FFCP PHASE1:Mm9::chr7:107855120..107855133,+: Difference between revisions
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{{FFCP|EntrezGene=319604|HGNC=|UniProt=Q8BGZ2|association_with_transcript=-31bp_to_ENSMUST00000107042_5end|description=CAGE_peak_6_at_Fam168a_5end|id=chr7:107855120..107855133,+|ontology_enrichment_celltype=CL:0000117!3.24e-07!23;CL:0000337!3.24e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.83e-07,23;CL:0000337,1.83e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.80e-12!52;UBERON:0005068!3.80e-12!52;UBERON:0006241!3.80e-12!52;UBERON:0007135!3.80e-12!52;UBERON:0000955!5.89e-12!50;UBERON:0006238!5.89e-12!50;UBERON:0002616!2.18e-11!49;UBERON:0000033!1.26e-10!63;UBERON:0002020!2.65e-09!34;UBERON:0001017!5.31e-09!73;UBERON:0005743!5.31e-09!73;UBERON:0002346!6.35e-09!71;UBERON:0003075!6.35e-09!71;UBERON:0007284!6.35e-09!71;UBERON:0000073!3.53e-08!75;UBERON:0001016!3.53e-08!75;UBERON:0000153!3.76e-08!94;UBERON:0003080!4.68e-08!40;UBERON:0004121!5.82e-08!102;UBERON:0000924!5.82e-08!102;UBERON:0006601!5.82e-08!102;UBERON:0002791!6.81e-08!29;UBERON:0003528!6.81e-08!29;UBERON:0001893!6.81e-08!29;UBERON:0003056!1.45e-07!49;UBERON:0002780!1.48e-07!39;UBERON:0001890!1.48e-07!39;UBERON:0006240!1.48e-07!39;UBERON:0007811!5.83e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.26e-13,54;UBERON:0001049,1.38e-12,52;UBERON:0005068,1.38e-12,52;UBERON:0006241,1.38e-12,52;UBERON:0007135,1.38e-12,52;UBERON:0000955,5.13e-11,47;UBERON:0006238,5.13e-11,47;UBERON:0002616,1.91e-10,46;UBERON:0002346,4.99e-10,64;UBERON:0003075,4.99e-10,64;UBERON:0007284,4.99e-10,64;UBERON:0010371,9.61e-10,73;UBERON:0002020,1.28e-09,34;UBERON:0001017,2.18e-09,73;UBERON:0010314,4.38e-09,92;UBERON:0004121,1.42e-08,95;UBERON:0000924,1.42e-08,95;UBERON:0006601,1.42e-08,95;UBERON:0001016,1.76e-08,75;UBERON:0003080,2.54e-08,40;UBERON:0003528,3.78e-08,29;UBERON:0002791,3.78e-08,29;UBERON:0001893,3.78e-08,29;UBERON:0002780,8.46e-08,39;UBERON:0001890,8.46e-08,39;UBERON:0006240,8.46e-08,39;UBERON:0003056,1.15e-07,49;UBERON:0000025,8.93e-07,114|phase1_expression=0.320297694209588,0,0.909998478779072,0.60492842261366,1.50268718983904,1.17515490338323,0.700837921786577,0.258246646883153,0.140788722151667,0,0,0,0.856003649656029,0.786783621770977,0.666219523631325,0.607425802169478,0.699561878128147,1.73504190947031,1.50825876966313,0,1.36069264241712,0.794327609607082,0.261199789138935,0.47997726838022,0.68822784320151,0,0.430761996159075,0.430942465371778,0.190023419456374,0.504060259519861,0,0,1.84519436275371,0,1.1554064790051,1.16364251750945,1.02084678131185,0.418531630736908,0.7813353445238,1.57057123192139,2.94115744015507,1.36609096991689,0,0,0.811015449756117,0.550640256485045,2.34717403304412,1.09012578190223,0.439372365468944,1.74986909166855,1.67983705950435,2.87505128729943,1.00669563634642,0.725362142011344,1.00828139742739,0,0.286533439938757,0,2.63011399117477,4.23192783417626,1.26766280701236,2.03306719241479,0,0,0,0.7104801149461,1.19840044207362,0.384218305321555,2.07379224616955,2.43010688997043,1.68259969081106,3.99911378165325,2.42955395046775,2.20483438586917,1.91690942036473,1.83843757322004,2.20231761998777,3.19218345212969,4.6081959976873,3.82470234417562,4.02545631850602,2.08365348222704,3.07101298901519,1.68828783009504,2.13917546887534,2.65165726926301,2.84743361598206,1.3047961207771,0.151452386666368,0.906858721281426,0.869593466105033,0.860423876981386,0,0,1.94932925234301,0.448026887097336,0.983110940922263,0.852151612890289,0.259786004602869,0.35333957451034,1.12674735821344,0,2.54805239706646,0,0.216491041011214,0.760079596425296,0.505524445014783,1.02765491747154,4.40194402200192,2.07818994690755,0.867426633830679,0.304465478312141,1.38369298353635,1.05505848386836,2.11659672844269,1.63366568728578,0,6.07317299063629,0,2.10296904931632,1.98757366614354,1.45462575940567,5.59175283654366,5.85561594023094,3.14170060220183,2.04365644166873,1.1981512450592,0.599902730993408,0.635351135365324,4.6435098215495,5.49000723382352,3.01570445070875,5.9100268865374,3.06858548796397,2.0778804455956,3.40706652442291,1.2220723662038,1.99051152976149,3.79084137650512,1.89397670297827,0.780722657776222,0.689706313300419,1.98068342785884,1.05493372485001,2.65342346690179,1.2811372028485,1.3118241438362,3.62184719034622,1.29340795759705,2.08016688184601,2.11141348996739,1.