FFCP PHASE1:Mm9::chr7:109378540..109378560,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=233575|HGNC=|MCL_coexpression_id=27|UniProt=Q3TQR0,D3YYE3|association_with_transcript=27bp_to_ENSMUST00000120119,uc009irj.1_5end|description=CAGE_peak_12_at_Pgap2_5end|id=chr7:109378540..109378560,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003101!1.94e-28!16;UBERON:0000079!1.94e-28!16;UBERON:0003135!1.80e-26!15;UBERON:0000473!1.56e-24!14;UBERON:0000991!4.66e-24!18;UBERON:0005564!4.66e-24!18;UBERON:0004176!1.34e-22!17;UBERON:0009196!1.34e-22!17;UBERON:0009117!1.34e-22!17;UBERON:0005156!3.04e-20!26;UBERON:0000990!3.04e-20!26;UBERON:0003064!1.21e-19!14;UBERON:0003133!1.57e-19!24;UBERON:0002369!5.63e-12!7;UBERON:0006858!5.63e-12!7;UBERON:0003886!5.94e-12!38;UBERON:0002553!1.60e-11!39;UBERON:0002323!9.74e-11!37;UBERON:0004458!9.74e-11!37;UBERON:0000464!4.32e-10!57;UBERON:0002342!5.10e-08!10;UBERON:0005062!5.10e-08!10;UBERON:0005157!5.86e-08!27;UBERON:0000080!8.21e-08!4;UBERON:0005904!8.21e-08!4;UBERON:0006947!8.21e-08!4;UBERON:0002120!8.21e-08!4;UBERON:0004054!8.21e-08!4;UBERON:0004875!8.21e-08!4;UBERON:0004876!8.21e-08!4;UBERON:0005721!8.21e-08!4;UBERON:0005754!8.21e-08!4;UBERON:0007297!8.21e-08!4;UBERON:0000926!2.85e-07!193;UBERON:0004120!2.85e-07!193;UBERON:0006603!2.85e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0003101,2.22e-45,16;UBERON:0000079,2.22e-45,16;UBERON:0003135,6.41e-41,15;UBERON:0000473,1.48e-36,14;UBERON:0004176,2.13e-35,17;UBERON:0009196,2.13e-35,17;UBERON:0009117,2.13e-35,17;UBERON:0000991,2.47e-33,18;UBERON:0005564,2.47e-33,18;UBERON:0005156,1.75e-31,26;UBERON:0000990,1.75e-31,26;UBERON:0003133,3.43e-29,24;UBERON:0003886,1.09e-17,38;UBERON:0002553,3.51e-17,39;UBERON:0002323,2.86e-15,37;UBERON:0004458,2.86e-15,37;UBERON:0003064,1.33e-11,14;UBERON:0010147,1.19e-10,2;UBERON:0003937,1.19e-10,2;UBERON:0005399,1.19e-10,2;UBERON:0000926,1.97e-09,120;UBERON:0004120,1.97e-09,120;UBERON:0006603,1.97e-09,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0.173485326766136,0.913396434936424,2.07553947530453,1.65794904607885,1.64624189989987,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.622034853050465,4.80173241023982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,2.17562273527484,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5853631066382,0,0,0.301564624640779,1.07435109602823,0.984845398470368,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,1.12738587736838,0.598066184175915,1.32366792365678,1.75006069509643,1.42075805825504,1.520605129417,1.87771581833206,1.5624526181274,1.99232754408851,1.20792060413003,4.32045009386798,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p12@Pgap2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:233575 | |||
|HGNC= | |||
|MCL_coexpression_id=27 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TQR0,uniprot:D3YYE3 | |||
|association_with_transcript=27bp_to_ENSMUST00000120119,uc009irj.1_5end | |||
|cluster_id=chr7:109378540..109378560,+ | |||
|description=CAGE_peak_12_at_Pgap2_5end | |||
