Personal tools

FFCP PHASE1:Mm9::chr7:119571399..119571466,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP|EntrezGene=57342|HGNC=|MCL_coexpression_id=2355|UniProt=D6RHM9|association_with_transcript=0bp_to_ENSMUST00000139720_5end|description=CAGE_peak_1_at_Parva_5end|id=chr7:119571399..119571466,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!8.79e-09!23;UBERON:0001009!8.79e-09!23;UBERON:0003103!2.69e-07!43;UBERON:0002048!3.75e-07!14;UBERON:0000117!3.75e-07!14;UBERON:0000171!3.75e-07!14;UBERON:0000170!3.75e-07!14;UBERON:0005597!3.75e-07!14;UBERON:0000118!3.75e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.73e-09,23;UBERON:0001009,8.73e-09,23;UBERON:0003103,2.68e-07,43;UBERON:0002048,3.73e-07,14;UBERON:0000117,3.73e-07,14;UBERON:0000171,3.73e-07,14;UBERON:0000170,3.73e-07,14;UBERON:0005597,3.73e-07,14;UBERON:0000118,3.73e-07,14;UBERON:0001008,4.93e-07,19;UBERON:0006554,6.59e-07,18|phase1_expression=47.404058743019,8.72438519098403,8.18998630901165,3.32710632437513,4.50806156951712,32.064940935171,27.7999042308676,0.129123323441576,0,0.234064526321993,0,0,0,0,0.999329285446988,0.607425802169478,0,0.157731082679119,0.137114433605739,0,37.2489610861686,1.19149141441062,1.04479915655574,14.5593104742,16.0586496747019,10.9104073181854,17.6612418425221,21.7625945012748,17.29213117053,15.3738379153558,19.5122849376668,0,0,0,25.9966457776147,18.6182802801511,19.8044275574498,0,0,0,0,0,0,112.299961634215,108.878824129759,85.5327865073436,125.965006440034,80.8873330171457,112.259639377315,114.324780655679,134.806924025224,87.6890642626327,0,0,0,145.094321924274,127.507380772747,130.98071143847,12.5436205732951,9.52183762689659,11.4089652631112,216.182811460106,192.087675960006,11.6986963246582,8.89979726310277,14.209602298922,35.0532129306534,43.8008868066572,14.101787273953,11.0704869431986,9.25429829946081,21.4238238302853,17.2277461942259,10.534208732486,10.4471563409878,9.19218786610021,23.1243350098716,24.0052195600153,23.5017995882053,11.3422207447967,11.8019060247108,12.5019208933622,25.9640189071284,11.8180148106653,21.697351184307,20.6240009831567,24.0608140550484,15.0983551118493,73.0000503731894,65.9739719732238,82.0316503025748,43.0211938490693,25.8389106808945,41.5571457561119,34.4381501247265,30.9138552097162,31.3191056893807,122.539401933624,84.1706654913295,96.1083642668125,67.0414678136999,102.661181931454,180.911720191718,177.766675788333,28.7933084544915,34.9636614355636,35.8922355960496,39.0508868639185,21.4918443427153,36.5167662099469,36.6054039476547,27.4018930480927,36.4372485664572,34.6662073271032,44.9188861258392,43.4806406000677,94.6756726422652,78.3728514505921,5.30766331169925,47.8829875844331,23.1883594383413,27.1530141755724,26.0948465705371,23.4224637609238,26.8091784721222,26.3120766864849,0,0,0,32.2049874720369,10.5225138648284,7.66491547888473,23.4662832259573,23.5258220743904,21.8177446787538,17.1975738851823,96.9510743855011,37.1976842124178,44.9846510011941,40.6152781860895,52.0481771850815,42.0720851113255,52.7582040329673,46.1156742577288,44.1556879492118,43.9430060577035,38.2303036203694,51.2232674063251,35.3531508409861,54.4625510883319,61.7588445815461,50.6342141907698,52.2728828544124,59.8993726418126,45.2720700097476,43.190435899613,0,0,0.568326998791185,65.0374925761476,54.4100459156143,51.6778116393113,65.8150364926884,59.0292695242211,54.6105579621319,51.855069679341,54.9960472869219,57.0982524175459,50.0261943736981,51.2202487926777,48.9655609656969,45.9067960515543,47.642375018158,45.495975959766,26.9171134162083,18.3170210035126,6.60837565967596,26.709507233018,50.12273887578,64.097321433481,61.0831766666722,52.0343493528224,50.0350598650958,46.2248271453519,38.91138304665,52.2095686475114,42.7269854960458,44.7652062092589,50.300734476733,27.8634016682809,38.2564348278209,36.0445704590405,45.7099641296927,52.5543158004753,65.3704866903866,62.7246089763568,61.8708434064726,72.9412526859313,85.8119808776171,69.9672101423314,75.9873842752254,62.1921706165875,37.0565783858936,14.181833985