FFCP PHASE1:Hg19::chrX:134167019..134167068,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8933 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=2569 | |||
|TSSclassifier=weak | |||
|UniProt=O15255 | |||
|association_with_transcript=288bp_to_CR456853,D88756,DQ891384,EU176632_5end | |||
|description=CAGE_peak_5_at_FAM127A_5end | |||
|id=chrX:134167019..134167068,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.04e-15!180;CL:0000183!1.31e-12!59;CL:0000680!1.21e-11!57;CL:0000056!1.21e-11!57;CL:0000355!1.21e-11!57;CL:0000187!9.50e-11!54;CL:0000222!1.42e-09!119;CL:0000393!1.57e-09!60;CL:0000211!1.57e-09!60;CL:0000192!1.96e-09!42;CL:0000514!1.96e-09!42 | |||
|ontology_enrichment_celltype_v019=CL:0000192;3.91e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,4.03e-11,58;CL:0000056,4.03e-11,58;CL:0000355,4.03e-11,58;CL:0000192,2.87e-10,43;CL:0000514,2.87e-10,43;CL:0000187,5.05e-10,55;CL:0000222,3.31e-08,121;CL:0000393,7.42e-08,61;CL:0000211,7.42e-08,61;CL:0002334,4.76e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000514;3.91e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.94e-18!365;UBERON:0000468!9.51e-15!659;UBERON:0000119!3.10e-14!312;UBERON:0000914!9.01e-14!83;UBERON:0002329!9.01e-14!83;UBERON:0003077!9.01e-14!83;UBERON:0003059!9.01e-14!83;UBERON:0007282!9.01e-14!83;UBERON:0009618!9.01e-14!83;UBERON:0007285!9.01e-14!83;UBERON:0000483!1.02e-13!309;UBERON:0000481!2.59e-13!347;UBERON:0001134!2.68e-13!61;UBERON:0002036!2.68e-13!61;UBERON:0003082!2.68e-13!61;UBERON:0002385!3.55e-13!63;UBERON:0001015!3.55e-13!63;UBERON:0000383!3.55e-13!63;UBERON:0004290!6.35e-13!70;UBERON:0000486!3.71e-12!82;UBERON:0000477!4.14e-12!286;UBERON:0000467!4.68e-11!625;UBERON:0000480!8.46e-11!626;UBERON:0000922!3.98e-10!612;UBERON:0005256!4.92e-10!143;UBERON:0004111!5.97e-10!241;UBERON:0002616!8.77e-10!59;UBERON:0002050!1.81e-09!605;UBERON:0005423!1.81e-09!605;UBERON:0000923!2.92e-09!604;UBERON:0005291!2.92e-09!604;UBERON:0006598!2.92e-09!604;UBERON:0002532!2.92e-09!604;UBERON:0001049!5.33e-09!57;UBERON:0005068!5.33e-09!57;UBERON:0006241!5.33e-09!57;UBERON:0007135!5.33e-09!57;UBERON:0000025!6.18e-09!194;UBERON:0002100!2.62e-08!216;UBERON:0000955!1.21e-07!69;UBERON:0006238!1.21e-07!69;UBERON:0005743!1.46e-07!86;UBERON:0003075!1.47e-07!86;UBERON:0007284!1.47e-07!86;UBERON:0001017!1.92e-07!82;UBERON:0002049!2.55e-07!79;UBERON:0007798!2.55e-07!79;UBERON:0002346!3.02e-07!90;UBERON:0000064!4.63e-07!219;UBERON:0004872!6.13e-07!84;UBERON:0000033!8.33e-07!123 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,4.02e-14,78;UBERON:0007524,9.11e-14,73;UBERON:0003077,3.86e-13,72;UBERON:0007285,3.86e-13,72;UBERON:0001134,3.94e-13,62;UBERON:0002036,3.94e-13,62;UBERON:0003082,3.94e-13,62;UBERON:0002329,6.32e-13,71;UBERON:0003059,6.32e-13,71;UBERON:0007282,6.32e-13,71;UBERON:0004290,6.32e-13,71;UBERON:0009618,6.32e-13,71;UBERON:0002385,3.11e-12,64;UBERON:0001015,3.11e-12,64;UBERON:0000383,3.11e-12,64;UBERON:0000486,6.91e-11,83;UBERON:0000119,7.28e-11,309;UBERON:0000483,1.39e-10,306;UBERON:0005256,2.69e-10,122;UBERON:0003104,2.61e-09,160;UBERON:0009142,2.61e-09,160;UBERON:0004111,1.76e-07,240;UBERON:0001049,7.03e-07,56;UBERON:0005068,7.03e-07,56;UBERON:0006241,7.03e-07,56;UBERON:0007135,7.03e-07,56 | |||
