FFCP PHASE1:Mm9::chr7:107855183..107855209,+: Difference between revisions
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{{FFCP|EntrezGene=319604|HGNC=|UniProt=Q8BGZ2|association_with_transcript=0bp_to_ENSMUST00000084914_5end|description=CAGE_peak_3_at_Fam168a_5end|id=chr7:107855183..107855209,+|ontology_enrichment_celltype=CL:0000540!2.61e-14!33;CL:0000047!2.61e-14!33;CL:0000031!2.61e-14!33;CL:0000404!2.61e-14!33;CL:0000393!3.61e-14!39;CL:0000211!3.61e-14!39;CL:0000117!2.53e-13!23;CL:0000337!2.53e-13!23;CL:0002319!2.68e-13!43;CL:0000221!3.23e-13!44;CL:0000133!3.23e-13!44;CL:0000055!6.69e-13!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.61e-14,33;CL:0000047,2.61e-14,33;CL:0000031,2.61e-14,33;CL:0000404,2.61e-14,33;CL:0000393,3.61e-14,39;CL:0000211,3.61e-14,39;CL:0000117,2.53e-13,23;CL:0000337,2.53e-13,23;CL:0002319,2.68e-13,43;CL:0000221,3.23e-13,44;CL:0000133,3.23e-13,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.81e-29!73;UBERON:0005743!3.81e-29!73;UBERON:0000073!1.26e-27!75;UBERON:0001016!1.26e-27!75;UBERON:0004121!3.65e-23!102;UBERON:0000924!3.65e-23!102;UBERON:0006601!3.65e-23!102;UBERON:0001049!6.71e-22!52;UBERON:0005068!6.71e-22!52;UBERON:0006241!6.71e-22!52;UBERON:0007135!6.71e-22!52;UBERON:0000955!1.88e-20!50;UBERON:0006238!1.88e-20!50;UBERON:0002616!6.53e-20!49;UBERON:0000033!1.09e-19!63;UBERON:0002346!1.34e-19!71;UBERON:0003075!1.34e-19!71;UBERON:0007284!1.34e-19!71;UBERON:0002020!2.01e-18!34;UBERON:0003056!1.64e-16!49;UBERON:0003080!6.30e-16!40;UBERON:0002791!1.72e-15!29;UBERON:0003528!1.72e-15!29;UBERON:0001893!1.72e-15!29;UBERON:0002780!2.98e-15!39;UBERON:0001890!2.98e-15!39;UBERON:0006240!2.98e-15!39;UBERON:0000153!4.34e-14!94;UBERON:0000025!1.02e-13!114;UBERON:0004111!3.21e-12!122;UBERON:0007811!1.58e-11!86;UBERON:0000956!2.14e-11!21;UBERON:0001869!2.14e-11!21;UBERON:0000203!2.14e-11!21;UBERON:0002619!5.96e-09!17;UBERON:0000468!1.32e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.81e-29,73;UBERON:0001016,1.26e-27,75;UBERON:0004121,9.11e-26,95;UBERON:0000924,9.11e-26,95;UBERON:0006601,9.11e-26,95;UBERON:0000073,5.54e-23,54;UBERON:0002346,7.97e-23,64;UBERON:0003075,7.97e-23,64;UBERON:0007284,7.97e-23,64;UBERON:0001049,6.70e-22,52;UBERON:0005068,6.70e-22,52;UBERON:0006241,6.70e-22,52;UBERON:0007135,6.70e-22,52;UBERON:0010371,1.45e-20,73;UBERON:0000955,1.13e-18,47;UBERON:0006238,1.13e-18,47;UBERON:0002020,2.01e-18,34;UBERON:0002616,3.84e-18,46;UBERON:0003056,1.64e-16,49;UBERON:0010314,3.55e-16,92;UBERON:0003080,6.30e-16,40;UBERON:0003528,1.72e-15,29;UBERON:0002791,1.72e-15,29;UBERON:0001893,1.72e-15,29;UBERON:0002780,2.98e-15,39;UBERON:0001890,2.98e-15,39;UBERON:0006240,2.98e-15,39;UBERON:0000025,1.02e-13,114;UBERON:0004111,3.21e-12,122;UBERON:0000956,2.14e-11,21;UBERON:0001869,2.14e-11,21;UBERON:0000203,2.14e-11,21;UBERON:0002619,5.96e-09,17|phase1_expression=11.0502704502308,2.44282785347553,2.27499619694768,5.74682001482977,6.01074875935617,2.18243053485457,2.56973904655078,13.2997023144824,1.97104