FFCP PHASE1:Mm9::chr7:106683949..106684008,+: Difference between revisions
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{{FFCP|EntrezGene=109689|HGNC=|UniProt=Q8BWG8|association_with_transcript=0bp_to_ENSMUST00000098266,NM_177231,NM_178220,uc009ilu.1,uc009ilv.1_5end|description=CAGE_peak_3_at_Arrb1_5end|id=chr7:106683949..106684008,+|ontology_enrichment_celltype=CL:0000117!1.36e-07!23;CL:0000337!1.36e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-07,23;CL:0000337,1.36e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!6.21e-11!50;UBERON:0006238!6.21e-11!50;UBERON:0002616!2.17e-10!49;UBERON:0001017!3.19e-10!73;UBERON:0005743!3.19e-10!73;UBERON:0002020!4.61e-10!34;UBERON:0001049!4.84e-10!52;UBERON:0005068!4.84e-10!52;UBERON:0006241!4.84e-10!52;UBERON:0007135!4.84e-10!52;UBERON:0000033!5.07e-10!63;UBERON:0002791!9.91e-10!29;UBERON:0003528!9.91e-10!29;UBERON:0001893!9.91e-10!29;UBERON:0000073!5.10e-09!75;UBERON:0001016!5.10e-09!75;UBERON:0003056!5.98e-09!49;UBERON:0003080!8.46e-09!40;UBERON:0002346!1.97e-08!71;UBERON:0003075!1.97e-08!71;UBERON:0007284!1.97e-08!71;UBERON:0002780!3.04e-08!39;UBERON:0001890!3.04e-08!39;UBERON:0006240!3.04e-08!39;UBERON:0002048!3.08e-07!14;UBERON:0000117!3.08e-07!14;UBERON:0000171!3.08e-07!14;UBERON:0000170!3.08e-07!14;UBERON:0005597!3.08e-07!14;UBERON:0000118!3.08e-07!14;UBERON:0005153!9.21e-07!17;UBERON:0004121!9.85e-07!102;UBERON:0000924!9.85e-07!102;UBERON:0006601!9.85e-07!102;UBERON:0000956!9.87e-07!21;UBERON:0001869!9.87e-07!21;UBERON:0000203!9.87e-07!21|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.25e-11,54;UBERON:0001017,3.19e-10,73;UBERON:0002020,4.61e-10,34;UBERON:0001049,4.84e-10,52;UBERON:0005068,4.84e-10,52;UBERON:0006241,4.84e-10,52;UBERON:0007135,4.84e-10,52;UBERON:0003528,9.91e-10,29;UBERON:0002791,9.91e-10,29;UBERON:0001893,9.91e-10,29;UBERON:0000955,1.31e-09,47;UBERON:0006238,1.31e-09,47;UBERON:0002346,1.53e-09,64;UBERON:0003075,1.53e-09,64;UBERON:0007284,1.53e-09,64;UBERON:0002616,4.35e-09,46;UBERON:0001016,5.29e-09,75;UBERON:0003056,5.97e-09,49;UBERON:0003080,8.46e-09,40;UBERON:0002780,3.04e-08,39;UBERON:0001890,3.04e-08,39;UBERON:0006240,3.04e-08,39;UBERON:0004121,2.31e-07,95;UBERON:0000924,2.31e-07,95;UBERON:0006601,2.31e-07,95;UBERON:0002048,3.08e-07,14;UBERON:0000117,3.08e-07,14;UBERON:0000171,3.08e-07,14;UBERON:0000170,3.08e-07,14;UBERON:0005597,3.08e-07,14;UBERON:0000118,3.08e-07,14;UBERON:0005153,9.21e-07,17;UBERON:0000956,9.87e-07,21;UBERON:0001869,9.87e-07,21;UBERON:0000203,9.87e-07,21|phase1_expression=3.20297694209588,5.23463111459042,4.54999239389536,9.0739263392049,11.0197060588196,4.70061961353291,4.67225281191051,5.93967287831251,1.40788722151667,0.468129052643987,0.171217968225505,0.159544317990673,6.33442700745461,6.03200776691082,7.32841475994458,8.50396123037269,7.69518065940961,6.30924330716475,8.5010948835558,4.66828616977833,6.63337663178344,5.65958421845046,5.48519557191764,5.91971964335605,3.67054849707472,2.8711598205751,2.15380998079537,3.23206849028834,3.99049180858385,5.04060259519861,2.21730510655305,34.2916563668201,36.9038872550742,15.8481681015439,6.06588401477677,6.4831511689812,7.55426618170766,11.3003540298965,5.4693474116666,8.89990364755457,9.99993529652724,12.9778642142105,7.2826552954673,2.01434908760924,2.12891555560981,2.20256102594018,2.34717403304412,1.30815093828268,3.29529274101708,2.3331587888914,3.91961980551015,1.43752564364972,4.86569557567435,5.07753499407941,3.6970317905671,1.02903774414379,4.29800159908135,1.54701627683233,11.9366711907163,8.99284664762456,13.3104594736298,4.40497891689872,0,6.74924787