868,12.7763346823582,8.54476027062444,11.1573066763677,12.7823894668781,16.0414286622294,17.5494643844994,15.5649817704034,24.4359657737393,38.8174157623857,36.8419538191818,34.9482193888308,45.9693557863743,39.8262258018645,47.7619086149734,96.0716588866344,48.3203100014736,55.8969869196149,51.9419962472076,57.2644205823945,75.7128283637007,79.0304887741566,81.9561321002755,99.7830462192189,99.8805750315975,111.937247597556,78.162801119407,87.2059158422773,88.5252238518851,0,0,31.4729134732183,43.322069169843,50.2523346661789,40.6724552474945,101.639666133539,31.811336827751,43.2246260600272,49.5857205256731,34.252320239515,40.1467580560287,39.6581639866662,44.1599388030579,42.5051236758639,42.3770993971402,33.994748903401,29.2402397943844,73.6669042230914,84.0469649309445,83.8867840670917,109.870101899709,38.4960901185892,39.573243693262,39.3020624054176,35.8349651536206,41.637566896189,43.3483558600938,38.2473873888967,37.0804404067056,48.8401408387068,36.9763006784905,32.6797686582496,33.0033738394198,23.1498931912576,48.4364342944224,54.7187232401052,58.7283475986563,57.9902564010235,49.7649001109777,51.1747454072596,41.7116980287001,90.3486076045285,103.797714723272,50.5010031545863,27.8657767471101,45.5329683282454,44.510938596979,35.5729585129347,26.2625439592098,33.8117770490627,54.7004640931004,5.12612642393558,41.4837604606077,35.7425437823544,10.5486335922627,7.24479406921433,7.54967971581525,0,0,0.138199973804424,51.5522133728161,50.2974229794005,60.7925206709278,64.5871938114372,72.9718153090496,73.3698214187157,107.621748415087,99.8453745162058,78.2650266532249,45.2356256788357,50.328484360041,2.81846469342095,31.2489581231916,33.0916980914195,40.2513959872179,44.8184587467727,41.7321629962222,47.8817533674676,41.0143812258443,25.7953987287249,6.52277126230216,9.21696020025169,3.16011120628178,28.7869805712033,22.596410576262,9.61414090035683,7.16106782669926,10.1327490938445,9.37524506255757,7.53216588590344,5.85605409699256,5.48689007915999,4.53717833115782,3.02119430293232,2.50150788264857,3.62318396762864,25.1670725812885,36.6276823067207,30.0541419641744,65.8107696147188,117.845652359636,115.049357451575,94.689389746176,49.0903588091061,51.6619267156424,10.7302850097243,17.0320337507655,12.0308057822273,15.6386395932756,19.8673930733486,24.9279986138601,17.550585006027,17.1122057225204,14.5005570874945,19.6748918465692,36.1179969592935,47.8829848081237,40.1223973522215,37.9246478626539,35.843850809385,46.5124076378536,42.6713717379101,32.9656091582231,37.2266283126506,40.1788566704438,31.1779538864995,36.5935102288988,40.7340557493988,40.655971777092,40.549441082663,46.2004880544581,39.6324394731406,42.0542100610877,27.6097553538215,34.8861440718522,35.6584022480832,33.5429273641148,34.0963751624669,36.6272969913468,31.4325330587204,36.5535106092042,36.9514505203001,38.1451081584872,42.9140999752923,34.229678571122,38.5563808903566,45.2135574103836,29.0554040650479,39.0440839788634,41.0891081389831,51.9606002110928,51.6988854664353,45.7675345122875,39.5966847382506,48.3095207871739,41.0406069048146|short_description=p1@Parva}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:57342
|HGNC=
|MCL_coexpression_id=2355
|TSSclassifier=NA
|UniProt=uniprot:D6RHM9
|association_with_transcript=0bp_to_ENSMUST00000139720_5end
|cluster_id=chr7:119571399..119571466,+
|description=CAGE_peak_1_at_Parva_5end
|id=chr7:119571399..119571466,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004535!8.79e-09!23;UBERON:0001009!8.79e-09!23;UBERON:0003103!2.69e-07!43;UBERON:0002048!3.75e-07!14;UBERON:0000117!3.75e-07!14;UBERON:0000171!3.75e-07!14;UBERON:0000170!3.75e-07!14;UBERON:0005597!3.75e-07!14;UBERON:0000118!3.75e-07!14
|ontology_enrichment_uberon_v019_2=UBERON:0004535,8.73e-09,23;UBERON:0001009,8.73e-09,23;UBERON:0003103,2.68e-07,43;UBERON:0002048,3.73e-07,14;UBERON:0000117,3.73e-07,14;UBERON:0000171,3.73e-07,14;UBERON:0000170,3.73e-07,14;UBERON:0005597,3.73e-07,14;UBERON:0000118,3.73e-07,14;UBERON:0001008,4.93e-07,19;UBERON:0006554,6.59e-07,18