|phase1_expression=2.72517568905835,2.99740733447376,2.96004248601539,1.0007329835313,3.5756887554183,0.872338524100369,12.6649939084155,3.79031924056099,2.08948502559871,0.737201809504527,1.39560233594486,0.655324116390517,1.84636884759917,1.60896258848061,2.65117900582333,4.03395087871065,2.41077811209591,1.46062018077475,0.975865597581014,1.84681587115182,1.63200552995402,1.56727360739044,0.572471974262113,0.821246550437305,2.38531015230125,0,0,0.0787107813136792,0.393364276848904,0,0,0,0.30120591877825,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0.768482119587302,0.47296445977717,0,0,0,0.376484679085209,0,0,0.918251677112708,0.320929027076094,0,0.329851300186716,0,0,0,1.13477044938228,0,0.502497330513487,0.521482918420201,0.217188844705117,1.21079900526674,0,0.632924774881769,0.211255286311942,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0.79566670879636,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0,0,0.334372990781356,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.895037932904712,0,0,2.60723734129483,1.5905718941022,0.486634870302636,0.945348171640679,1.55210578223795,1.05401742831751,0.261958150995425,0,0.370784442784429,0.649094787309367,0.348259474598534,0.398873881556595,0.238490624305342,0,0,0,0,0.347140501607594,1.13061588384802,2.51699661725944,1.6507082516404,0.626984899610432,0.775250277507987,0.35576626268671,0.33472061276467,1.61131726843659,1.52054421143703,1.70843440283719,0.367663080345869,4.0507097394088,0.446498641420399,0,0.900891843866578,0,0.949265659568129,0.732806975721629,0,0,0.436094052142534,1.49091585508596,2.27934920996244,1.05927344650575,0.860509862246441,0.709336764396714,2.80338800071154,1.06748995729705,5.92002116201184,0.311211035399766,0.808264032418128,0.817309515567294,1.81628913173918,3.45705554687999,0,2.80944069147288,0,3.28787097213962,0.939475989150119,0.161872944368132,0.561803226808994,1.42907919878425,0.491337269247072,1.54988671763648,1.18800285728205,1.97813543422845,0,5.03032699271367,0.168336113954066,0.875829639103749,0.554128230968366,0,2.45190236639216,1.35214253015937,0.794025282120147,0.538168907066586,1.49490172172997,0.847727604638247,0.600182192168805,1.23663035086127,0.772921620136887,1.11670113798954,0.675105328965065,0.876933046450788,0.757301322732344,0.460249493211497,1.45481451136931,1.42003837006646,1.71278566986988,0.847802961552438,0.773043412653187,0.545492241181669,0.573609190778008,0.487894824518382,0.397589304964456,0.69716365721711,0.725627385107593,2.01856680700503,1.45990943630332,1.56449532329816,5.14592750554308,0,2.3218396401599,2.88751792667834,0.709840800239063,1.18009283054671,0.964044119533928,1.43382164552112,0.435758888184812,0.474541238222193,1.07865046528132,1.56977172100277,1.15424147083917,1.4763109092493,2.80483547606892,1.6462960453256,0,0,0,0,0,0.245976877086227,1.02940686179115,1.97550513735526,0,0.402115889646523,0.277765335475589,0.325808305310325,0,1.44331342025273,1.04337364477569,0.70445216541493,1.15493158208859,1.38895653772983,1.52203321787679,0.790204397959275,0,0,0.234004265139238,1.18904929830983,0.93733833986777,1.34385702559088,0.850650583454319,0.0895585227028483,0.290633938513962,0,1.47798971368783,0.176096868026452,0.414656231081544,1.00883967391873,0.75745460055828,0.317489471460845,6.11181480893244,1.17217447210047,3.4214489204541,1.02827492703324,1.20137223137567,3.42991719156694,1.23344192779897,2.1798003441664,0.95339771567235,0.775630294546667,14.3062578340753,1.690605