FFCP PHASE1:Mm9::chr6:83106347..83106381,-: Difference between revisions
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{{FFCP|EntrezGene=75659|HGNC=|MCL_coexpression_id=60|UniProt=Q9R0D8|association_with_transcript=0bp_to_ENSMUST00000146969,ENSMUST00000154625,NM_023790,uc009cmv.2,uc009cmw.2_5end|description=CAGE_peak_1_at_Wdr54_5end|id=chr6:83106347..83106381,-|ontology_enrichment_celltype=CL:0002319!3.65e-17!43;CL:0000221!5.33e-17!44;CL:0000133!5.33e-17!44;CL:0000055!2.40e-16!50;CL:0000540!1.28e-12!33;CL:0000047!1.28e-12!33;CL:0000031!1.28e-12!33;CL:0000404!1.28e-12!33;CL:0000393!1.60e-12!39;CL:0000211!1.60e-12!39;CL:0000117!5.99e-12!23;CL:0000337!5.99e-12!23;CL:0002321!3.75e-07!70;CL:0000220!3.75e-07!70|ontology_enrichment_celltype_v019_2=CL:0002319,1.46e-17,43;CL:0000221,2.15e-17,44;CL:0000133,2.15e-17,44;CL:0000540,6.71e-13,33;CL:0000047,6.71e-13,33;CL:0000031,6.71e-13,33;CL:0000404,6.71e-13,33;CL:0000393,8.42e-13,39;CL:0000211,8.42e-13,39;CL:0000117,3.25e-12,23;CL:0000337,3.25e-12,23;CL:0002321,1.09e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.66e-34!75;UBERON:0001016!4.66e-34!75;UBERON:0001017!1.95e-33!73;UBERON:0005743!1.95e-33!73;UBERON:0004121!7.64e-30!102;UBERON:0000924!7.64e-30!102;UBERON:0006601!7.64e-30!102;UBERON:0002346!5.55e-27!71;UBERON:0003075!5.55e-27!71;UBERON:0007284!5.55e-27!71;UBERON:0000033!6.53e-26!63;UBERON:0001049!1.92e-25!52;UBERON:0005068!1.92e-25!52;UBERON:0006241!1.92e-25!52;UBERON:0007135!1.92e-25!52;UBERON:0000955!5.27e-25!50;UBERON:0006238!5.27e-25!50;UBERON:0002616!1.65e-24!49;UBERON:0003056!1.70e-21!49;UBERON:0003080!2.86e-19!40;UBERON:0002780!1.14e-18!39;UBERON:0001890!1.14e-18!39;UBERON:0006240!1.14e-18!39;UBERON:0002020!9.11e-18!34;UBERON:0002791!1.28e-15!29;UBERON:0003528!1.28e-15!29;UBERON:0001893!1.28e-15!29;UBERON:0000153!1.76e-11!94;UBERON:0000025!1.96e-11!114;UBERON:0000956!2.52e-11!21;UBERON:0001869!2.52e-11!21;UBERON:0000203!2.52e-11!21;UBERON:0004111!3.56e-11!122;UBERON:0007811!1.78e-10!86;UBERON:0002619!1.13e-09!17;UBERON:0003076!9.89e-07!12;UBERON:0003057!9.89e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.82e-35,75;UBERON:0001017,2.96e-34,73;UBERON:0004121,9.12e-31,95;UBERON:0000924,9.12e-31,95;UBERON:0006601,9.12e-31,95;UBERON:0002346,3.06e-29,64;UBERON:0003075,3.06e-29,64;UBERON:0007284,3.06e-29,64;UBERON:0000073,1.45e-27,54;UBERON:0001049,4.69e-26,52;UBERON:0005068,4.69e-26,52;UBERON:0006241,4.69e-26,52;UBERON:0007135,4.69e-26,52;UBERON:0010314,1.22e-25,92;UBERON:0010371,1.94e-24,73;UBERON:0000955,1.54e-23,47;UBERON:0006238,1.54e-23,47;UBERON:0002616,4.86e-23,46;UBERON:0003056,5.23e-22,49;UBERON:0003080,1.01e-19,40;UBERON:0002780,4.17e-19,39;UBERON:0001890,4.17e-19,39;UBERON:0006240,4.17e-19,39;UBERON:0002020,3.51e-18,34;UBERON:0003528,5.58e-16,29;UBERON:0002791,5.58e-16,29;UBERON:0001893,5.58e-16,29;UBERON:0000956,1.42e-11,21;UBERON:0001869,1.42e-11,21;UBERON:0000203,1.42e-11,21;UBERON:0000025,1.87e-10,114;UBERON:0004111,2.50e-10,122;UBERON:0002619,7.01e-10,17;UBERON:0003076,7.28e-07,12;UBERON:0003057,7.28e-07,12|phase1_expression=4.48416771893423,0,0,0.30246421130683,0,0.503637815735669,0,0.387369970324729,0,0,0,0.0797721589953364,0,0.174840804837995,0,0,0,0.157731082679119,0.137114433605739,0,14.9676190665883,1.88652807281682,