|phase1_expression=47.404058743019,8.72438519098403,8.18998630901165,3.32710632437513,4.50806156951712,32.064940935171,27.7999042308676,0.129123323441576,0,0.234064526321993,0,0,0,0,0.999329285446988,0.607425802169478,0,0.157731082679119,0.137114433605739,0,37.2489610861686,1.19149141441062,1.04479915655574,14.5593104742,16.0586496747019,10.9104073181854,17.6612418425221,21.7625945012748,17.29213117053,15.3738379153558,19.5122849376668,0,0,0,25.9966457776147,18.6182802801511,19.8044275574498,0,0,0,0,0,0,112.299961634215,108.878824129759,85.5327865073436,125.965006440034,80.8873330171457,112.259639377315,114.324780655679,134.806924025224,87.6890642626327,0,0,0,145.094321924274,127.507380772747,130.98071143847,12.5436205732951,9.52183762689659,11.4089652631112,216.182811460106,192.087675960006,11.6986963246582,8.89979726310277,14.209602298922,35.0532129306534,43.8008868066572,14.101787273953,11.0704869431986,9.25429829946081,21.4238238302853,17.2277461942259,10.534208732486,10.4471563409878,9.19218786610021,23.1243350098716,24.0052195600153,23.5017995882053,11.3422207447967,11.8019060247108,12.5019208933622,25.9640189071284,11.8180148106653,21.697351184307,20.6240009831567,24.0608140550484,15.0983551118493,73.0000503731894,65.9739719732238,82.0316503025748,43.0211938490693,25.8389106808945,41.5571457561119,34.4381501247265,30.9138552097162,31.3191056893807,122.539401933624,84.1706654913295,96.1083642668125,67.0414678136999,102.661181931454,180.911720191718,177.766675788333,28.7933084544915,34.9636614355636,35.8922355960496,39.0508868639185,21.4918443427153,36.5167662099469,36.6054039476547,27.4018930480927,36.4372485664572,34.6662073271032,44.9188861258392,43.4806406000677,94.6756726422652,78.3728514505921,5.30766331169925,47.8829875844331,23.1883594383413,27.1530141755724,26.0948465705371,23.4224637609238,26.8091784721222,26.3120766864849,0,0,0,32.2049874720369,10.5225138648284,7.66491547888473,23.4662832259573,23.5258220743904,21.8177446787538,17.1975738851823,96.9510743855011,37.1976842124178,44.9846510011941,40.6152781860895,52.0481771850815,42.0720851113255,52.7582040329673,46.1156742577288,44.1556879492118,43.9430060577035,38.2303036203694,51.2232674063251,35.3531508409861,54.4625510883319,61.7588445815461,50.6342141907698,52.2728828544124,59.8993726418126,45.2720700097476,43.190435899613,0,0,0.568326998791185,65.0374925761476,54.4100459156143,51.6778116393113,65.8150364926884,59.0292695242211,54.6105579621319,51.855069679341,54.9960472869219,57.0982524175459,50.0261943736981,51.2202487926777,48.9655609656969,45.9067960515543,47.642375018158,45.495975959766,26.9171134162083,18.3170210035126,6.60837565967596,26.709507233018,50.12273887578,64.097321433481,61.0831766666722,52.0343493528224,50.0350598650958,46.2248271453519,38.91138304665,52.2095686475114,42.7269854960458,44.7652062092589,50.300734476733,27.8634016682809,38.2564348278209,36.0445704590405,45.7099641296927,52.5543158004753,65.3704866903866,62.7246089763568,61.8708434064726,72.9412526859313,85.8119808776171,69.9672101423314,75.9873842752254,62.1921706165875,37.0565783858936,14.181833985868,12.7763346823582,8.54476027062444,11.1573066763677,12.7823894668781,16.0414286622294,17.5494643844994,15.5649817704034,24.4359657737393,38.8174157623857,36.8419538191818,34.9482193888308,45.9693557863743,39.8262258018645,47.7619086149734,96.0716588866344,48.3203100014736,55.8969869196149,51.9419962472076,57.2644205823945,75.7128283637007,79.0304887741566,81.9561321002755,99.7830462192189,99.8805750315975,111.937247597556,78.162801119407,87.2059158422773,88.5252238518851,0,0,31.4729134732183,43.322069169843,50.2523346661789,40.6724552474945,101.639666133539,31.811336827751,43.2246260600272,49.5857205256731,34.252320239515,40.1467580560287,39.6581639866662,44.1599388030579,42.5051236758639,42.3770993971402,33.994748903401,29.2402397943844,73.6669042230914,84.0469649309445,83.8867840670917,109.870101899709,38.4960901185892,39.573243693262,39.3020624054176,35.8349651536206,41.637566896