211012333,4.21316147379588,0.856089841127525,0.797721589953364,16.606470803327,14.3369459967156,3.99731714178795,4.04950534779652,2.09868563438444,6.62470547252299,6.30726394586398,6.36584477697045,14.4573593256819,4.56738375524072,3.6567970479451,3.67982572424835,1.83527424853736,2.8711598205751,3.4460959692726,1.50829862880122,2.85035129184561,2.77233142735924,0.886922042621219,3.17515336729816,0.61506478758457,0,2.02196133825892,1.66234645358492,2.45003227514843,7.11503772252743,6.2506827561904,7.32933241563318,7.64700934440319,6.83045484958446,3.88408282424923,18.0032449705076,19.2616169317078,15.6014739337429,18.7773922643529,9.3750817243592,18.8930117151646,13.8045228342741,13.0187372111587,20.125359011096,3.18786951509699,9.42970784614748,10.4189077734164,10.2903774414379,17.7650732762029,13.4074743992135,42.2841403196559,48.667170093027,44.3681982454325,23.3802727127701,22.2323699027785,6.74924787961049,14.8329954385046,5.6838409195688,20.6724076257699,24.2057532352579,45.8308086403471,47.5220902927551,41.854667308925,39.7054868321287,42.6276284036614,39.5645281464302,26.7408864140879,34.9303138911808,42.9451935897616,41.2430102015156,41.7809770456982,38.2470234417562,30.1909223887952,32.8175423450759,38.806436861192,33.2029939918691,33.6156145108982,40.9533733808398,45.5589378557129,45.4814647813733,4.24066682665831,11.7891633766585,14.7830889237856,8.60423876981386,8.83962733820076,10.7940638327563,14.9448576012964,15.2329141613094,8.98844288843212,11.759692257886,8.57293815189467,7.0667914902068,14.2251853974447,15.3991772897181,20.3844191765317,14.2213340630666,3.68034769719064,1.26679932737549,2.02209778005913,11.1900202124679,44.7962538709607,14.398887489288,8.32729568477452,10.6562917409249,8.07154240396205,7.83757730873637,13.9930561491489,10.5559936716927,9.14621380617183,24.4372913194651,9.73071607144862,13.2648816956876,9.71702681225732,7.27312879702833,7.45567044872489,56.5066938232286,44.193255137639,3.0654846625031,3.11519323715393,2.39961092397363,3.04968544975355,49.880282921806,49.8675657072303,49.0051973240171,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319604 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BGZ2 | |||
|association_with_transcript=0bp_to_ENSMUST00000084914_5end | |||
|cluster_id=chr7:107855183..107855209,+ | |||
|description=CAGE_peak_3_at_Fam168a_5end | |||
|id=chr7:107855183..107855209,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.61e-14!33;CL:0000047!2.61e-14!33;CL:0000031!2.61e-14!33;CL:0000404!2.61e-14!33;CL:0000393!3.61e-14!39;CL:0000211!3.61e-14!39;CL:0000117!2.53e-13!23;CL:0000337!2.53e-13!23;CL:0002319!2.68e-13!43;CL:0000221!3.23e-13!44;CL:0000133!3.23e-13!44;CL:0000055!6.69e-13!