CAGE_peak_1_at_Btbd10_5end|id=chr7:120512840..120512909,-|ontology_enrichment_celltype=CL:0000540!4.44e-14!33;CL:0000047!4.44e-14!33;CL:0000031!4.44e-14!33;CL:0000404!4.44e-14!33;CL:0000393!4.93e-13!39;CL:0000211!4.93e-13!39;CL:0000117!5.47e-11!23;CL:0000337!5.47e-11!23;CL:0000221!2.09e-08!44;CL:0000133!2.09e-08!44;CL:0002319!4.83e-08!43;CL:0000055!4.13e-07!50|ontology_enrichment_celltype_v019_2=CL:0000540,4.44e-14,33;CL:0000047,4.44e-14,33;CL:0000031,4.44e-14,33;CL:0000404,4.44e-14,33;CL:0000393,4.93e-13,39;CL:0000211,4.93e-13,39;CL:0000117,5.47e-11,23;CL:0000337,5.47e-11,23;CL:0000221,2.09e-08,44;CL:0000133,2.09e-08,44;CL:0002319,4.83e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.50e-21!75;UBERON:0001016!4.50e-21!75;UBERON:0001017!2.70e-20!73;UBERON:0005743!2.70e-20!73;UBERON:0004121!2.54e-19!102;UBERON:0000924!2.54e-19!102;UBERON:0006601!2.54e-19!102;UBERON:0000033!2.70e-18!63;UBERON:0001049!4.08e-17!52;UBERON:0005068!4.08e-17!52;UBERON:0006241!4.08e-17!52;UBERON:0007135!4.08e-17!52;UBERON:0002346!8.53e-17!71;UBERON:0003075!8.53e-17!71;UBERON:0007284!8.53e-17!71;UBERON:0003056!3.13e-16!49;UBERON:0000955!5.59e-16!50;UBERON:0006238!5.59e-16!50;UBERON:0002616!1.33e-15!49;UBERON:0002020!4.02e-15!34;UBERON:0003080!4.11e-14!40;UBERON:0002780!1.20e-13!39;UBERON:0001890!1.20e-13!39;UBERON:0006240!1.20e-13!39;UBERON:0002791!1.48e-12!29;UBERON:0003528!1.48e-12!29;UBERON:0001893!1.48e-12!29;UBERON:0007811!4.02e-11!86;UBERON:0000153!2.01e-10!94;UBERON:0000956!7.75e-09!21;UBERON:0001869!7.75e-09!21;UBERON:0000203!7.75e-09!21;UBERON:0002021!1.30e-07!10;UBERON:0000411!1.30e-07!10;UBERON:0001950!1.30e-07!10;UBERON:0002619!1.73e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.35e-22,95;UBERON:0000924,2.35e-22,95;UBERON:0006601,2.35e-22,95;UBERON:0001016,4.50e-21,75;UBERON:0002346,1.74e-20,64;UBERON:0003075,1.74e-20,64;UBERON:0007284,1.74e-20,64;UBERON:0010371,2.23e-20,73;UBERON:0001017,2.70e-20,73;UBERON:0000073,3.09e-18,54;UBERON:0010314,2.06e-17,92;UBERON:0001049,4.08e-17,52;UBERON:0005068,4.08e-17,52;UBERON:0006241,4.08e-17,52;UBERON:0007135,4.08e-17,52;UBERON:0003056,3.13e-16,49;UBERON:0002020,4.02e-15,34;UBERON:0000955,1.95e-14,47;UBERON:0006238,1.95e-14,47;UBERON:0003080,4.11e-14,40;UBERON:0002616,4.54e-14,46;UBERON:0002780,1.20e-13,39;UBERON:0001890,1.20e-13,39;UBERON:0006240,1.20e-13,39;UBERON:0003528,1.48e-12,29;UBERON:0002791,1.48e-12,29;UBERON:0001893,1.48e-12,29;UBERON:0000956,7.75e-09,21;UBERON:0001869,7.75e-09,21;UBERON:0000203,7.75e-09,21;UBERON:0002021,1.30e-07,10;UBERON:0000411,1.30e-07,10;UBERON:0001950,1.30e-07,10;UBERON:0002619,1.73e-07,17|phase1_expression=24.1824759128239,9.42233600626275,10.4649825059593,11.1911758183527,11.0197060588196,10.5763941304491,10.2789561862031,13.5579489613655,27.7353782638783,25.0449043164533,9.58820622062828,8.05698805852898,15.7504671536709,10.9275503023747,13.3243904726265,11.5410902412201,16.7894850750755,15.4576461025536,18.0991052359575,12.3072999021429,28.2343723301552,8.24114894967