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FFCP PHASE1:Mm9::chr6:86145436..86145453,+: Difference between revisions

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{{FFCP|EntrezGene=21802|HGNC=|MCL_coexpression_id=892|UniProt=P48030|association_with_transcript=16bp_to_ENSMUST00000032066_5end|description=CAGE_peak_1_at_Tgfa_5end|id=chr6:86145436..86145453,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.09e-11!52;UBERON:0005068!9.09e-11!52;UBERON:0006241!9.09e-11!52;UBERON:0007135!9.09e-11!52;UBERON:0007023!5.99e-10!51;UBERON:0000955!8.88e-10!50;UBERON:0006238!8.88e-10!50;UBERON:0002616!2.90e-09!49;UBERON:0000468!6.38e-09!333;UBERON:0004121!8.14e-09!102;UBERON:0000924!8.14e-09!102;UBERON:0006601!8.14e-09!102;UBERON:0000033!1.58e-08!63;UBERON:0002020!6.13e-08!34;UBERON:0004111!8.12e-08!122;UBERON:0003080!2.25e-07!40;UBERON:0001017!2.54e-07!73;UBERON:0005743!2.54e-07!73;UBERON:0000073!3.00e-07!75;UBERON:0001016!3.00e-07!75;UBERON:0002346!4.60e-07!71;UBERON:0003075!4.60e-07!71;UBERON:0007284!4.60e-07!71;UBERON:0002780!5.79e-07!39;UBERON:0001890!5.79e-07!39;UBERON:0006240!5.79e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-11,54;UBERON:0001049,1.31e-10,52;UBERON:0005068,1.31e-10,52;UBERON:0006241,1.31e-10,52;UBERON:0007135,1.31e-10,52;UBERON:0007023,5.97e-10,51;UBERON:0004121,5.71e-09,95;UBERON:0000924,5.71e-09,95;UBERON:0006601,5.71e-09,95;UBERON:0010371,1.35e-08,73;UBERON:0000955,2.63e-08,47;UBERON:0006238,2.63e-08,47;UBERON:0001017,6.49e-08,73;UBERON:0002616,8.55e-08,46;UBERON:0002020,8.58e-08,34;UBERON:0001016,1.28e-07,75;UBERON:0003080,2.95e-07,40;UBERON:0002346,6.01e-07,64;UBERON:0003075,6.01e-07,64;UBERON:0007284,6.01e-07,64;UBERON:0002780,7.95e-07,39;UBERON:0001890,7.95e-07,39;UBERON:0006240,7.95e-07,39|phase1_expression=1.12104192973356,1.39590163055744,1.36499771816861,1.51232105653415,4.00716583957078,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,1.91990907352088,2.2940928106717,1.14846392823004,0.86152399231815,1.50829862880122,0.950117097281869,0.252030129759931,1.33038306393183,0.635030673459631,0,0,0.866554859253824,0.166234645358492,0.408338712524738,0,0,0,0,0,0,1.88845226963366,1.31790010585369,2.56965453026354,0.782391344348039,0.218025156380447,1.31811709640683,2.13872888981712,0.419959264876088,0,0,0,0,0.514518872071894,0.573066879877513,3.09403255366465,1.21389876515759,4.23192783417626,1.26766280701236,0.677689064138264,0,0,0,0,5.99200221036809,4.2264013585371,0.622137673850866,0.540023753326763,0.630974884054146,14.2825492201902,15.2399293256613,2.69479758272899,1.43768206527355,2.75765635983006,5.50579404996943,7.53355294702608,7.98753972932466,1.71452174049252,2.74462930807229,0.52091337055676,7.81712397203867,4.50210088025344,8.25110537994775,9.1334861496837,6.26435395516053,4.10078780815661,1.96888102666279,0.906858721281426,3.76823835312181,0,4.75979933595425,5.39703191637817,4.54843492213368,2.68816132258401,3.7919993435573,0,0,0,2.53518155598025,0,2.54805239706646,0,1.94841936910093,2.53359865475099,3.0331466700887,1.37020655662872,18.3845897389492,3.71105347662062,0.693941307064543,1.21786191324856,1.38369298353635,1.05505848386836,1.17588707135705,1.0053327306374,72.1809305784372,1.87979163995885,0,0.647067399789637,0.220841518460394,0.484875253135222,7.45567044872489,4.68449275218475,3.35114730901528,1.53274233125155,0,0,0,8.23848516726525,37.0575488283087,13.4450156760765,7.30062144807561,6.64860189058859,8.93488591606108,11.8436122039463,0.611036183101898,2.98576729464223,3.28539585963777,1.26265113531884,0.260240885925407,0.689706313300419,0.360124259610698,1.65775299619287,1.56483948048054,0.512454881139399,0.0937017245597288,2.58703370739016,0,0.756424320671277,0.703804496655795,0,3.33656699070717,11.4923214952315,7.20237477427802,0.995171334092466,0,0,0,0.207125772535502,0.469052119962192,0.720248245844059,0,0.196764231747404,0.308534225774757,0,0.804820204198858,0.350296027101508,0.822799249567402,0.164167464079095,0.324275238183423,0.438599962275997,0.219550115291051,0.402619256281115,7.99101804543684,2.57261530948211,1.65209391491899,0.264450566663544,0.639864751605702,0.232236671860439,0.644337306610467,0.80673409849337,0.889512175379481,1.14135375667535,0.474529061544512,4.44687177754829,1.75934646160189,0.994782360205754,1.9496408711912,0.898819408654221,0.432276099749388,1.1948476395262,1.13800740571849,1.82797620175566,1.1270773567308,1.01825663922657,1.35766741017338,2.31448205638051,0.379419222745544,0.590440591918409,0.627994911365499,0.370191491765402,3.55743152504579,0.166845105716094,0.393117990226406,0,0.811440485554012,1.92941727801933,1.52775511068852,2.01387296215567,1.45921704097532,6.58947391651396,5.75072826109418,4.46569137202204,12.793544597697,10.1031551178845,3.58794827043824,3.37710464954357,3.51031061316549,0,0.651859905768103,0.678980343100753,0.234690248288502,0.502518772325447,0.238043640886014,1.17080188714679,0.630540576424764,0.44292937929755,0.318909537314974,3.60499292374624,1.03610989119537,2.02508682014116,0,0,0.983528546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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:21802