7535658594206,1.39023624612799,2.78601733217733,1.85203922767149,1.19420560091096,0.702213187313235,0.772043721344145,0.568326998791185,0.828503090142008,1.17263029990548,2.34080679899319,1.65721314909647,1.37734962223183,2.00547246753592,1.86027155800326,1.60964040839772,1.86824547787471,2.79751744852917,1.64167464079095,2.02672023864639,2.33919979880532,3.07370161407471,2.14730270016595,5.46753866266731,3.08713837137853,1.98251269790279,2.64450566663544,0.639864751605702,0.928946687441754,0.902072229254653,1.61346819698674,2.44615848229357,2.09248188723815,2.37264530772256,0.494096864172033,1.25667604400135,1.79060824837036,1.16978452271472,0,1.08069024937347,1.1948476395262,0.379335801906163,1.48523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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319604 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BGZ2 | |||
|association_with_transcript=-31bp_to_ENSMUST00000107042_5end | |||
|cluster_id=chr7:107855120..107855133,+ | |||
|description=CAGE_peak_6_at_Fam168a_5end | |||
|id=chr7:107855120..107855133,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.24e-07!23;CL:0000337!3.24e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.83e-07,23;CL:0000337,1.83e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.80e-12!52;UBERON:0005068!3.80e-12!52;UBERON:0006241!3.80e-12!52;UBERON:0007135!3.80e-12!52;UBERON:0000955!5.89e-12!50;UBERON:0006238!5.89e-12!50;UBERON:0002616!2.18e-11!49;UBERON:0000033!1.26e-10!63;UBERON:0002020!2.65e-09!34;UBERON:0001017!5.31e-09!73;UBERON:0005743!5.31e-09!73;UBERON:0002346!6.35e-09!71;UBERON:0003075!6.35e-09!71;UBERON:0007284!6.35e-09!71;UBERON:0000073!3.53e-08!75;UBERON:0001016!3.53e-08!75;UBERON:0000153!3.76e-08!94;UBERON:0003080!4.68e-08!40;UBERON:0004121!5.82e-08!102;UBERON:0000924!5.82e-08!102;UBERON:0006601!5.82e-08!102;UBERON:0002791!6.81e-08!29;UBERON:0003528!6.81e-08!29;UBERON:0001893!6.81e-08!29;UBERON:0003056!1.45e-07!49;UBERON:0002780!1.48e-07!39;UBERON:0001890!1.48e-07!39;UBERON:0006240!1.48e-07!39;UBERON:0007811!5.83e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.26e-13,54;UBERON:0001049,1.38e-12,52;UBERON:0005068,1.38e-12,52;UBERON:0006241,1.38e-12,52;UBERON:0007135,1.38e-12,52;UBERON:0000955,5.13e-11,47;UBERON:0006238,5.13e-11,47;UBERON:0002616,1.91e-10,46;UBERON:0002346,4.99e-10,64;UBERON:0003075,4.99e-10,64;UBERON:0007284,4.99e-10,64;UBERON:0010371,9.61e-10,73;UBERON:0002020,1.28e-09,34;UBERON:0001017,2.18e-09,73;UBERON:0010314,4.38e-09,92;UBERON:0004121,1.42e-08,95;UBERON:0000924,1.42e-08,95;UBERON:0006601,1.42e-08,95;UBERON:0001016,1.76e-08,75;UBERON:0003080,2.54e-08,40;UBERON:0003528,3.78e-08,29;UBERON:0002791,3.78e-08,29;UBERON:0001893,3.78e-08,29;UBERON:0002780,8.46e-08,39;UBERON:0001890,8.46e-08,39;UBERON:0006240,8.46e-08,39;UBERON:0003056,1.15e-07,49;UBERON:0000025,8.93e-07,114 | |||
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| |||
|short_description=p6@Fam168a | |||
}} |
Revision as of 21:52, 3 August 2015
Short description: | p6@Fam168a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fam168a_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENSMUST00000107042_5end |
EntrezGene: | 319604 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.83e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.83e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.26e-13 | 54 |
neural tube | 1.38e-12 | 52 |
neural rod | 1.38e-12 | 52 |
future spinal cord | 1.38e-12 | 52 |
neural keel | 1.38e-12 | 52 |
brain | 5.13e-11 | 47 |
future brain | 5.13e-11 | 47 |
regional part of brain | 1.91e-10 | 46 |
neurectoderm | 4.99e-10 | 64 |
neural plate | 4.99e-10 | 64 |
presumptive neural plate | 4.99e-10 | 64 |
ecto-epithelium | 9.61e-10 | 73 |
gray matter | 1.28e-09 | 34 |
central nervous system | 2.18e-09 | 73 |
structure with developmental contribution from neural crest | 4.38e-09 | 92 |
ectoderm-derived structure | 1.42e-08 | 95 |
ectoderm | 1.42e-08 | 95 |
presumptive ectoderm | 1.42e-08 | 95 |
nervous system | 1.76e-08 | 75 |
anterior neural tube | 2.54e-08 | 40 |
brain grey matter | 3.78e-08 | 29 |
regional part of telencephalon | 3.78e-08 | 29 |
telencephalon | 3.78e-08 | 29 |
regional part of forebrain | 8.46e-08 | 39 |
forebrain | 8.46e-08 | 39 |
future forebrain | 8.46e-08 | 39 |
pre-chordal neural plate | 1.15e-07 | 49 |
tube | 8.93e-07 | 114 |