348,7.57479388502913,8.63959083084396,8.48814339948529,12.0588712464154,10.3382879078178,8.61884930743556,6.46079626151671,9.57714493087737,8.20402889424627,6.35030673459631,4.92051830067656,0,7.51014211353314,5.15327400611326,7.9626048942324,56.5017701494825,45.3174499823804,53.9229456293012,63.5290007073495,80.5993672250966,67.9714494243615,15.9888958828983,14.5982780956101,14.5001934207728,7.82391344348039,10.0291571935005,9.00713349211335,14.1933826324227,7.41928034614421,7.18762821824858,16.1071301815427,18.859415692295,11.4271891708438,24.6969058594509,19.1977404758967,23.7209162447623,32.3706337375356,43.3772603003067,35.494558596346,4.40497891689872,4.4464739805557,8.09909745553259,6.92206453796882,4.9733608046227,5.99200221036809,8.4528027170742,27.1666784248211,24.1660629613726,27.7628948983824,30.8503063156108,29.5963844875162,31.7251169966731,20.7984672109573,34.9303138911808,42.9451935897616,38.6892634398119,35.1758961156798,34.5542073853108,36.6865450845663,38.5475894212002,28.7558488971422,38.8306200921859,33.9212110064518,54.5062883126285,54.9554687884537,41.9398753106926,31.4263702332714,25.3164726357731,14.4932244350839,2.58127163094416,10.879541339324,3.2382191498269,3.24888208723835,4.92829575807069,13.3422199125164,10.0553890321054,10.6512261887176,6.36011234118612,32.8165168079666,8.98285341900225,5.09610479413291,7.11066703153331,26.8448890853906,24.8292668165597,30.331466700887,9.36307813696292,23.0454716445983,15.8833088799362,12.4909435271618,10.9607572192371,13.6063143381075,13.8664829308413,13.7578787348775,11.3099932196708,10.3821886448437,18.5087176857487,30.9613693182456,15.3678507450039,17.2256384399107,12.6067565815158,13.0474232852686,38.9398460025358,34.3492599174066,9.45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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:68815 | |||
|HGNC= | |||
|MCL_coexpression_id=788 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80X66,uniprot:E9Q6L8 | |||
|association_with_transcript=0bp_to_ENSMUST00000047091,ENSMUST00000119278,ENSMUST00000129567,NM_133700,uc009jhl.1_5end | |||
|cluster_id=chr7:120512840..120512909,- | |||
|description=CAGE_peak_1_at_Btbd10_5end | |||
|id=chr7:120512840..120512909,- | |||
|ontology_enrichment_celltype=CL:0000540!4.44e-14!33;CL:0000047!4.44e-14!33;CL:0000031!4.44e-14!33;CL:0000404!4.44e-14!33;CL:0000393!4.93e-13!39;CL:0000211!4.93e-13!39;CL:0000117!5.47e-11!23;CL:0000337!5.47e-11!23;CL:0000221!2.09e-08!44;CL:0000133!2.09e-08!44;CL:0002319!4.83e-08!43;CL:0000055!4.13e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.44e-14,33;CL:0000047,4.44e-14,33;CL:0000031,4.44e-14,33;CL:0000404,4.44e-14,33;CL:0000393,4.93e-13,39;CL:0000211,4.93e-13,39;CL:0000117,5.47e-11,23;CL:0000337,5.47e-11,23;CL:0000221,2.09e-08,44;CL:0000133,2.09e-08,44;CL:0002319,4.83e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.50e-21!75;UBERON:0001016!4.50e-21!75;UBERON:0001017!2.70e-20!73;UBERON:0005743!2.70e-20!73;UBERON:0004121!2.54e-19!102;UBERON:0000924!2.54e-19!102;UBERON:0006601!2.54e-19!102;UBERON:0000033!2.70e-18!63;UBERON:0001049!4.08e-17!52;UBERON:0005068!4.08e-17!52;UBERON:0006241!4.08e-17!52;UBERON:0007135!4.08e-17!52;UBERON:0002346!8.53e-17!71;UBERON:0003075!8.53e-17!71;UBERON:0007284!8.53e-17!71;UBERON:0003056!3.13e-16!49;UBERON:0000955!5.59e-16!50;UBERON:0006238!5.59e-16!50;UBERON:0002616!1.33e-15!49;UBERON:0002020!4.02e-15!34;UBERON:0003080!4.11e-14!40;UBERON:0002780!1.20e-13!39;UBERON:0001890!1.20e-13!39;UBERON:0006240!1.20e-13!39;UBERON:0002791!1.48e-12!29;UBERON:0003528!1.48e-12!29;UBERON:0001893!1.48e-12!29;UBERON:0007811!4.02e-11!86;UBERON:0000153!2.01e-10!94;UBERON:0000956!7.75e-09!21;UBERON:0001869!7.75e-09!21;UBERON:0000203!7.75e-09!21;UBERON:0002021!1.30e-07!10;UBERON:0000411!1.30e-07!10;UBERON:0001950!1.30e-07!10;UBERON:0002619!1.73e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.35e-22,95;UBERON:0000924,2.35e-22,95;UBERON:0006601,2.35e-22,95;UBERON:0001016,4.50e-21,75;UBERON:0002346,1.74e-20,64;UBERON:0003075,1.74e-20,64;UBERON:0007284,1.74e-20,64;UBERON:0010371,2.23e-20,73;UBERON:0001017,2.70e-20,73;UBERON:0000073,3.09e-18,54;UBERON:0010314,2.06e-17,92;UBERON:0001049,4.08e-17,52;UBERON:0005068,4.08e-17,52;UBERON:0006241,4.08e-17,52;UBERON:0007135,4.08e-17,52;UBERON:0003056,3.13e-16,49;UBERON:0002020,4.02e-15,34;UBERON:0000955,1.95e-14,47;UBERON:0006238,1.95e-14,47;UBERON:0003080,4.11e-14,40;UBERON:0002616,4.54e-14,46;UBERON:0002780,1.20e-13,39;UBERON:0001890,1.20e-13,39;UBERON:0006240,1.20e-13,39;UBERON:0003528,1.48e-12,29;UBERON:0002791,1.48e-12,29;UBERON:0001893,1.48e-12,29;UBERON:0000956,7.75e-09,21;UBERON:0001869,7.75e-09,21;UBERON:0000203,7.75e-09,21;UBERON:0002021,1.30e-07,10;UBERON:0000411,1.30e-07,10;UBERON:0001950,1.30e-07,10;UBERON:0002619,1.73e-07,17 | |||
|phase1_expression=24.1824759128239,9.42233600626275,10.4649825059593,11.1911758183527,11.0197060588196,10.5763941304491,10.2789561862031,13.5579489613655,27.7353782638783,25.0449043164533,9.58820622062828,8.05698805852898,15.7504671536709,10.9275503023747,13.3243904726265,11.5410902412201,16.7894850750755,15.4576461025536,18.0991052359575,12.3072999021429,28.2343723301552,8.24114894967348,7.57479388502913,8.63959083084396,8.48814339948529,12.0588712464154,10.3382879078178,8.61884930743556,6.46079626151671,9.57714493087737,8.20402889424627,6.35030673459631,4.92051830067656,0,7.51014211353314,5.15327400611326,7.9626048942324,56.5017701494825,45.3174499823804,53.9229456293012,63.5290007073495,80.5993672250966,67.9714494243615,15.9888958828983,14.5982780956101,14.5001934207728,7.82391344348039,10.0291571935005,9.00713349211335,14.1933826324227,7.41928034614421,7.18762821824858,16.1071301815427,18.859415692295,11.4271891708438,24.6969058594509,19.1977404758967,23.7209162447623,32.3706337375356,43.3772603003067,35.494558596346,4.40497891689872,4.4464739805557,8.09909745553259,6.92206453796882,4.9733608046227,5.99200221036809,8.4528027170742,27.1666784248211,24.1660629613726,27.7628948983