189,43.3483558600938,38.2473873888967,37.0804404067056,48.8401408387068,36.9763006784905,32.6797686582496,33.0033738394198,23.1498931912576,48.4364342944224,54.7187232401052,58.7283475986563,57.9902564010235,49.7649001109777,51.1747454072596,41.7116980287001,90.3486076045285,103.797714723272,50.5010031545863,27.8657767471101,45.5329683282454,44.510938596979,35.5729585129347,26.2625439592098,33.8117770490627,54.7004640931004,5.12612642393558,41.4837604606077,35.7425437823544,10.5486335922627,7.24479406921433,7.54967971581525,0,0,0.138199973804424,51.5522133728161,50.2974229794005,60.7925206709278,64.5871938114372,72.9718153090496,73.3698214187157,107.621748415087,99.8453745162058,78.2650266532249,45.2356256788357,50.328484360041,2.81846469342095,31.2489581231916,33.0916980914195,40.2513959872179,44.8184587467727,41.7321629962222,47.8817533674676,41.0143812258443,25.7953987287249,6.52277126230216,9.21696020025169,3.16011120628178,28.7869805712033,22.596410576262,9.61414090035683,7.16106782669926,10.1327490938445,9.37524506255757,7.53216588590344,5.85605409699256,5.48689007915999,4.53717833115782,3.02119430293232,2.50150788264857,3.62318396762864,25.1670725812885,36.6276823067207,30.0541419641744,65.8107696147188,117.845652359636,115.049357451575,94.689389746176,49.0903588091061,51.6619267156424,10.7302850097243,17.0320337507655,12.0308057822273,15.6386395932756,19.8673930733486,24.9279986138601,17.550585006027,17.1122057225204,14.5005570874945,19.6748918465692,36.1179969592935,47.8829848081237,40.1223973522215,37.9246478626539,35.843850809385,46.5124076378536,42.6713717379101,32.9656091582231,37.2266283126506,40.1788566704438,31.1779538864995,36.5935102288988,40.7340557493988,40.655971777092,40.549441082663,46.2004880544581,39.6324394731406,42.0542100610877,27.6097553538215,34.8861440718522,35.6584022480832,33.5429273641148,34.0963751624669,36.6272969913468,31.4325330587204,36.5535106092042,36.9514505203001,38.1451081584872,42.9140999752923,34.229678571122,38.5563808903566,45.2135574103836,29.0554040650479,39.0440839788634,41.0891081389831,51.9606002110928,51.6988854664353,45.7675345122875,39.5966847382506,48.3095207871739,41.0406069048146
|short_description=p1@Parva
}}

Revision as of 01:45, 4 August 2015

Short description:p1@Parva
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Parva_5end
Coexpression cluster:MCL_coexpression_mm9:2355
Association with transcript: 0bp_to_ENSMUST00000139720_5end
EntrezGene:57342
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Parva

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G747.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I58.72
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.19
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.33
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I732.06
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I827.80
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A337.25
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.04
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.56
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D216.06
GP2+ M cell, pool1.CNhs13228.11845-124H910.91
GP2+ M cell, pool2.CNhs13231.11846-124I117.66
GP2+ M cell, pool3.CNhs13240.11847-124I221.76
Ileum epithelium, pool1.CNhs13199.10252-104B917.29
Ileum epithelium, pool2.CNhs13232.10253-104C115.37
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C819.51
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F526.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F618.62
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F719.80
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8112.30
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9108.88
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B385.53
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7125.97
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C280.89
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B8112.26
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C3114.32