961049,8.89979726310277,4.9733608046227,6.2916023208865,4.61061966385865,10.0578923939223,11.8805225731888,9.04397333810943,11.1403883917483,6.62605622854841,6.61450315760752,8.24271050756833,7.35375029288017,12.1127469099328,11.1087984134113,12.9029487935245,11.0784481693363,9.97215315266265,8.33461392890816,9.77140496504833,13.5063026407603,13.2934475565825,7.07108605136802,7.11858403995515,7.26957838718672,0.605809546665472,2.19157524309678,10.4351215932604,2.58127163094416,0,0,0,0.448026887097336,3.23022166303029,2.72688516124892,4.1565760736459,3.88673531961374,3.80277233397037,1.28326477414318,0,0,0.432982082022428,0.253359865475099,1.01104889002957,3.65388415100992,7.50919862576798,6.97678053604676,5.89850111004862,2.74018930480927,6.45723392316964,4.37095657602605,6.58496759959947,5.52933001850572,5.6854842578906,4.77177877835708,10.6153266233985,7.117741397686,6.62524555381181,4.363877278217,5.59175283654366,13.1751358655196,9.84399522023239,7.40825460104915,4.55297473122497,2.39961092397363,5.20987930999565,23.5171303865572,19.6725259212009,7.53926112677186,17.5562563394199,12.0186264945255,15.584103341967,13.4660248346239,8.04530974417499,5.22509276562391,2.52722758433675,4.8401626853889,3.3831315170303,5.0578462975364,7.92273371143537,6.32960234910003,10.6136938676071,9.09607414022434,11.5253121208466,9.05461797586555,7.11374376678379,7.18603104637713,7.03804496655795,3.72632745126877,4.72680323683516,2.78601733217733,5.76189981942242,7.36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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:109689 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BWG8 | |||
|association_with_transcript=0bp_to_ENSMUST00000098266,NM_177231,NM_178220,uc009ilu.1,uc009ilv.1_5end | |||
|cluster_id=chr7:106683949..106684008,+ | |||
|description=CAGE_peak_3_at_Arrb1_5end | |||
|id=chr7:106683949..106684008,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.36e-07!23;CL:0000337!1.36e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.36e-07,23;CL:0000337,1.36e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!6.21e-11!50;UBERON:0006238!6.21e-11!50;UBERON:0002616!2.17e-10!49;UBERON:0001017!3.19e-10!73;UBERON:0005743!3.19e-10!73;UBERON:0002020!4.61e-10!34;UBERON:0001049!4.84e-10!52;UBERON:0005068!4.84e-10!52;UBERON:0006241!4.84e-10!52;UBERON:0007135!4.84e-10!52;UBERON:0000033!5.07e-10!63;UBERON:0002791!9.91e-10!29;UBERON:0003528!9.91e-10!29;UBERON:0001893!9.91e-10!29;UBERON:0000073!5.10e-09!75;UBERON:0001016!5.10e-09!75;UBERON:0003056!5.98e-09!49;UBERON:0003080!8.46e-09!40;UBERON:0002346!1.97e-08!71;UBERON:0003075!1.97e-08!71;UBERON:0007284!1.97e-08!71;UBERON:0002780!3.04e-08!39;UBERON:0001890!3.04e-08!39;UBERON:0006240!3.04e-08!39;UBERON:0002048!3.08e-07!14;UBERON:0000117!3.08e-07!14;UBERON:0000171!3.08e-07!14;UBERON:0000170!3.08e-07!14;UBERON:0005597!3.08e-07!14;UBERON:0000118!3.08e-07!14;UBERON:0005153!9.21e-07!17;UBERON:0004121!9.85e-07!102;UBERON:0000924!9.85e-07!102;UBERON:0006601!9.85e-07!102;UBERON:0000956!9.87e-07!21;UBERON:0001869!9.87e-07!21;UBERON:0000203!9.87e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.25e-11,54;UBERON:0001017,3.19e-10,73;UBERON:0002020,4.61e-10,34;UBERON:0001049,4.84e-10,52;UBERON:0005068,4.84e-10,52;UBERON:0006241,4.84e-10,52;UBERON:0007135,4.84e-10,52;UBERON:0003528,9.91e-10,29;UBERON:0002791,9.91e-10,29;UBERON:0001893,9.91e-10,29;UBERON:0000955,1.31e-09,47;UBERON:0006238,1.31e-09,47;UBERON:0002346,1.53e-09,64;UBERON:0003075,1.53e-09,64;UBERON:0007284,1.53e-09,64;UBERON:0002616,4.35e-09,46;UBERON:0001016,5.29e-09,75;UBERON:0003056,5.97e-09,49;UBERON:0003080,8.46e-09,40;UBERON:0002780,3.04e-08,39;UBERON:0001890,3.04e-08,39;UBERON:0006240,3.04e-08,39;UBERON:0004121,2.31e-07,95;UBERON:0000924,2.31e-07,95;UBERON:0006601,2.31e-07,95;UBERON:0002048,3.08e-07,14;UBERON:0000117,3.08e-07,14;UBERON:0000171,3.08e-07,14;UBERON:0000170,3.08e-07,14;UBERON:0005597,3.08e-07,14;UBERON:0000118,3.08e-07,14;UBERON:0005153,9.21e-07,17;UBERON:0000956,9.87e-07,21;UBERON:0001869,9.87e-07,21;UBERON:0000203,9.87e-07,21 | |||