824,30.8503063156108,29.5963844875162,31.7251169966731,20.7984672109573,34.9303138911808,42.9451935897616,38.6892634398119,35.1758961156798,34.5542073853108,36.6865450845663,38.5475894212002,28.7558488971422,38.8306200921859,33.9212110064518,54.5062883126285,54.9554687884537,41.9398753106926,31.4263702332714,25.3164726357731,14.4932244350839,2.58127163094416,10.879541339324,3.2382191498269,3.24888208723835,4.92829575807069,13.3422199125164,10.0553890321054,10.6512261887176,6.36011234118612,32.8165168079666,8.98285341900225,5.09610479413291,7.11066703153331,26.8448890853906,24.8292668165597,30.331466700887,9.36307813696292,23.0454716445983,15.8833088799362,12.4909435271618,10.9607572192371,13.6063143381075,13.8664829308413,13.7578787348775,11.3099932196708,10.3821886448437,18.5087176857487,30.9613693182456,15.3678507450039,17.2256384399107,12.6067565815158,13.0474232852686,38.9398460025358,34.3492599174066,9.45191104271788,18.9307896719354,18.5969846607956,15.3754974758408,34.4518470631092,36.1425476226715,44.6072950000669,48.3231610134529,54.4673924113604,32.2071469067318,41.6960046084137,14.5630290305952,15.4264643556515,12.8888606801174,49.6642779892079,14.7036100547855,22.3005041300469,24.1283253939168,24.4141804893858,25.4456506825966,23.060469651273,26.4238863258435,39.5816157230694,8.40715172438085,16.4522289746003,16.7153567955751,14.2477226077924,20.019401944243,14.9748431604532,18.5203922767149,15.5246728118425,19.6619692447706,17.2423097766859,16.4814829649444,16.9843133479112,16.4168241986767,17.6460820231795,19.8865577891577,16.7249596985293,16.9693824176116,17.4400458562806,16.3646774853768,17.0477399856067,18.7598228901368,20.3567655458078,19.8618583387347,19.8831982898452,13.8316572633362,15.9705638324842,41.6374098156972,39.4124665412659,6.93879444265976,8.19796756656987,11.5175655289026,11.8440702648824,10.8248667510558,11.0925938542838,12.2307924114679,9.70150693174052,7.59246498471219,10.2113351928887,12.3154252312132,8.75408476981064,11.8928093142663,9.88701349519644,9.94235029423593,8.36393347668342,10.8110703543257,10.967857210534,7.88954149711563,16.4957575554705,11.2492442557223,15.850695295212,17.200338097798,11.0707610984702,11.6179058602617,9.50158162197864,5.33614728756868,8.67594549723689,10.0245087507734,8.31989815823959,9.73728582664814,11.8176808278684,10.9489116266011,8.0554918486227,6.48540907100142,6.86403532970204,24.4405951096503,8.93138274404408,8.11297950097858,7.57736633841335,6.99649912735457,3.37710464954357,19.9533445379933,13.4538902357044,12.87423313892,14.0888421193406,12.9079636558676,17.4206507739488,17.377185784679,22.4403695036469,25.8521636334153,20.3747514476873,28.2234940523752,19.8274610806043,21.9309926969687,15.4774492682217,13.5712155545345,17.9488875660174,11.3105782794378,14.0727740615414,30.9862638676438,33.4053306787779,10.9836413402373,17.6729649043061,26.1871822115493,33.1872932652143,24.1274205460735,23.1799734013975,28.9638276307112,26.0430408325726,27.9319384155677,33.6094