Mouse Astrocytes, donor2.CNhs12078.11552-120C4134.81
Mouse Astrocytes, donor3.CNhs12107.11633-122C487.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C1145.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E1127.51
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C5130.98
Mouse Granule cells, donor1.CNhs12131.11713-123C312.54
Mouse Granule cells, donor2.CNhs12357.11731-123E39.52
Mouse Granule cells, donor3.CNhs12108.11636-122C711.41
Mouse Meningeal cells, donor1.CNhs12132.11716-123C6216.18
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1192.09
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C711.70
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E78.90
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D214.21
Mouse Microglia, donor1.CNhs12629.11718-123C835.05
Mouse Microglia, donor2.CNhs12634.11736-123E843.80
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D514.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.07
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D99.25
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.42
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D517.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D210.53
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F210.45
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.01
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D723.50
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D411.34
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F411.80
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D812.50
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E511.82
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I621.70
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D620.62
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F624.06
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.10
Mouse Schwann, donor1.CNhs12507.11728-123D973.00
Mouse Schwann, donor2.CNhs12573.11746-123F965.97
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G382.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F743.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C425.84
Mouse hepatocyte, donor3.CNhs12615.11637-122C841.56
Mouse hepatocyte, donor6.CNhs13090.11822-124F434.44
Mouse hepatocyte, donor8.CNhs13091.11824-124F630.91
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A731.32
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7122.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E384.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I896.11
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G667.04
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1102.66
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8180.91
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6177.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G128.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G234.96
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G335.89
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B639.05
accessory axillary lymph node, adult.CNhs10475.1063-29H921.49
adrenal gland, adult.CNhs10508.49-24D736.52
adrenal gland, embryo E14.CNhs11038.406-44C536.61
adrenal gland, embryo E16.CNhs11004.1254-43D627.40
adrenal gland, embryo E17.CNhs11043.1263-45I136.44
adrenal gland, embryo E18.CNhs11026.1262-18F534.67
adrenal gland, neonate N00.CNhs11191.1311-23C144.92
adrenal gland, neonate N25.CNhs11223.1377-27I343.48
amnion, adult pregnant day17.5.CNhs10488.583-22A894.68
aorta, adult.CNhs10498.46-23H178.37
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F547.88
bone (os femoris), neonate N16.CNhs11225.1525-43A623.19
bone (os femoris), neonate N20.CNhs11195.1350-25C327.15
cecum, adult.CNhs10467.37-13H426.09
cerebellum, adult.CNhs10494.15-8B223.42
cerebellum, neonate N30.CNhs11135.1395-42I226.81
colon, adult.CNhs10468.36-18H726.31
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A432.20
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F17.66
cortex, adult.CNhs10473.12-14D523.47