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.61e-14,33;CL:0000047,2.61e-14,33;CL:0000031,2.61e-14,33;CL:0000404,2.61e-14,33;CL:0000393,3.61e-14,39;CL:0000211,3.61e-14,39;CL:0000117,2.53e-13,23;CL:0000337,2.53e-13,23;CL:0002319,2.68e-13,43;CL:0000221,3.23e-13,44;CL:0000133,3.23e-13,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.81e-29!73;UBERON:0005743!3.81e-29!73;UBERON:0000073!1.26e-27!75;UBERON:0001016!1.26e-27!75;UBERON:0004121!3.65e-23!102;UBERON:0000924!3.65e-23!102;UBERON:0006601!3.65e-23!102;UBERON:0001049!6.71e-22!52;UBERON:0005068!6.71e-22!52;UBERON:0006241!6.71e-22!52;UBERON:0007135!6.71e-22!52;UBERON:0000955!1.88e-20!50;UBERON:0006238!1.88e-20!50;UBERON:0002616!6.53e-20!49;UBERON:0000033!1.09e-19!63;UBERON:0002346!1.34e-19!71;UBERON:0003075!1.34e-19!71;UBERON:0007284!1.34e-19!71;UBERON:0002020!2.01e-18!34;UBERON:0003056!1.64e-16!49;UBERON:0003080!6.30e-16!40;UBERON:0002791!1.72e-15!29;UBERON:0003528!1.72e-15!29;UBERON:0001893!1.72e-15!29;UBERON:0002780!2.98e-15!39;UBERON:0001890!2.98e-15!39;UBERON:0006240!2.98e-15!39;UBERON:0000153!4.34e-14!94;UBERON:0000025!1.02e-13!114;UBERON:0004111!3.21e-12!122;UBERON:0007811!1.58e-11!86;UBERON:0000956!2.14e-11!21;UBERON:0001869!2.14e-11!21;UBERON:0000203!2.14e-11!21;UBERON:0002619!5.96e-09!17;UBERON:0000468!1.32e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.81e-29,73;UBERON:0001016,1.26e-27,75;UBERON:0004121,9.11e-26,95;UBERON:0000924,9.11e-26,95;UBERON:0006601,9.11e-26,95;UBERON:0000073,5.54e-23,54;UBERON:0002346,7.97e-23,64;UBERON:0003075,7.97e-23,64;UBERON:0007284,7.97e-23,64;UBERON:0001049,6.70e-22,52;UBERON:0005068,6.70e-22,52;UBERON:0006241,6.70e-22,52;UBERON:0007135,6.70e-22,52;UBERON:0010371,1.45e-20,73;UBERON:0000955,1.13e-18,47;UBERON:0006238,1.13e-18,47;UBERON:0002020,2.01e-18,34;UBERON:0002616,3.84e-18,46;UBERON:0003056,1.64e-16,49;UBERON:0010314,3.55e-16,92;UBERON:0003080,6.30e-16,40;UBERON:0003528,1.72e-15,29;UBERON:0002791,1.72e-15,29;UBERON:0001893,1.72e-15,29;UBERON:0002780,2.98e-15,39;UBERON:0001890,2.98e-15,39;UBERON:0006240,2.98e-15,39;UBERON:0000025,1.02e-13,114;UBERON:0004111,3.21e-12,122;UBERON:0000956,2.14e-11,21;UBERON:0001869,2.14e-11,21;UBERON:0000203,2.14e-11,21;UBERON:0002619,5.96e-09,17 | |||
|phase1_expression=11.0502704502308,2.44282785347553,2.27499619694768,5.74682001482977,6.01074875935617,2.18243053485457,2.56973904655078,13.2997023144824,1.97104211012333,4.21316147379588,0.856089841127525,0.797721589953364,16.606470803327,14.3369459967156,3.99731714178795,4.04950534779652,2.09868563438444,6.62470547252299,6.30726394586398,6.36584477697045,14.4573593256819,4.56738375524072,3.6567970479451,3.67982572424835,1.83527424853736,2.8711598205751,3.4460959692726,1.50829862880122,2.85035129184561,2.77233142735924,0.886922042621219,3.17515336729816,0.61506478758457,0,2.02196133825892,1.66234645358492,2.45003227514843,7.11503772252743,6.2506827561904,7.32933241563318,7.64700934440319,6.83045484958446,3.88408282424923,18.0032449705076,19.2616169317078,15.6014739337429,18.7773922643529,9.3750817243592,18.8930117151646,13.8045228342741,13.0187372111587,20.125359011096,3.18786951509699,9.42970784614748,10.4189077734164,10.2903774414379,17.7650732762029,13.4074743992135,42.2841403196559,48.667170093027,44.3681982454325,23.3802727127701