505112,2.39344304926383,3.12022310734098,1.54324424557285,1.41849132023278,2.1313774321288,1.14382394926518,3.25572963234866,4.11620168390384,0.325736184293735,0.710783897485092,0.791951872933429,0.904318131178758,0.871533458600294,0.99972991182057,0,0,0,0.958499421966331,0,2.85273810081437,2.17171960001369,2.26023954805422,1.43248770591916,0,0.197030760201927,0,0.128343036279748,5.08189248444927,0,0,0.502548796003046,0.637938751653163,0.749007023947182,0,0.414415513436035,1.47229790062968,3.00102312635806,2.17012018959788,2.49565033836969,5.35286966391485,2.52323864054295,1.40569697991256,1.20378439891088,6.82222512167955,6.2083842775503,0,1.84369168541703,2.17209036170207,3.52442083432933,2.74514739048685,0,0.215714200818617,0,0,1.66435439510497,1.81434175997808,1.98486246255021,1.07423381301644,3.36792113319688,1.92208723883551,3.07024349440022,1.60853921143608,2.96836132889982,2.46735510084249,1.77561725313127,1.23190734020714,5.19254429183621,1.85936605535935,0.604297247958111,3.40860999515584,0.552485933615378,1.37777337797528,2.00300284807389,5.37610101333639,0.451199612907412,1.23224539367064,0.784349769176855,4.38417673959782,0.527758144464379,0,2.2112181685947,0.431831832204279,4.62681758070868,1.08378575017541,6.02027728625824,0,0,0.447749509444357,0,0,0.256450125116389,1.96808787419823,0.976135183992909,0.309123034943167,0.366277859273374,0.495056999523528,0,2.60024098414608,8.03419649220798,1.93341436584244,0.924291702687866,0.767518373630648,0.413509717453592,0.751941714077915,1.45016693914229,0.511359764496605,2.04773681987496,0.661139661443912,0.960950336825531,0.510450849978337,0.30347334256665,8.36721988735114,4.09256050879832,0.6970372701606,0.924100740528266,0.532306030317022,0,2.96518750566272,0.572499546967965,0.744316738719335,1.58189712359363,2.2875623270859,3.32667128704734,3.85145089230528,1.27281299170375,7.8494864019923,1.43897966066652,1.09814811894422,2.00281083987667,2.22400729730648,0,2.52755073743389,1.95053495635836,1.70599442741899,1.05650146756755,1.22849920267187,2.82810863907426,2.26016233240486,2.75682671773062,3.98063385144732,4.82295973779139,3.47265320560013,6.55894752046633,1.21746226177622,2.78841148289775,1.12678241012897,0.573645408816206,0.785992328104969,1.07001315444375,1.06428319221179,5.2776908824416,2.30506425071931,0.75894634753143,1.04980416073495,0.577332676353072,0,0,0.0941438007767792,0.86101074534246,1.68471475667626,0.886860307073351,0.229723400206959,0,0,0.569647187174163,0.238231775457789,0,0,0,0.79312517629427,0.427296284509893,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0.73254089635947,0.728163130497081,0.445773537109913,0,1.19372242368845,0.296964680832639,0.307160702099232,1.9882952955326,1.68803299692615,0.890469640183247,0.329607748453519,0.211125408127993,1.59398390600856,0.828851746593443,0,0.409074730008619,0.246169610922139,1.55519793830904,0.269605053441981,0.179021174675609,0,1.67693789582787,0,2.22273980289274,2.90799823828566,1.66982576691332,0,0.7812832832557,0.0874599999961957,1.44999915086959,0.455173793141999,1.27126825146383,0.472775363535873,0.689486746482929,0,0.173624994933292,4.42870692906919,1.4471572635049,3.05163472634166,0.995213339381022,1.77328571372128,1.09692698576986,0,0.41827123283581,1.61595542857974,0.797594390929008,0,0.448788222048861,0.325942115766024,0,1.37396390102793,0,0,0,0,0.225595660617181