|id=chr7:109378540..109378560,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003101!1.94e-28!16;UBERON:0000079!1.94e-28!16;UBERON:0003135!1.80e-26!15;UBERON:0000473!1.56e-24!14;UBERON:0000991!4.66e-24!18;UBERON:0005564!4.66e-24!18;UBERON:0004176!1.34e-22!17;UBERON:0009196!1.34e-22!17;UBERON:0009117!1.34e-22!17;UBERON:0005156!3.04e-20!26;UBERON:0000990!3.04e-20!26;UBERON:0003064!1.21e-19!14;UBERON:0003133!1.57e-19!24;UBERON:0002369!5.63e-12!7;UBERON:0006858!5.63e-12!7;UBERON:0003886!5.94e-12!38;UBERON:0002553!1.60e-11!39;UBERON:0002323!9.74e-11!37;UBERON:0004458!9.74e-11!37;UBERON:0000464!4.32e-10!57;UBERON:0002342!5.10e-08!10;UBERON:0005062!5.10e-08!10;UBERON:0005157!5.86e-08!27;UBERON:0000080!8.21e-08!4;UBERON:0005904!8.21e-08!4;UBERON:0006947!8.21e-08!4;UBERON:0002120!8.21e-08!4;UBERON:0004054!8.21e-08!4;UBERON:0004875!8.21e-08!4;UBERON:0004876!8.21e-08!4;UBERON:0005721!8.21e-08!4;UBERON:0005754!8.21e-08!4;UBERON:0007297!8.21e-08!4;UBERON:0000926!2.85e-07!193;UBERON:0004120!2.85e-07!193;UBERON:0006603!2.85e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003101,2.22e-45,16;UBERON:0000079,2.22e-45,16;UBERON:0003135,6.41e-41,15;UBERON:0000473,1.48e-36,14;UBERON:0004176,2.13e-35,17;UBERON:0009196,2.13e-35,17;UBERON:0009117,2.13e-35,17;UBERON:0000991,2.47e-33,18;UBERON:0005564,2.47e-33,18;UBERON:0005156,1.75e-31,26;UBERON:0000990,1.75e-31,26;UBERON:0003133,3.43e-29,24;UBERON:0003886,1.09e-17,38;UBERON:0002553,3.51e-17,39;UBERON:0002323,2.86e-15,37;UBERON:0004458,2.86e-15,37;UBERON:0003064,1.33e-11,14;UBERON:0010147,1.19e-10,2;UBERON:0003937,1.19e-10,2;UBERON:0005399,1.19e-10,2;UBERON:0000926,1.97e-09,120;UBERON:0004120,1.97e-09,120;UBERON:0006603,1.97e-09,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0.35333957451034,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.148442139064825,0.173485326766136,0.913396434936424,2.07553947530453,1.65794904607885,1.64624189989987,0.376999773989026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.622034853050465,4.80173241023982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,2.17562273527484,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5853631066382,0,0,0.301564624640779,1.07435109602823,0.984845398470368,0,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0,0,0.209088296014469,0,0,0,0.26175594198403,0,0,1.12738587736838,0.598066184175915,1.32366792365678,1.75006069509643,1.42075805825504,1.520605129417,1.87771581833206,1.5624526181274,1.99232754408851,1.20792060413003,4.32045009386798,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0,0,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p12@Pgap2 | |||
}} |
Revision as of 23:05, 3 August 2015
Short description: | p12@Pgap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Pgap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:27 |
Association with transcript: | 27bp_to_ENSMUST00000120119, uc009irj.1_5end |
EntrezGene: | 233575 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male organism | 2.22e-45 | 16 |
male reproductive system | 2.22e-45 | 16 |
male reproductive organ | 6.41e-41 | 15 |
testis | 1.48e-36 | 14 |
external genitalia | 2.13e-35 | 17 |
indifferent external genitalia | 2.13e-35 | 17 |
indifferent gonad | 2.13e-35 | 17 |
gonad | 2.47e-33 | 18 |
gonad primordium | 2.47e-33 | 18 |
reproductive structure | 1.75e-31 | 26 |
reproductive system | 1.75e-31 | 26 |
reproductive organ | 3.43e-29 | 24 |
body cavity precursor | 1.09e-17 | 38 |
anatomical cavity | 3.51e-17 | 39 |
body cavity | 2.86e-15 | 37 |
body cavity or lining | 2.86e-15 | 37 |
intermediate mesoderm | 1.33e-11 | 14 |
male accessory sex gland | 1.19e-10 | 2 |
sex gland | 1.19e-10 | 2 |
male reproductive gland | 1.19e-10 | 2 |
mesoderm | 1.97e-09 | 120 |
mesoderm-derived structure | 1.97e-09 | 120 |
presumptive mesoderm | 1.97e-09 | 120 |