,22.2323699027785,6.74924787961049,14.8329954385046,5.6838409195688,20.6724076257699,24.2057532352579,45.8308086403471,47.5220902927551,41.854667308925,39.7054868321287,42.6276284036614,39.5645281464302,26.7408864140879,34.9303138911808,42.9451935897616,41.2430102015156,41.7809770456982,38.2470234417562,30.1909223887952,32.8175423450759,38.806436861192,33.2029939918691,33.6156145108982,40.9533733808398,45.5589378557129,45.4814647813733,4.24066682665831,11.7891633766585,14.7830889237856,8.60423876981386,8.83962733820076,10.7940638327563,14.9448576012964,15.2329141613094,8.98844288843212,11.759692257886,8.57293815189467,7.0667914902068,14.2251853974447,15.3991772897181,20.3844191765317,14.2213340630666,3.68034769719064,1.26679932737549,2.02209778005913,11.1900202124679,44.7962538709607,14.398887489288,8.32729568477452,10.6562917409249,8.07154240396205,7.83757730873637,13.9930561491489,10.5559936716927,9.14621380617183,24.4372913194651,9.73071607144862,13.2648816956876,9.71702681225732,7.27312879702833,7.45567044872489,56.5066938232286,44.193255137639,3.0654846625031,3.11519323715393,2.39961092397363,3.04968544975355,49.880282921806,49.8675657072303,49.0051973240171,50.930525816337,40.1473268008619,49.2457665606157,42.831693449888,15.4795833052481,9.57933673697716,4.54900965180614,14.0996043443938,13.5325260681212,9.19608417733892,19.4467100189777,13.7141384230501,22.0438257250302,23.9572656932669,19.021450085625,24.5768202202065,21.1256633074185,22.6927296201383,24.4572062587889,21.0427903130472,16.9608822027615,21.5916343243743,14.8163138213719,14.7285357445685,0,2.05878325691772,2.27330799516474,14.4988040774851,9.85009451920604,9.90341338035582,15.8618972842091,11.8058539048442,13.1127045954272,11.1616293480196,13.6819434713806,12.8441876603886,12.5065485934245,13.2975645904067,13.2142159559745,11.5497990066013,10.3188554186794,14.091673969839,50.0490077582623,46.8215986325744,6.27795687669216,5.55346189993443,10.4511242762265,13.7019636397659,15.0774929746849,9.68080918192044,8.45036566610507,8.94060442729028,5.21981967698963,7.5761519173045,5.02670417600539,6.76452004939913,6.23885078781184,8.98819408654222,6.05186539649144,6.57166201739412,14.035424670528,11.0821057231437,15.7790829942313,11.2008230314923,11.6371492300575,11.1515953625607,14.5444035385792,11.513591542409,12.55989822731,11.4759362447274,11.858105083486,6.34011401721157,2.55526693647164,6.07127703439105,3.44862206360455,5.30589751455317,4.83789118384698,10.0693648107784,6.48540907100142,5.21666685057355,17.2521847832825,10.4199465347181,17.4741096944154,14.6495749209325,10.9432422248366,15.4381926836277,16.4430339248278,11.1799932944586,14.8298128562244,14.5980773766662,14.0814148973101,20.6032696653433,22.6141458841713,17.5620283072019,18.2856767163182,21.4820748959312,20.4102103881583,14.4199716949849,13.8147985492716,18.0811323226889,15.0791283939272,13.053736411649,8.35999264132362,15.452457793065,51.8578405660568,49.8149668016864,10.1639666133539,13.1284882146274,15