cortex, neonate N30.CNhs11107.1392-42F223.53
diencephalon, adult.CNhs10482.20-12F221.82
diencephalon, neonate N30.CNhs11201.1388-42B217.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B196.95
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A237.20
epididymis, adult.CNhs10490.58-23B244.98
eyeball, adult.CNhs10484.31-12G440.62
eyeball, embryo E12.CNhs11016.345-16C652.05
eyeball, embryo E14.CNhs10521.399-16E242.07
eyeball, embryo E15.CNhs10593.426-16C952.76
eyeball, embryo E17.CNhs11023.1261-18D446.12
eyeball, neonate N00.CNhs11207.633-15C644.16
eyeball, neonate N01.CNhs11140.1532-43E743.94
eyeball, neonate N02.CNhs11205.1551-44G838.23
eyeball, neonate N16.CNhs11188.777-19A251.22
forelimb, embryo E11.CNhs10596.335-25E235.35
forelimb, embryo E12.CNhs10600.359-14H254.46
forelimb, embryo E13.CNhs10589.384-1E261.76
forelimb, embryo E14.CNhs10577.413-26A850.63
forelimb, embryo E15.CNhs11007.437-20E752.27
forelimb, embryo E17.CNhs10598.1517-43C459.90
forelimb, embryo E18.CNhs11008.1520-43B545.27
gonad, embryo E13.CNhs11044.1564-45I643.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E965.04
heart, embryo E12.CNhs11015.353-12F554.41
heart, embryo E13.CNhs11013.376-3I951.68
heart, embryo E14.CNhs10597.403-26D465.82
heart, embryo E15.CNhs11017.431-16C859.03
heart, embryo E16.CNhs11021.457-17C654.61
heart, embryo E17.CNhs11025.479-18E551.86
heart, embryo E18.CNhs11030.1283-20G355.00
heart, neonate N00.CNhs11213.639-21E357.10
heart, neonate N03.CNhs11221.1349-25I250.03
heart, neonate N10.CNhs11118.749-24G151.22
heart, neonate N16.CNhs11209.782-15G148.97
heart, neonate N20.CNhs11127.821-26I645.91
heart, neonate N25.CNhs11196.1351-25D347.64
heart, neonate N30.CNhs11202.1390-42D245.50
hippocampus, adult.CNhs10478.13-16E826.92
hippocampus, neonate N00.CNhs11228.627-43G118.32
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A326.71
intestine, embryo E12.CNhs11019.1251-16I550.12
intestine, embryo E13.CNhs11010.381-16D564.10
intestine, embryo E15.CNhs10602.976-16D861.08
intestine, embryo E16.CNhs10585.463-22H452.03
intestine, embryo E17.CNhs10582.482-18D350.04
intestine, embryo E18.CNhs10526.1289-20F746.22
intestine, neonate N00.CNhs11126.644-26D138.91
intestine, neonate N01.CNhs11192.1322-23E952.21
intestine, neonate N06.CNhs11102.688-20B842.73
intestine, neonate N07.CNhs11095.720-20F244.77
intestine, neonate N10.CNhs11098.755-23A550.30
intestine, neonate N20.CNhs11187.827-18D127.86
intestine, neonate N25.CNhs11121.1352-25E338.26
intestine, neonate N30.CNhs11131.1384-42G136.04
kidney, embryo E14.CNhs10606.411-4I945.71
kidney, embryo E15.CNhs10997.434-16F852.55
kidney, embryo E16.CNhs10584.464-22A565.37
kidney, embryo E17.CNhs11028.483-18I262.72
kidney, embryo E18.CNhs11001.1288-20C761.87
kidney, neonate N00.CNhs11214.646-21G772.94
kidney, neonate N10.CNhs11206.758-6D585.81
kidney, neonate N20.CNhs11113.832-19I169.97
kidney, neonate N25.CNhs11122.1353-25F375.99
kidney, neonate N30.CNhs11203.1385-42H162.19
liver, adult pregnant day01.CNhs10466.508-5B237.06
liver, embryo E12.CNhs10601.355-15F814.18
liver, embryo E13.CNhs10524.378-3H612.78
liver, embryo E14.CNhs10594.409-16E18.54
liver, embryo E15.CNhs10520.433-16D711.16
liver, embryo E16.CNhs10523.462-17F512.78
liver, embryo E17.CNhs10510.481-18A316.04
liver, embryo E18.CNhs10579.499-43G417.55
liver, neonate N00.CNhs11117.641-24F415.56
liver, neonate N03.CNhs11123.1345-25G224.44
liver, neonate N06.CNhs11101.684-20A838.82
liver, neonate N07.CNhs11103.716-20H236.84
liver, neonate N10.CNhs11115.751-24B934.95
liver, neonate N20.CNhs11220.823-25A345.97
liver, neonate N25.CNhs11198.1368-26H139.83
liver, neonate N30.CNhs11106.1382-42D147.76
lung, adult.CNhs10474.28-22B196.07
lung, embryo E12.CNhs10522.354-16G248.32
lung, embryo E14.CNhs10604.404-26F855.90
lung, embryo E15.CNhs11020.432-17C551.94
lung, embryo E16.CNhs10998.458-17B657.26
lung, embryo E17.CNhs10605.480-44A675.71
lung, embryo E18.CNhs10583.1287-20I679.03
lung, neonate N00.CNhs11224.640-42C681.96
lung, neonate N06.CNhs11212.683-20E599.78