,0.588187602953219,0.167821586975843,0,0,0.421996129056054,0,0.141353071433941,0,0,0.442287822516696,0.611030144933625,0,0.370691816839509,0.208843899010911,0.67401132980677,3.21031058919516,0.702793337176017,0,0,1.21390189767046,0,0,2.75465485467441,0.884612114798832,0.60129367765797,0.518440956986236,0,0.330991955875499,0,0,0,0.138674673013139,1.56203764501618,0.0979923974143777,0.34823682632161,1.04836000945218,0.343972064943233,0.483781656445426,0.438535902517113,0.246346371159628,1.84279131327997,0.529536760149002,1.12990370390266,0.548167698587004,0.397429223405979,0.949661939338181,0.195551382734803,0.0801588202515337,0.213452994739353,0.799238438328521,0.432271251462318,0.229073192331831,0.686379991447858,0,0.372757606696298,0.235694034616795,0.271808412147228,0.418411385249333,0.101998217636322,0.288950589901519,1.20084057741958,0.547621515567972,0,1.28929632425987,0,1.95497680890578,0.916641696046735,0,0.998395002494955,5.57993862577542,0.669514372325618,0.806201669840715,1.08089965062721,0,0,0.0824158583811665,0.13480708770837,0,0,2.38568906942791,1.77064427945048,0.803765742325096,0.825236619583403,0.415440338029185,0,0,0.91124334987037,0.670869375198532,0.788057072991982,0.577000469484979,0.739202355635845,0.896436696664224,0.383830394638891,5.00286728461357,3.31045985182716,0.5085370753095,5.97299561929084,3.45688596480507,3.91904832131291,0,0.082092520749339,1.70388021785422,0.679872549120754,0,0,2.19781025814636,0.92562821219883,0.171086837884329,1.40963004463334,0.854299300541557,1.10043013569766,1.65695622138878,0.496166021811951,0,0.121792598380896,1.27668251554036,1.08803560673895,0.2506898940227,1.22538230705385,0,0.157054096250234,4.43034089983493,4.27091927156871,1.251909307065,1.72022758707021,1.44207766997908,0.807253238237985,0.138348634936231,0.37494122388632,1.06154382279153,1.42732666772484,0.941063278792687,0.468334905806882,0.28984205722165,0.447764408660622,0.233713309847224,0.554805861502613,0.757612021100357,0.251567901752575,3.55924488638614,1.37304041038154,0.756154618816195,0.310874401165561,0.295710299979268,0.955780602982214,0.449803112163605,0.621051827505038,2.07353103920428,1.59505028734797,2.08698024724694,0.450772826991655,3.04644169735036,0.406870733204662,0.181848659202559,0.644463342254931,1.85613503951397,3.18476710958893,1.20008329398946,1.71697852591396,3.36749488765919,0,0.770479321629213,0.214441591374926,0.521988583930423,0.906823702049089,1.15761237161917,0.489473409012935,1.25362188757041,2.77921302444875,0.657852148736121,1.06013487567529,0.38582807654183,0,1.53744911152768,1.0362910251936,1.82315973706429,1.24432592536558,0.779441235357554,0.132864840313363,0.654261577023377,0.982829546539238,1.2288645437686,0,0.19998739585493,0,0.516644938982447,3.40509572140102,0.368211900503681,0.279759015438889,0,0.255788742607303,0.107824811396682,0.314531883711793,0.109209638192014,0.169732529954025,0.425149840203366,1.36329340684902,0,1.90802610392051,0,0.80057074828547,5.64281509905094,2.1437183414724,0.449604575675217,0,1.43670473151436,4.30744364905586,3.02486035466062,0.622415272177961,1.29180516505481,2.85538840518309,0.588886311006154,0.11796972334774,1.28400018965175,0,0.381382095467167,0.690359926060101,0,1.0529445968896,2.21875575573872,0.781514011233092,0,1.14640342257068,0.443568258651136,1.62090203084147,1.56215619722769,0.620060389503552,0.824