0.522399578277871,0.319984845586813,0.91763712426868,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0.443461021310609,0.635030673459631,9.22597181376855,15.8481681015439,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,2.26614272356039,3.4468156614635,1.83546752161682,6.25913075478431,8.50298109883741,10.7646229539891,8.1660557611199,7.41928034614421,17.2503077237966,0,0,0.336093799142464,4.11615097657515,2.57880095944881,4.12537673821954,5.46254444320914,11.6378015439847,8.23980824558033,3.38844532069132,3.55717918444456,2.6996991518442,2.96659908770092,2.1314403448383,9.28760342607055,23.4373166246148,6.42875596312561,6.21027316325777,7.57169860864975,7.9982275633065,8.39300455616131,7.59442955132715,8.53024692062304,11.0306254393203,18.7196997698961,11.2364857514965,13.3637683932932,8.30883612700221,9.69769022185542,7.8137005583514,13.4007839520663,24.1987922313622,16.0438160165651,6.48182888042069,6.83384067835694,8.76077395378913,3.93776205332557,6.04572480854284,0.869593466105033,0.860423876981386,4.0798280022465,2.15881276655127,1.29955283489534,0.448026887097336,3.37066608316204,5.11290967734173,5.97507810586598,7.77347063922748,2.39433813620357,6.41632387071589,0,0,1.73192832808971,1.26679932737549,0.505524445014783,2.51204535381932,1.03575153458869,2.22663208597237,2.4287945747259,2.74018930480927,3.22861696158482,1.80867168663147,0.823120949949934,2.63899841792318,0.741584903203122,1.01219549843938,0,0.970601099684455,0.883366073841574,0.969750506270444,3.72783522436244,9.36898550436951,14.0329293565015,0,0,0.599902730993408,0.254140454146129,11.9832511523858,12.8100168789215,7.03664371832041,17.2086076990354,14.5757810678288,13.5062228963714,13.4660248346239,1.83310854930569,1.11966273549084,2.77995034277042,2.94618598241064,6.63614259109789,7.35686734187113,4.68161537493908,4.37043971723574,3.94611695077702,4.74020765053944,4.49768277886698,5.43277078551933,6.46703978798527,5.8622884852024,5.27853372491847,3.06874025398605,3.05851974148158,3.83077383174383,2.26360350048738,3.98068533636986,0,0,0,3.93538967817454,3.51789089971644,4.32148947506436,4.49814997611899,2.55793501271625,3.5481435964097,3.25547522650571,4.02410102099429,1.75148013550754,1.6455984991348,0.985004784474571,1.13496333364198,0.877199924551994,1.53685080703735,1.20785776884335,11.3556572224629,7.9236551532049,0.660837565967596,0.264450566663544,6.61193576659225,3.71578674976702,2.57734922644187,1.21010114774006,1.11189021922435,0.760902504450237,1.89811624617805,1.4822905925161,1.00534083520108,0.397912944082302,0.974820435595601,0,0.864552199498777,0,7.58671603812327,2.62771579002376,3.38123207019241,3.86937522906097,2.13347735884388,1.61312385747733,1.64414996523069,1.03327103585722,1.56998727841375,2.46794327843601,0.296452627087149,1.00107063429656,1.17935397067922,0.674586337154561,0.405720242777006,0.72353147925725,0.50925170356284,0.287696137450811,0.486405680325106,0.274561413188081,0,1.48856379067401,0.624075346229121,0.505157755894224,1.07638448113147,2.41221760681684,2.95605104266567,3.7898282354097,4.23708938749267,2.8856664581782,3.05097322775053,2.34508760418542,2.38043640886014,0.975668239288994,1.7339865851681,1.32878813789265,1.91345722388985,1.14704320301017,1.03610989119537,1.15719246865209,4.52