lung, neonate N07.CNhs11111.715-19A399.88
lung, neonate N10.CNhs11219.750-23E6111.94
lung, neonate N20.CNhs11109.822-18A478.16
lung, neonate N25.CNhs11119.1359-25C787.21
lung, neonate N30.CNhs11133.1394-42H288.53
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B631.47
mammary gland, adult pregnant day19.CNhs10476.588-5H243.32
medulla oblongata, adult.CNhs10477.17-12C250.25
medulla oblongata, neonate N30.CNhs11200.1396-42A340.67
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C7101.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C231.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E143.22
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E249.59
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E334.25
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D740.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D839.66
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D944.16
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D442.51
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D542.38
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D633.99
olfactory brain, adult.CNhs10489.18-22I929.24
ovary, adult.CNhs10507.91-2I773.67
ovary, embryo E18.CNhs11040.505-44H784.05
ovary, neonate N00.CNhs11217.1299-22I483.89
oviduct, adult pregnant day01.CNhs10500.988-6G6109.87
pancreas, adult.CNhs10486.34-16E438.50
pancreas, embryo E14.CNhs11012.405-44F439.57
pancreas, embryo E15.CNhs11042.1556-45F239.30
pancreas, embryo E16.CNhs11003.460-26E535.83
pancreas, embryo E17.CNhs10599.1558-45G341.64
pancreas, embryo E18.CNhs10580.1535-43I743.35
pancreas, neonate N00.CNhs11105.645-26G938.25
pancreas, neonate N01.CNhs11138.1531-43D737.08
pancreas, neonate N02.CNhs11139.1539-43D848.84
pancreas, neonate N16.CNhs11136.787-43B636.98
pancreas, neonate N25.CNhs11094.1555-45E232.68
pancreas, neonate N30.CNhs11182.1548-44H533.00
pituitary gland, adult.CNhs10493.21-1G823.15
pituitary gland, embryo E12.CNhs11018.346-16E648.44
pituitary gland, embryo E13.CNhs11009.370-44C754.72
pituitary gland, embryo E14.CNhs11037.398-44A558.73
pituitary gland, embryo E15.CNhs10592.427-16B957.99
pituitary gland, embryo E16.CNhs11036.449-43F649.76
pituitary gland, embryo E17.CNhs11039.1265-44F551.17
pituitary gland, neonate N00.CNhs11190.1308-22E941.71
placenta, adult pregnant day10.CNhs10472.539-13I790.35
placenta, adult pregnant day17.CNhs10464.577-18G3103.80
prostate, adult.CNhs10470.859-1F850.50
skin, adult.CNhs10492.30-1C327.87
skin, neonate N00.CNhs11124.650-25G445.53
skin, neonate N03.CNhs11215.662-22H344.51
skin, neonate N06.CNhs11097.693-20I535.57
skin, neonate N10.CNhs11108.762-6C426.26
small intestine, neonate N16.CNhs11114.790-21I133.81
spinal cord, adult.CNhs10505.24-13C954.70
spleen, adult.CNhs10465.25-2G25.13
spleen, embryo E16.CNhs11035.461-43C141.48
spleen, embryo E18.CNhs11011.1271-21F235.74
spleen, neonate N10.CNhs11116.752-24D110.55
spleen, neonate N20.CNhs11112.824-19H17.24
spleen, neonate N25.CNhs11099.1354-25G37.55
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H651.55
stomach, embryo E12.CNhs10588.356-43E350.30
stomach, embryo E15.CNhs10603.1252-16G860.79
stomach, embryo E16.CNhs11022.459-17D464.59
stomach, embryo E17.CNhs11006.1035-18D572.97
stomach, embryo E18.CNhs10999.1286-20C673.37
stomach, neonate N03.CNhs11193.1340-24B8107.62
stomach, neonate N07.CNhs11210.718-18A999.85
stomach, neonate N25.CNhs11104.1355-25E478.27
stomach, neonate N30.CNhs11134.1386-42I145.24
submandibular gland, adult.CNhs10469.59-29C150.33
testis, adult.CNhs10504.57-7G52.82
testis, embryo E13.CNhs11031.389-23F531.25
testis, embryo E15.CNhs11034.443-27C533.09
testis, embryo E16.CNhs11033.470-26G540.25
testis, embryo E17.CNhs11029.486-18I544.82
testis, embryo E18.CNhs11027.503-18G541.73
testis, neonate N00.CNhs11189.1300-22B747.88
testis, neonate N07.CNhs11222.726-26I441.01
testis, neonate N10.CNhs11204.763-44D925.80
testis, neonate N20.CNhs11110.839-18H36.52
testis, neonate N30.CNhs11130.1391-42E29.22
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I428.79