405532520789,2.18789923607288,0,5.95453414067153,0.527613733078862,0.255524855279191,0,1.3451348888753,3.03482802118316,1.13831095675649,0.177404740325278,0,1.37190407549935,1.42736439251347,0.920818829879887,0.236387681767936,0.556157009460346,1.02041020705668,1.25692471932802,0,2.73947616152849,1.29556554731173,0,0.78624198594322,0.158013611732727,0.464965701472501,0.173858272302579,2.40513409419076,0.62164849248911,2.21934020222135,0,0,0.236664001461131,0.170426809518315,2.54032230114557,1.8328549483524,2.17144469965024,1.91107787795487,0,0,0,2.58971534875158,1.64260490969995,5.799072156691,2.91426595835484,0,0,0.237840181555137,0,0.329821550236287,0.150962843566674,0.617393264863557,0.874238242015829,1.88126918544609,0.980593287015622,0.235676547101626,2.55201007249429,0.297046400327086,2.5359343655004,1.52934403219035,0.751871343838829,0.193373663920732,0,0.178553938605658,0.352894871715692,0,0.730336388246517,0.458729283404541,1.29005624836306,0.315543124386369,2.65166811744567,3.49080552272302,0.5290268405154,5.57992527250127,1.84870251452567,0.865253124247578,0.630832124175395,0.655593431782173,0.760191006068622,1.42784361638774,0.26721740526556,0.459474497674225,0.752122617877125,1.06090177505535,0.803892390468535,2.48750831837634,0.620597975171371,2.77204176471275,1.90451545170992,0.452122368852043,0.0620747142958579,0.672791175483681,0.445530107947154,1.41482032270754,2.61260097476354,4.79126621519393,0.134704106029175,0.358611026963382,0.665320713092027,0.0814032686109745,0.106727345877715,1.9307228228694,0.538951212639521,0,0.488965776731466,1.62758471326295,0,0.201273793591026,0.320568492303233 | |||
|short_description=p5@FAM127A | |||
}} |
Revision as of 07:01, 23 January 2014
Short description: | p5@FAM127A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FAM127A_5end |
Coexpression cluster: | NA |
Association with transcript: | 288bp_to_CR456853, D88756, DQ891384, EU176632_5end |
EntrezGene: | FAM127A |
HGNC: | 2569 |
UniProt: | O15255 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 4.03e-11 | 58 |
myoblast | 4.03e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.03e-11 | 58 |
smooth muscle cell | 2.87e-10 | 43 |
smooth muscle myoblast | 2.87e-10 | 43 |
muscle cell | 5.05e-10 | 55 |
mesodermal cell | 3.31e-08 | 121 |
electrically responsive cell | 7.42e-08 | 61 |
electrically active cell | 7.42e-08 | 61 |
preadipocyte | 4.76e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 4.02e-14 | 78 |
dense mesenchyme tissue | 9.11e-14 | 73 |
paraxial mesoderm | 3.86e-13 | 72 |
presumptive paraxial mesoderm | 3.86e-13 | 72 |
skeletal muscle tissue | 3.94e-13 | 62 |
striated muscle tissue | 3.94e-13 | 62 |
myotome | 3.94e-13 | 62 |
somite | 6.32e-13 | 71 |
presomitic mesoderm | 6.32e-13 | 71 |
presumptive segmental plate | 6.32e-13 | 71 |
dermomyotome | 6.32e-13 | 71 |
trunk paraxial mesoderm | 6.32e-13 | 71 |
muscle tissue | 3.11e-12 | 64 |
musculature | 3.11e-12 | 64 |
musculature of body | 3.11e-12 | 64 |
multilaminar epithelium | 6.91e-11 | 83 |
cell layer | 7.28e-11 | 309 |
epithelium | 1.39e-10 | 306 |
trunk mesenchyme | 2.69e-10 | 122 |
mesenchyme | 2.61e-09 | 160 |
entire embryonic mesenchyme | 2.61e-09 | 160 |
anatomical conduit | 1.76e-07 | 240 |
neural tube | 7.03e-07 | 56 |
neural rod | 7.03e-07 | 56 |
future spinal cord | 7.03e-07 | 56 |
neural keel | 7.03e-07 | 56 |