236598009,33.204173347508,28.5975971615408,17.1747503102005,11.3961986347043,19.3835481630756,19.9613848796768,9.2921596837974,14.0812768969889,11.4882951646605,10.5618844663303,7.67784921490009,15.3717573971964,18.0899805217755,17.0860852854428,16.3988794056972,9.16506598013866,5.27093042874994,10.3135543248187,26.8947288545492,19.9867814374754,17.4634223106719,17.361299837559,25.8916741117719,19.4422011186257,23.2014119048991,16.745572201303,17.835049812842,28.8091616374795,14.7754026696824,21.4352128823924,16.3079070962865,23.1601631724118,19.4576920725112,19.5327670696623,6.41257840585672,34.3036808719443,15.7201210334024,14.0343070214991,14.4451731348375,17.5182665014363,13.5327285443815,16.7008066440762,18.1876920093425,20.1530091346068,22.5265957301211,26.7307773044232,14.3932877079417,15.8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| |||
|short_description=p1@Btbd10 | |||
}} |
Revision as of 01:59, 4 August 2015
Short description: | p1@Btbd10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Btbd10_5end |
Coexpression cluster: | MCL_coexpression_mm9:788 |
Association with transcript: | 0bp_to_ENSMUST00000047091, ENSMUST00000119278, ENSMUST00000129567, NM_133700, uc009jhl.1_5end |
EntrezGene: | 68815 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.44e-14 | 33 |
neuronal stem cell | 4.44e-14 | 33 |
neuroblast | 4.44e-14 | 33 |
electrically signaling cell | 4.44e-14 | 33 |
electrically responsive cell | 4.93e-13 | 39 |
electrically active cell | 4.93e-13 | 39 |
CNS neuron (sensu Vertebrata) | 5.47e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.47e-11 | 23 |
ectodermal cell | 2.09e-08 | 44 |
neurectodermal cell | 2.09e-08 | 44 |
neural cell | 4.83e-08 | 43 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 2.35e-22 | 95 |
ectoderm | 2.35e-22 | 95 |
presumptive ectoderm | 2.35e-22 | 95 |
nervous system | 4.50e-21 | 75 |
neurectoderm | 1.74e-20 | 64 |
neural plate | 1.74e-20 | 64 |
presumptive neural plate | 1.74e-20 | 64 |
ecto-epithelium | 2.23e-20 | 73 |
central nervous system | 2.70e-20 | 73 |
regional part of nervous system | 3.09e-18 | 54 |
structure with developmental contribution from neural crest | 2.06e-17 | 92 |
neural tube | 4.08e-17 | 52 |
neural rod | 4.08e-17 | 52 |
future spinal cord | 4.08e-17 | 52 |
neural keel | 4.08e-17 | 52 |
pre-chordal neural plate | 3.13e-16 | 49 |
gray matter | 4.02e-15 | 34 |
brain | 1.95e-14 | 47 |
future brain | 1.95e-14 | 47 |
anterior neural tube | 4.11e-14 | 40 |
regional part of brain | 4.54e-14 | 46 |
regional part of forebrain | 1.20e-13 | 39 |
forebrain | 1.20e-13 | 39 |
future forebrain | 1.20e-13 | 39 |
brain grey matter | 1.48e-12 | 29 |
regional part of telencephalon | 1.48e-12 | 29 |
telencephalon | 1.48e-12 | 29 |
cerebral cortex | 7.75e-09 | 21 |
cerebral hemisphere | 7.75e-09 | 21 |
pallium | 7.75e-09 | 21 |
occipital lobe | 1.30e-07 | 10 |
visual cortex | 1.30e-07 | 10 |
neocortex | 1.30e-07 | 10 |
regional part of cerebral cortex | 1.73e-07 | 17 |