|phase1_expression=3.20297694209588,5.23463111459042,4.54999239389536,9.0739263392049,11.0197060588196,4.70061961353291,4.67225281191051,5.93967287831251,1.40788722151667,0.468129052643987,0.171217968225505,0.159544317990673,6.33442700745461,6.03200776691082,7.32841475994458,8.50396123037269,7.69518065940961,6.30924330716475,8.5010948835558,4.66828616977833,6.63337663178344,5.65958421845046,5.48519557191764,5.91971964335605,3.67054849707472,2.8711598205751,2.15380998079537,3.23206849028834,3.99049180858385,5.04060259519861,2.21730510655305,34.2916563668201,36.9038872550742,15.8481681015439,6.06588401477677,6.4831511689812,7.55426618170766,11.3003540298965,5.4693474116666,8.89990364755457,9.99993529652724,12.9778642142105,7.2826552954673,2.01434908760924,2.12891555560981,2.20256102594018,2.34717403304412,1.30815093828268,3.29529274101708,2.3331587888914,3.91961980551015,1.43752564364972,4.86569557567435,5.07753499407941,3.6970317905671,1.02903774414379,4.29800159908135,1.54701627683233,11.9366711907163,8.99284664762456,13.3104594736298,4.40497891689872,0,6.74924787961049,8.89979726310277,4.9733608046227,6.2916023208865,4.61061966385865,10.0578923939223,11.8805225731888,9.04397333810943,11.1403883917483,6.62605622854841,6.61450315760752,8.24271050756833,7.35375029288017,12.1127469099328,11.1087984134113,12.9029487935245,11.0784481693363,9.97215315266265,8.33461392890816,9.77140496504833,13.5063026407603,13.2934475565825,7.07108605136802,7.11858403995515,7.26957838718672,0.605809546665472,2.19157524309678,10.4351215932604,2.58127163094416,0,0,0,0.448026887097336,3.23022166303029,2.72688516124892,4.1565760736459,3.88673531961374,3.80277233397037,1.28326477414318,0,0,0.432982082022428,0.253359865475099,1.01104889002957,3.65388415100992,7.50919862576798,6.97678053604676,5.89850111004862,2.74018930480927,6.45723392316964,4.37095657602605,6.58496759959947,5.52933001850572,5.6854842578906,4.77177877835708,10.6153266233985,7.117741397686,6.62524555381181,4.363877278217,5.59175283654366,13.1751358655196,9.84399522023239,7.40825460104915,4.55297473122497,2.39961092397363,5.20987930999565,23.5171303865572,19.6725259212009,7.53926112677186,17.5562563394199,12.0186264945255,15.584103341967,13.4660248346239,8.04530974417499,5.22509276562391,2.52722758433675,4.8401626853889,3.3831315170303,5.0578462975364,7.92273371143537,6.32960234910003,10.6136938676071,9.09607414022434,11.5253121208466,9.05461797586555,7.11374376678379,7.18603104637713,7.03804496655795,3.72632745126877,4.72680323683516,2.78601733217733,5.76189981942242,7.36426787228425,4.91549231119264,3.08817488537658,4.83077948972507,6.62802472113606,5.15957331958412,5.94204802821349,6.39210786080068,3.93528463494808,5.86215028972037,4.41814495025775,7.51165523918934,7.35621656913168,3.62031669809657,3.61168420974009,2.51313309592153,3.65499968563331,4.83010253640311,5.36825675041487,13.4585567081041,14.7153595702377,4.29544417878937,6.34681359992506,10.024547775156,8.59275685883622,9.02072229254653,8.0673409849337,7.11609740303585,4.56541502670142,7.59246498471219,4.11747386810027,8.54539709920916,9.94782360205754,6.82374