|HGNC=
|MCL_coexpression_id=892
|TSSclassifier=NA
|UniProt=uniprot:P48030
|association_with_transcript=16bp_to_ENSMUST00000032066_5end
|cluster_id=chr6:86145436..86145453,+
|description=CAGE_peak_1_at_Tgfa_5end
|id=chr6:86145436..86145453,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.28e-11,54;UBERON:0001049,1.31e-10,52;UBERON:0005068,1.31e-10,52;UBERON:0006241,1.31e-10,52;UBERON:0007135,1.31e-10,52;UBERON:0007023,5.97e-10,51;UBERON:0004121,5.71e-09,95;UBERON:0000924,5.71e-09,95;UBERON:0006601,5.71e-09,95;UBERON:0010371,1.35e-08,73;UBERON:0000955,2.63e-08,47;UBERON:0006238,2.63e-08,47;UBERON:0001017,6.49e-08,73;UBERON:0002616,8.55e-08,46;UBERON:0002020,8.58e-08,34;UBERON:0001016,1.28e-07,75;UBERON:0003080,2.95e-07,40;UBERON:0002346,6.01e-07,64;UBERON:0003075,6.01e-07,64;UBERON:0007284,6.01e-07,64;UBERON:0002780,7.95e-07,39;UBERON:0001890,7.95e-07,39;UBERON:0006240,7.95e-07,39
|phase1_expression=1.12104192973356,1.39590163055744,1.36499771816861,1.51232105653415,4.00716583957078,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,1.91990907352088,2.2940928106717,1.14846392823004,0.86152399231815,1.50829862880122,0.950117097281869,0.252030129759931,1.33038306393183,0.635030673459631,0,0,0.866554859253824,0.166234645358492,0.408338712524738,0,0,0,0,0,0,1.88845226963366,1.31790010585369,2.56965453026354,0.782391344348039,0.218025156380447,1.31811709640683,2.13872888981712,0.419959264876088,0,0,0,0,0.514518872071894,0.573066879877513,3.09403255366465,1.21389876515759,4.23192783417626,1.26766280701236,0.677689064138264,0,0,0,0,5.99200221036809,4.2264013585371,0.622137673850866,0.540023753326763,0.630974884054146,14.2825492201902,15.2399293256613,2.69479758272899,1.43768206527355,2.75765635983006,5.50579404996943,7.53355294702608,7.98753972932466,1.71452174049252,2.74462930807229,0.52091337055676,7.81712397203867,4.50210088025344,8.25110537994775,9.1334861496837,6.26435395516053,4.10078780815661,1.96888102666279,0.906858721281426,3.76823835312181,0,4.75979933595425,5.39703191637817,4.54843492213368,2.68816132258401,3.7919993435573,0,0,0,2.53518155598025,0,2.54805239706646,0,1.94841936910093,2.53359865475099,3.0331466700887,1.37020655662872,18.3845897389492,3.71105347662062,0.693941307064543,1.21786191324856,1.38369298353635,1.05505848386836,1.17588707135705,1.0053327306374,72.1809305784372,1.87979163995885,0,0.647067399789637,0.220841518460394,0.484875253135222,7.45567044872489,4.68449275218475,3.35114730901528,1.53274233125155,0,0,0,8.23848516726525,37.0575488283087,13.4450156760765,7.30062144807561,6.64860189058859,8.93488591606108,11.8436122039463,0.611036183101898,2.98576729464223,3.28539585963777,1.26265113531884,0.260240885925407,0.689706313300419,0.360124259610698,1.65775299619287,1.56483948048054,0.512454881139399,0.0937017245597288,2.58703370739016,0,0.756424320671277,0.703804496655795,0,3.33656699070717,11.4923214952315,7.20237477427802,0.995171334092466,0,0,0,0.207125772535502,0.469052119962192,0.720248245844059,0,0.196764231747404,0.308534225774757,0,0.804820204198858,0.350296027101508,0.822799249567402,0.164167464079095,0.324275238183423,0.438599962275997,0.219550115291051,0.402619256281115,7.99101804543684,2.57261530948211,1.65209391491899,0.264450566663544,0.639864751605702,0.232236671860439,0.644337306610467,0.80673409849337,0.889512175379481,1.14135375667535,0.474529061544512,4.44687177754829,1.75934646160189,0.994782360205754,1.9496408711912,0.898819408654221,0.432276099749388,1.1948476395262,1.13800740571849,1.82797620175566,1.1270773567308,1.01825663922657,1.35766741017338,2.31448205638051,0.379419222745544,0.590440591918409,0.627994911365499,0.370191491765402,3.55743152504579,0.166845105716094,0.393117990226406,0,0.811440485554012,1.92941727801933,1.52775511068852,2.01387296215567,1.45921704097532,6.58947391651396,5.75072826109418,4.46569137202204,12.793544597697,10.1031551178845,3.58794827043824,3.37710464954357,3.51031061316549,0,0.651859905768103,0.678980343100753,0.234690248288502,0.502518772325447,0.238043640886014,1.17080188714679,0.630540576424764,0.44292937929755,0.318909537314974,3.60499292374624,1.03610989119537,2.02508682014116,0,0,0.983528546038072,0.551873492609465,13.0045977890111,9.84578167374507,0,0.504941854408746,0.315508219416257,0,0.646270193198397,0,0,0.283076530788832,0,0,0,14.1381379225595,11.071326646245,1.6025904330053,1.79175655288934,9.56826713240706,2.65490276679926,0.971122544619926,0.604647113929502,0.943025398779491,0.590603785761546,1.22974059177571,2.32585463851399,0.727067458955011,3.56497378384721,4.10847785316561,2.10837217149998,2.06271086496374,1.36175842301515,1.44048875225048,1.94038025674132,1.28602221018955,3.19212420556092,2.49716344642899,3.9491764944509,1.8267896946876,10.560226862867,4.44847348814022,1.98475558249466,47.9818996059707,13.5630118424561,19.0588842772972,52.0463419853675,76.4896592811985,2.33184669303881,18.542530201051,0.341741761595705,4.95328483111734,0.925972636848558,0.188368457004691,0,0,0,0,0,6.68269432610579,0.158167996790568,1.01659733563424,2.70013352054503,13.381650944926,11.1364907510551,12.2726555210187,7.43881101528023,9.94672579539312,8.81381818384192,4.34937519160848,4.50954350947352,0.598066184175915,1.15820943319968,1.94451188344048,1.93739735216597,3.54807863530634,2.46450201156083,1.3020438484395,0.524296722128554,4.1069300540421,3.45636007509439,0.316011120628178,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0.480781798079875,0.147689527174577,0.100966449948148,0.381034033274999,0.100826185136841,0.38983152295901,0.192423683280659,0.233753804363138,16.3245876202952,1.55390167361845,0,0.335769232728157,16.0347363046718,4.31669693537719,3.29672923681077,23.1517849405391,3.51100472824754,7.90652579663893,4.14292712856459,6.87474616127276,5.15559547031063,2.74033007908257,6.0431511791176,3.37511250115903,3.15224842256954,4.98456649882625,2.5888015587591,0,1.19707462020309,0.682934423016537,3.40349403895612,1.04806581313991,0.919217542250071,1.55572709461131,1.64828045791115,2.88827288632634,2.27427490587418,2.5347929989024,1.88626341386076,1.87283014939765,1.60062881012173,2.12511235135769,0.476293691283074,2.0859178670074,2.31491064556446,4.12085900803307,2.06078488188156,0.685738504770831,2.48466128623072,1.43061713968393,3.0522747492789,2.35273451038327,1.77690676572521,2.37806364734604,2.36762740294059,1.22223702461276,1.68342681497322,2.72860541685601,2.1670986122624,2.86461730218783,3.25367366490529,4.62975866354739,8.49355964989016,4.21076895201735,1.71896843238639,2.29545998482612,7.50010825006353,1.85494268496337
|short_description=p1@Tgfa
}}

Revision as of 05:38, 6 August 2015

Short description:p1@Tgfa
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Tgfa_5end
Coexpression cluster:MCL_coexpression_mm9:892
Association with transcript: 16bp_to_ENSMUST00000032066_5end
EntrezGene:21802
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Tgfa

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.98
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.92
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H91.15
GP2+ M cell, pool2.CNhs13231.11846-124I10.86
GP2+ M cell, pool3.CNhs13240.11847-124I21.51
Ileum epithelium, pool1.CNhs13199.10252-104B90.95
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.89
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.32
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.57
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C85.99
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.54
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D515.24
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.44
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.71
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I68.25
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D69.13
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.26
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D91.97
Mouse Schwann, donor2.CNhs12573.11746-123F90.91
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.77
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C85.40
Mouse hepatocyte, donor6.CNhs13090.11822-124F44.55
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.79
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.54
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H918.38
adrenal gland, adult.CNhs10508.49-24D73.71
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.01
amnion, adult pregnant day17.5.CNhs10488.583-22A872.18
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H71.53
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A48.24
corpus striatum, adult.CNhs10487.19-21D837.06
corpus striatum, neonate N00.CNhs11226.630-43F113.45
cortex, adult.CNhs10473.12-14D57.30
cortex, neonate N30.CNhs11107.1392-42F26.65