373851817817,3.80733978673097,0.983528546038072,0.551873492609465,11.7201930691088,10.0802050469295,4.26230857979356,1.51482556322624,4.73262329124385,3.51394869866975,4.30846795465598,1.67278158566786,3.7875774594007,4.24614796183249,4.04810701674894,3.79932615284705,3.16230222357219,8.03303291054518,2.98074178937364,4.80777129901589,1.46598263418218,3.79431282836832,0,2.42780636154981,0.604647113929502,0.754420319023592,1.47650946440386,0.922305443831782,1.03371317267288,1.45413491791002,1.42598951353889,0.316036757935816,0,0,10.5536277783674,4.68158844481407,6.72665155670323,4.07240366560025,4.07882537377229,3.21063871683727,4.60737257685939,4.26250928760439,1.64270195644597,0.42366414172764,1.98475558249466,2.14352128823924,1.13025098687134,1.08563264870681,0.716234064018819,1.80554989719567,0.582961673259701,10.198391610578,0.341741761595705,2.47664241555867,0.740778109478847,0.188368457004691,0,0.457556346413045,0.169978429993855,0.139951452323658,0.276399947608848,0,4.11236791655476,3.45643094115643,2.91614420218863,1.88179466413022,1.52853794622324,1.21377911746339,1.32245529160537,1.30877970992015,3.24037433229482,0,90.1908701894705,1.34564891439581,3.80554528051325,2.52786544847262,2.0665571756437,1.85851738039856,1.17357238645754,1.43224823328345,1.67774951081137,28.5069262574687,59.0461512828624,0,1.62180172232131,1.33524244314275,1.55904987573354,1.07416017400489,0.596044064343795,0.120195449519969,0.147689527174577,0.403865799792591,0.15241361331,0.403304740547362,0.194915761479505,0.288635524920988,0.116876902181569,2.0405734525369,5.77163478772568,3.05027112472217,2.51826924546118,3.47741269257943,1.50145980360946,1.28206136987086,2.14368379079066,1.50471631210609,10.7302850097243,13.8097570952153,12.0308057822273,5.32744865265431,12.3314853558716,6.0431511791176,12.8254275044043,13.9599572999508,14.9536994964788,10.3552062350364,2.28332164685189,4.38927360741134,6.65861062441123,3.40349403895612,1.04806581313991,1.10306105070008,2.44471400581777,1.44224540067226,0.962757628775446,1.76888048234658,2.02783439912192,1.50901073108861,1.96647165686753,1.92075457214608,1.89537047553524,1.90517476513229,1.39061191133827,1.92909220463705,1.64834360321323,1.17759136107518,1.71434626192708,1.4198064492747,1.1921809497366,0.872078499793971,1.88218760830661,1.60767754994185,2.92684756596436,1.8414879800649,1.90125759384206,2.80571135828869,1.42362021749009,1.77308068276014,1.63692417267876,2.63392630016142,2.3148793317737,4.74640098082097,3.04111090979031,1.07435527024149,1.14772999241306,2.20591419119516,1.39120701372253|short_description=p1@Wdr54}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:75659 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9R0D8 | |||
|association_with_transcript=0bp_to_ENSMUST00000146969,ENSMUST00000154625,NM_023790,uc009cmv.2,uc009cmw.2_5end | |||
|cluster_id=chr6:83106347..83106381,- | |||
|description=CAGE_peak_1_at_Wdr54_5end | |||
|id=chr6:83106347..83106381,- | |||