thymus, embryo E15.CNhs11005.430-45I222.60
thymus, embryo E16.CNhs11002.456-26C59.61
thymus, embryo E17.CNhs10581.478-18C17.16
thymus, embryo E18.CNhs10595.1273-19G410.13
thymus, neonate N02.CNhs11181.1541-43F89.38
thymus, neonate N03.CNhs11137.2104-43C77.53
thymus, neonate N06.CNhs11197.681-26C45.86
thymus, neonate N07.CNhs11211.713-19D35.49
thymus, neonate N10.CNhs11194.748-24E44.54
thymus, neonate N20.CNhs11186.820-7A23.02
thymus, neonate N25.CNhs11125.1362-25G72.50
thymus, neonate N30.CNhs11132.1393-42G23.62
tongue, adult.CNhs10499.32-1B425.17
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H336.63
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F730.05
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G565.81
urinary bladder, adult.CNhs10481.879-12E4117.85
uterus, adult pregnant day19.CNhs10497.590-15F5115.05
uterus, adult.CNhs10509.92-27E594.69
vagina, adult.CNhs10502.89-27D549.09
vesicular gland, adult.CNhs10491.51-27F851.66
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.64
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A419.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A524.93
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.11
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A814.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I836.12
whole body, embryo E12.CNhs10587.857-27C947.88
whole body, embryo E13.CNhs10512.372-23H240.12
whole body, embryo E14.5.CNhs10578.420-27D237.92
whole body, embryo E14.CNhs10519.395-14B135.84
whole body, embryo E16.CNhs10514.453-14F246.51
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G542.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G532.97
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G537.23
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G540.18
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G531.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G536.59
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G540.73
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G540.66
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G540.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G546.20
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G539.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G542.05
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G527.61
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G534.89
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G535.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G533.54
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G534.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G536.63
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G531.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G536.55
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G536.95
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G538.15
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G542.91
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G534.23
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G538.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G545.21
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G529.06
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G539.04
whole body, embryo E17.5.CNhs10513.490-9F941.09
whole body, embryo E17.CNhs10517.475-3I551.96
whole body, embryo E18.CNhs10516.493-3B351.70
whole body, neonate N00.CNhs10525.657-19C245.77
whole body, neonate N01.CNhs10576.659-23C639.60
whole body, neonate N06.CNhs10515.692-21D148.31
whole body, neonate N10.CNhs10518.761-6B441.04





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
cardiovascular system8.73e-0923
circulatory system8.73e-0923
compound organ2.68e-0743
lung3.73e-0714
respiratory tube3.73e-0714
respiration organ3.73e-0714
pair of lungs3.73e-0714
lung primordium3.73e-0714
lung bud3.73e-0714
renal system4.93e-0719
urinary system structure6.59e-0718
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:119571399..119571466,%2B&oldid=3723217"