diencephalon, adult.CNhs10482.20-12F28.93
diencephalon, neonate N30.CNhs11201.1388-42B211.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.61
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.99
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C61.56
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A22.59
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C411.49
forelimb, embryo E18.CNhs11008.1520-43B57.20
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.80
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.32
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E87.99
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.64
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B81.76
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A51.95
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F81.83
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.36
kidney, neonate N00.CNhs11214.646-21G72.31
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.93
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.01
liver, neonate N00.CNhs11117.641-24F41.46
liver, neonate N03.CNhs11123.1345-25G26.59
liver, neonate N06.CNhs11101.684-20A85.75
liver, neonate N07.CNhs11103.716-20H24.47
liver, neonate N10.CNhs11115.751-24B912.79
liver, neonate N20.CNhs11220.823-25A310.10
liver, neonate N25.CNhs11198.1368-26H13.59
liver, neonate N30.CNhs11106.1382-42D13.38
lung, adult.CNhs10474.28-22B13.51
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A43.60
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C213.00
medulla oblongata, neonate N30.CNhs11200.1396-42A39.85
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I914.14
ovary, adult.CNhs10507.91-2I711.07
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I41.79
oviduct, adult pregnant day01.CNhs10500.988-6G69.57
pancreas, adult.CNhs10486.34-16E42.65
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D83.56
pancreas, neonate N16.CNhs11136.787-43B64.11
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C71.94
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B93.19
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I710.56
placenta, adult pregnant day17.CNhs10464.577-18G34.45
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C347.98
skin, neonate N00.CNhs11124.650-25G413.56
skin, neonate N03.CNhs11215.662-22H319.06
skin, neonate N06.CNhs11097.693-20I552.05
skin, neonate N10.CNhs11108.762-6C476.49
small intestine, neonate N16.CNhs11114.790-21I12.33
spinal cord, adult.CNhs10505.24-13C918.54
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F20.93
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D42.70
stomach, embryo E17.CNhs11006.1035-18D513.38
stomach, embryo E18.CNhs10999.1286-20C611.14
stomach, neonate N03.CNhs11193.1340-24B812.27
stomach, neonate N07.CNhs11210.718-18A97.44
stomach, neonate N25.CNhs11104.1355-25E49.95
stomach, neonate N30.CNhs11134.1386-42I18.81
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G54.51
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B72.46
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H34.11
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B416.32
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E416.03
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E53.30
vagina, adult.CNhs10502.89-27D523.15
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A24.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A36.87
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D75.16
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A63.38
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.15
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D23.40
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.13
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I58.49
whole body, embryo E18.CNhs10516.493-3B34.21
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D17.50
whole body, neonate N10.CNhs10518.761-6B41.85





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.28e-1154
neural tube1.31e-1052
neural rod1.31e-1052
future spinal cord1.31e-1052
neural keel1.31e-1052
adult organism5.97e-1051
ectoderm-derived structure5.71e-0995
ectoderm5.71e-0995
presumptive ectoderm5.71e-0995
ecto-epithelium1.35e-0873
brain2.63e-0847
future brain2.63e-0847
central nervous system6.49e-0873
regional part of brain8.55e-0846
gray matter8.58e-0834
nervous system1.28e-0775
anterior neural tube2.95e-0740
neurectoderm6.01e-0764
neural plate6.01e-0764
presumptive neural plate6.01e-0764
regional part of forebrain7.95e-0739
forebrain7.95e-0739
future forebrain7.95e-0739
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