|ontology_enrichment_celltype=CL:0002319!3.65e-17!43;CL:0000221!5.33e-17!44;CL:0000133!5.33e-17!44;CL:0000055!2.40e-16!50;CL:0000540!1.28e-12!33;CL:0000047!1.28e-12!33;CL:0000031!1.28e-12!33;CL:0000404!1.28e-12!33;CL:0000393!1.60e-12!39;CL:0000211!1.60e-12!39;CL:0000117!5.99e-12!23;CL:0000337!5.99e-12!23;CL:0002321!3.75e-07!70;CL:0000220!3.75e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.46e-17,43;CL:0000221,2.15e-17,44;CL:0000133,2.15e-17,44;CL:0000540,6.71e-13,33;CL:0000047,6.71e-13,33;CL:0000031,6.71e-13,33;CL:0000404,6.71e-13,33;CL:0000393,8.42e-13,39;CL:0000211,8.42e-13,39;CL:0000117,3.25e-12,23;CL:0000337,3.25e-12,23;CL:0002321,1.09e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.66e-34!75;UBERON:0001016!4.66e-34!75;UBERON:0001017!1.95e-33!73;UBERON:0005743!1.95e-33!73;UBERON:0004121!7.64e-30!102;UBERON:0000924!7.64e-30!102;UBERON:0006601!7.64e-30!102;UBERON:0002346!5.55e-27!71;UBERON:0003075!5.55e-27!71;UBERON:0007284!5.55e-27!71;UBERON:0000033!6.53e-26!63;UBERON:0001049!1.92e-25!52;UBERON:0005068!1.92e-25!52;UBERON:0006241!1.92e-25!52;UBERON:0007135!1.92e-25!52;UBERON:0000955!5.27e-25!50;UBERON:0006238!5.27e-25!50;UBERON:0002616!1.65e-24!49;UBERON:0003056!1.70e-21!49;UBERON:0003080!2.86e-19!40;UBERON:0002780!1.14e-18!39;UBERON:0001890!1.14e-18!39;UBERON:0006240!1.14e-18!39;UBERON:0002020!9.11e-18!34;UBERON:0002791!1.28e-15!29;UBERON:0003528!1.28e-15!29;UBERON:0001893!1.28e-15!29;UBERON:0000153!1.76e-11!94;UBERON:0000025!1.96e-11!114;UBERON:0000956!2.52e-11!21;UBERON:0001869!2.52e-11!21;UBERON:0000203!2.52e-11!21;UBERON:0004111!3.56e-11!122;UBERON:0007811!1.78e-10!86;UBERON:0002619!1.13e-09!17;UBERON:0003076!9.89e-07!12;UBERON:0003057!9.89e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.82e-35,75;UBERON:0001017,2.96e-34,73;UBERON:0004121,9.12e-31,95;UBERON:0000924,9.12e-31,95;UBERON:0006601,9.12e-31,95;UBERON:0002346,3.06e-29,64;UBERON:0003075,3.06e-29,64;UBERON:0007284,3.06e-29,64;UBERON:0000073,1.45e-27,54;UBERON:0001049,4.69e-26,52;UBERON:0005068,4.69e-26,52;UBERON:0006241,4.69e-26,52;UBERON:0007135,4.69e-26,52;UBERON:0010314,1.22e-25,92;UBERON:0010371,1.94e-24,73;UBERON:0000955,1.54e-23,47;UBERON:0006238,1.54e-23,47;UBERON:0002616,4.86e-23,46;UBERON:0003056,5.23e-22,49;UBERON:0003080,1.01e-19,40;UBERON:0002780,4.17e-19,39;UBERON:0001890,4.17e-19,39;UBERON:0006240,4.17e-19,39;UBERON:0002020,3.51e-18,34;UBERON:0003528,5.58e-16,29;UBERON:0002791,5.58e-16,29;UBERON:0001893,5.58e-16,29;UBERON:0000956,1.42e-11,21;UBERON:0001869,1.42e-11,21;UBERON:0000203,1.42e-11,21;UBERON:0000025,1.87e-10,114;UBERON:0004111,2.50e-10,122;UBERON:0002619,7.01e-10,17;UBERON:0003076,7.28e-07,12;UBERON:0003057,7.28e-07,12 | |||
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| |||
|short_description=p1@Wdr54 | |||
}} |
Revision as of 04:17, 6 August 2015
Short description: | p1@Wdr54 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Wdr54_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_ENSMUST00000146969, ENSMUST00000154625, NM_023790, uc009cmv.2, uc009cmw.2_5end |
EntrezGene: | 75659 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.46e-17 | 43 |
ectodermal cell | 2.15e-17 | 44 |
neurectodermal cell | 2.15e-17 | 44 |
neuron | 6.71e-13 | 33 |
neuronal stem cell | 6.71e-13 | 33 |
neuroblast | 6.71e-13 | 33 |
electrically signaling cell | 6.71e-13 | 33 |
electrically responsive cell | 8.42e-13 | 39 |
electrically active cell | 8.42e-13 | 39 |
CNS neuron (sensu Vertebrata) | 3.25e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.25e-12 | 23 |
embryonic cell | 1.09e-07 | 70 |