.1443945319803,15.2271110275689,17.0184484208911,16.4888470587261,20.943075363745,24.6276581786284,23.074209995469,15.7818163272108,26.0889933444706,38.8798792870387,15.1875891172847,14.7794451043822,20.5237568785506,17.9817434040064,14.6019652173959,9.71122544619926,6.65111825322452,10.1846743068185,9.7449624650655,11.3751004739253,8.26970538138308,10.5424781548477,12.4774082434652,10.1131762539461,5.27093042874994,11.3449097573006,18.7241783164583,13.5045820523483,11.2542054890996,12.8602221018955,18.798064766081,16.9450376721967,13.3284706687718,12.178597964584,22.7631556821799,19.9122146611991,6.17479514553893,18.7970328353287,15.1776561094151,13.5704081088351,9.66915986425405,7.2221995887827,9.03590593552537,60.6340737574367,9.91051108627546,11.144890870014,7.22258656741876,5.08594833912666,6.42462870288818,7.32090154260872,5.43930975980337,5.87796099759364,5.11339903076368,5.72802370809068,12.3371037496643,12.6058069618646,11.448566127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| |||
|short_description=p3@Fam168a | |||
}} |
Revision as of 21:53, 3 August 2015
Short description: | p3@Fam168a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Fam168a_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000084914_5end |
EntrezGene: | 319604 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.61e-14 | 33 |
neuronal stem cell | 2.61e-14 | 33 |
neuroblast | 2.61e-14 | 33 |
electrically signaling cell | 2.61e-14 | 33 |
electrically responsive cell | 3.61e-14 | 39 |
electrically active cell | 3.61e-14 | 39 |
CNS neuron (sensu Vertebrata) | 2.53e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.53e-13 | 23 |
neural cell | 2.68e-13 | 43 |
ectodermal cell | 3.23e-13 | 44 |
neurectodermal cell | 3.23e-13 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.81e-29 | 73 |
nervous system | 1.26e-27 | 75 |
ectoderm-derived structure | 9.11e-26 | 95 |
ectoderm | 9.11e-26 | 95 |
presumptive ectoderm | 9.11e-26 | 95 |
regional part of nervous system | 5.54e-23 | 54 |
neurectoderm | 7.97e-23 | 64 |
neural plate | 7.97e-23 | 64 |
presumptive neural plate | 7.97e-23 | 64 |
neural tube | 6.70e-22 | 52 |
neural rod | 6.70e-22 | 52 |
future spinal cord | 6.70e-22 | 52 |
neural keel | 6.70e-22 | 52 |
ecto-epithelium | 1.45e-20 | 73 |
brain | 1.13e-18 | 47 |
future brain | 1.13e-18 | 47 |
gray matter | 2.01e-18 | 34 |
regional part of brain | 3.84e-18 | 46 |
pre-chordal neural plate | 1.64e-16 | 49 |
structure with developmental contribution from neural crest | 3.55e-16 | 92 |
anterior neural tube | 6.30e-16 | 40 |
brain grey matter | 1.72e-15 | 29 |
regional part of telencephalon | 1.72e-15 | 29 |
telencephalon | 1.72e-15 | 29 |
regional part of forebrain | 2.98e-15 | 39 |
forebrain | 2.98e-15 | 39 |
future forebrain | 2.98e-15 | 39 |
tube | 1.02e-13 | 114 |
anatomical conduit | 3.21e-12 | 122 |
cerebral cortex | 2.14e-11 | 21 |
cerebral hemisphere | 2.14e-11 | 21 |
pallium | 2.14e-11 | 21 |
regional part of cerebral cortex | 5.96e-09 | 17 |