304916921,5.39291645192533,9.51007419448655,9.16049856970089,7.39704813717019,5.71242563048644,5.63538678365402,7.73875045812194,8.14600446104028,7.08371780892217,9.54871710576285,6.19962621514329,5.33795674660674,6.91024117962083,1.48226313543574,8.67594549723689,10.0245087507734,7.87017393346988,7.30296436998611,6.51178331331525,3.8193877767213,4.60313819921297,5.5125977103512,5.49122826376163,7.18841032636773,5.20997326735905,2.49630138491648,1.76805214562978,1.61457672169721,2.8946611281802,12.9327233116623,8.14813070613084,11.2445833744998,8.14776411720903,8.91822943496308,9.88286918906713,15.9489239393629,9.36641509717434,16.3940549870439,18.1601045511995,12.9158362612565,12.7813385478276,10.3610989119537,12.8737662137545,3.01582567878545,4.35124547054968,3.93411418415229,8.55403913544671,14.6101036888891,13.9481907044722,0.819674726883377,3.28212205365685,6.62567260774139,2.73307121007647,5.60100834105277,6.4521575447189,8.46634961513098,8.77537245445381,6.47697122679831,6.42962887404886,5.92931666919785,15.7447445046685,7.66476460124651,5.1639025063504,8.1443479676788,10.7230579932148,6.63725691699814,2.91336763385978,1.209294227859,2.07465587731488,2.36241514304618,4.61152721915891,5.42699415653264,4.72593848320757,3.92147116223193,3.47640433729398,2.10837217149998,3.09406629744561,2.7235168460303,3.96134406868882,7.37344497561701,5.14408884075822,4.96552654198366,6.42127743367454,4.44282355625727,8.82948352432338,5.86679270159276,15.2519091021951,8.60060752414351,4.28704257647848,5.16686165426898,3.25689794612042,2.86493625607528,3.28281799490123,8.74442509889552,11.6817940266621,7.68918963590337,9.28740905834501,12.5932278611404,8.4765805652111,8.61173634642459,6.86334519619568,6.11922347977879,6.71766971153558,4.97519905695926,4.77335309007557,10.7554237817586,6.30290348093231,5.61627772273367,5.01811910434725,5.45906409365444,7.0129460120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| |||
|short_description=p3@Arrb1 | |||
}} |
Revision as of 20:52, 3 August 2015
Short description: | p3@Arrb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arrb1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000098266, NM_177231, NM_178220, uc009ilu.1, uc009ilv.1_5end |
EntrezGene: | 109689 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.36e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.36e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 6.25e-11 | 54 |
central nervous system | 3.19e-10 | 73 |
gray matter | 4.61e-10 | 34 |
neural tube | 4.84e-10 | 52 |
neural rod | 4.84e-10 | 52 |
future spinal cord | 4.84e-10 | 52 |
neural keel | 4.84e-10 | 52 |
brain grey matter | 9.91e-10 | 29 |
regional part of telencephalon | 9.91e-10 | 29 |
telencephalon | 9.91e-10 | 29 |
brain | 1.31e-09 | 47 |
future brain | 1.31e-09 | 47 |
neurectoderm | 1.53e-09 | 64 |
neural plate | 1.53e-09 | 64 |
presumptive neural plate | 1.53e-09 | 64 |
regional part of brain | 4.35e-09 | 46 |
nervous system | 5.29e-09 | 75 |
pre-chordal neural plate | 5.97e-09 | 49 |
anterior neural tube | 8.46e-09 | 40 |
regional part of forebrain | 3.04e-08 | 39 |
forebrain | 3.04e-08 | 39 |
future forebrain | 3.04e-08 | 39 |
ectoderm-derived structure | 2.31e-07 | 95 |
ectoderm | 2.31e-07 | 95 |
presumptive ectoderm | 2.31e-07 | 95 |
lung | 3.08e-07 | 14 |
respiratory tube | 3.08e-07 | 14 |
respiration organ | 3.08e-07 | 14 |
pair of lungs | 3.08e-07 | 14 |
lung primordium | 3.08e-07 | 14 |
lung bud | 3.08e-07 | 14 |
epithelial bud | 9.21e-07 | 17 |
cerebral cortex | 9.87e-07 | 21 |
cerebral hemisphere | 9.87e-07 | 21 |
pallium | 9.87e-07 | 21 |