FFCP PHASE1:Hg19::chrX:12994220..12994275,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7114 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11881 | |||
|TSSclassifier=strong | |||
|UniProt=A2VCK8 | |||
|association_with_transcript=-88bp_to_BC104464,BC104465_5end | |||
|coexpression_cluster_id=C4095 | |||
|description=CAGE_peak_4_at_TMSB4X_5end | |||
|id=chrX:12994220..12994275,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.25e-51!172;CL:0000566!1.25e-51!172;CL:0000738!2.96e-51!140;CL:0002032!1.86e-48!165;CL:0000837!1.86e-48!165;CL:0000988!3.74e-46!182;CL:0002031!3.92e-42!124;CL:0002087!2.91e-41!119;CL:0000766!6.42e-35!76;CL:0000763!9.81e-35!112;CL:0000049!9.81e-35!112;CL:0000557!9.07e-31!71;CL:0000839!1.40e-29!70;CL:0002009!3.51e-29!65;CL:0002194!3.64e-28!63;CL:0000576!3.64e-28!63;CL:0000040!3.64e-28!63;CL:0000559!3.64e-28!63;CL:0002057!3.02e-27!42;CL:0000860!1.36e-23!45;CL:0000134!1.26e-21!358;CL:0002320!3.81e-20!365;CL:0000048!2.09e-18!430;CL:0000034!7.02e-18!444;CL:0000723!1.10e-16!436;CL:0000219!7.03e-16!390;CL:0000542!5.94e-12!53;CL:0000051!5.94e-12!53;CL:0000838!1.12e-11!52;CL:0000945!1.95e-09!24;CL:0000826!1.95e-09!24;CL:0000236!2.85e-07!14;CL:0002393!3.04e-07!9;CL:0002397!3.04e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.74e-21;33!CL:0002057;8.74e-21;33!CL:0000576;4.04e-20;48!CL:0000473;7.05e-20;39!CL:0000234;7.05e-20;39!CL:0000766;2.12e-17;69!CL:0002087;3.21e-13;104!CL:0000738;1.29e-12;136!CL:0000763;1.23e-11;100!CL:0000945;3.50e-09;24!CL:0000988;4.70e-09;177!CL:0000219;8.39e-08;193!CL:0000236;7.40e-07;13!CL:0000094;8.02e-07;8!CL:0000542;9.40e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.97e-57,168;CL:0000738,1.09e-56,136;CL:0002032,4.80e-54,161;CL:0000837,4.80e-54,161;CL:0000988,3.20e-51,177;CL:0002031,6.13e-47,120;CL:0002087,4.56e-46,115;CL:0000766,7.79e-41,72;CL:0000763,2.44e-40,108;CL:0000049,2.44e-40,108;CL:0000557,2.71e-36,67;CL:0000839,5.72e-35,66;CL:0002009,9.77e-35,61;CL:0002194,1.17e-33,59;CL:0000576,1.17e-33,59;CL:0000040,1.17e-33,59;CL:0000559,1.17e-33,59;CL:0000473,2.16e-31,48;CL:0000234,2.16e-31,48;CL:0000860,1.23e-28,42;CL:0002057,1.23e-28,42;CL:0000134,1.23e-23,354;CL:0002320,7.19e-22,361;CL:0000048,2.62e-20,427;CL:0000034,7.79e-20,441;CL:0000723,1.53e-18,433;CL:0000219,1.26e-17,386;CL:0000542,4.64e-12,53;CL:0000051,4.64e-12,53;CL:0000838,9.02e-12,52;CL:0000945,1.61e-09,24;CL:0000826,1.61e-09,24;CL:0000236,1.40e-07,14;CL:0002393,1.50e-07,9;CL:0002397,1.50e-07,9;CL:0000094,9.73e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.28e-21;42!CL:0000049;1.58e-11;108!CL:0000051;9.40e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.38e-36!102;UBERON:0003061!6.38e-36!102;UBERON:0002193!1.39e-35!112;UBERON:0002371!9.44e-30!80;UBERON:0001474!1.17e-24!86;UBERON:0002405!3.57e-22!115;UBERON:0004765!4.58e-19!101;UBERON:0001434!4.58e-19!101;UBERON:0002384!5.45e-19!375;UBERON:0003081!7.14e-14!216;UBERON:0002204!1.62e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.75e-41,98;UBERON:0003061,8.75e-41,98;UBERON:0002193,1.82e-40,108;UBERON:0002405,9.77e-36,93;UBERON:0002371,5.59e-35,76;UBERON:0001474,2.20e-29,82;UBERON:0004765,3.39e-24,90;UBERON:0001434,2.92e-21,100;UBERON:0002384,7.41e-21,371;UBERON:0003081,1.26e-19,203;UBERON:0002204,1.24e-11,167;UBERON:0000926,2.81e-08,315;UBERON:0004120,2.81e-08,315;UBERON:0006603,2.81e-08,315 | |||
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| |||
|short_description=p4@TMSB4X | |||
}} |
Revision as of 04:50, 23 January 2014
Short description: | p4@TMSB4X |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMSB4X_5end |
Coexpression cluster: | C4095_CD14CD16_B_Eosinophils_CD14_Basophils_Neutrophils_CD19 |
Association with transcript: | -88bp_to_BC104464, BC104465_5end |
EntrezGene: | TMSB4X |
HGNC: | 11881 |
UniProt: | A2VCK8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.75e-41 | 98 |
blood island | 8.75e-41 | 98 |
hemolymphoid system | 1.82e-40 | 108 |
immune system | 9.77e-36 | 93 |
bone marrow | 5.59e-35 | 76 |
bone element | 2.20e-29 | 82 |
skeletal element | 3.39e-24 | 90 |
skeletal system | 2.92e-21 | 100 |
connective tissue | 7.41e-21 | 371 |
lateral plate mesoderm | 1.26e-19 | 203 |
musculoskeletal system | 1.24e-11 | 167 |
mesoderm | 2.81e-08 | 315 |
mesoderm-derived structure | 2.81e-08 | 315 |
presumptive mesoderm | 2.81e-08 | 315 |