FFCP PHASE1:Mm9::chr6:82889553..82889581,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=20355|HGNC=|MCL_coexpression_id=281|UniProt=Q810B2|association_with_transcript=162bp_to_uc012enu.1_5end|description=CAGE_peak_2_at_Sema4f_5end|id=chr6:82889553..82889581,-|ontology_enrichment_celltype=CL:0000540!4.20e-10!33;CL:0000047!4.20e-10!33;CL:0000031!4.20e-10!33;CL:0000404!4.20e-10!33;CL:0000221!1.32e-08!44;CL:0000133!1.32e-08!44;CL:0002319!2.89e-08!43;CL:0000117!1.87e-07!23;CL:0000337!1.87e-07!23;CL:0000393!6.84e-07!39;CL:0000211!6.84e-07!39|ontology_enrichment_celltype_v019_2=CL:0000540,4.26e-11,33;CL:0000047,4.26e-11,33;CL:0000031,4.26e-11,33;CL:0000404,4.26e-11,33;CL:0000117,2.14e-09,23;CL:0000337,2.14e-09,23;CL:0000221,2.33e-09,44;CL:0000133,2.33e-09,44;CL:0002319,7.07e-09,43;CL:0000393,2.91e-08,39;CL:0000211,2.91e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!4.52e-21!75;UBERON:0001016!4.52e-21!75;UBERON:0001017!1.82e-20!73;UBERON:0005743!1.82e-20!73;UBERON:0004121!2.62e-18!102;UBERON:0000924!2.62e-18!102;UBERON:0006601!2.62e-18!102;UBERON:0001049!1.05e-14!52;UBERON:0005068!1.05e-14!52;UBERON:0006241!1.05e-14!52;UBERON:0007135!1.05e-14!52;UBERON:0002346!1.32e-14!71;UBERON:0003075!1.32e-14!71;UBERON:0007284!1.32e-14!71;UBERON:0002616!6.05e-13!49;UBERON:0000955!1.02e-12!50;UBERON:0006238!1.02e-12!50;UBERON:0000033!8.97e-12!63;UBERON:0002020!3.74e-11!34;UBERON:0003080!4.35e-11!40;UBERON:0002780!1.41e-10!39;UBERON:0001890!1.41e-10!39;UBERON:0006240!1.41e-10!39;UBERON:0003056!1.60e-10!49;UBERON:0002791!2.70e-08!29;UBERON:0003528!2.70e-08!29;UBERON:0001893!2.70e-08!29;UBERON:0000153!3.05e-08!94;UBERON:0007811!1.06e-07!86;UBERON:0002021!7.58e-07!10;UBERON:0000411!7.58e-07!10;UBERON:0001950!7.58e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.62e-24,75;UBERON:0001017,7.00e-24,73;UBERON:0000073,1.10e-21,54;UBERON:0004121,1.23e-19,95;UBERON:0000924,1.23e-19,95;UBERON:0006601,1.23e-19,95;UBERON:0001049,4.76e-19,52;UBERON:0005068,4.76e-19,52;UBERON:0006241,4.76e-19,52;UBERON:0007135,4.76e-19,52;UBERON:0002020,1.40e-15,34;UBERON:0002346,1.87e-15,64;UBERON:0003075,1.87e-15,64;UBERON:0007284,1.87e-15,64;UBERON:0002616,3.07e-15,46;UBERON:0000955,1.11e-14,47;UBERON:0006238,1.11e-14,47;UBERON:0010371,1.33e-13,73;UBERON:0003080,3.33e-13,40;UBERON:0002780,1.85e-12,39;UBERON:0001890,1.85e-12,39;UBERON:0006240,1.85e-12,39;UBERON:0003056,2.55e-11,49;UBERON:0003528,3.60e-11,29;UBERON:0002791,3.60e-11,29;UBERON:0001893,3.60e-11,29;UBERON:0002021,5.86e-10,10;UBERON:0000411,5.86e-10,10;UBERON:0001950,5.86e-10,10;UBERON:0010314,2.75e-09,92;UBERON:0000025,9.38e-09,114;UBERON:0002048,5.88e-08,14;UBERON:0000117,5.88e-08,14;UBERON:0000171,5.88e-08,14;UBERON:0000170,5.88e-08,14;UBERON:0005597,5.88e-08,14;UBERON:0000118,5.88e-08,14;UBERON:0004111,8.40e-08,122;UBERON:0002420,1.72e-07,8;UBERON:0007245,1.72e-07,8;UBERON:0010009,1.72e-07,8;UBERON:0010011,1.72e-07,8;UBERON:0000454,1.72e-07,8;UBERON:0011216,4.61e-07,194;UBERON:0005178,8.13e-07,17;UBERON:0005181,8.13e-07,17;UBERON:0002224,8.13e-07,17;UBERON:0000915,8.13e-07,17;UBERON:0008947,8.13e-07,17;UBERON:0003258,8.13e-07,17;UBERON:0003076,9.03e-07,12;UBERON:0003057,9.03e-07,12;UBERON:0002619,9.84e-07,17|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0.234064526321993,0,0,2.9104124088305,2.97229368224591,0.333109761815663,0,0.699561878128147,0.630924330716475,0.411343300817216,0.42438965179803,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,1.45653105909346,0,0,0,0,0,0.219686182734472,0,0.979904951377538,0,0,1.45072428402269,3.36093799142464,0.257259436035947,0.286533439938757,0,1.82084814773638,5.28990979272033,1.26766280701236,0,0.889294796111139,0,0,0,3.59520132622086,0.768436610643109,0.207379224616955,0.270011876663381,0.420649922702764,4.28476476605705,3.3130281142742,0.367472397644862,0,0.919218786610021,2.20231761998777,1.65993539510744,1.84327839907492,3.16527090552465,3.29355516968675,2.08365348222704,2.23346399201105,5.6276261003168,1.5279824777681,3.83017161115768,4.12877874317399,3.91438836233131,0.454357159999104,5.36558076758177,0,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0,0,1.01104889002957,0.34255163915718,2.84831672011889,0.29688427812965,1.04091196059682,1.82679286987285,0.691846491768175,0.60289056221049,1.29347577849275,0,0,0,0.884610551949874,0.485300549842228,0,0,0,18.737971008739,18.6407569063975,0,0,0,0,3.14560342750128,2.74500361691176,1.88481528169297,3.99795936442236,6.13717097592793,2.0778804455956,3.89379031362618,0.509196819251581,0,0,0.210441855886474,0.130120442962704,0.689706313300419,0.360124259610698,0.30140963567143,1.02054748726992,1.2811372028485,0.374806898238915,1.03481348295606,0.646703978798527,0.756424320671277,1.75951124163949,0.43839146485515,0.834141747676794,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.438599962275997,0.439100230582101,0.536825675041487,1.68231958851302,1.9551876352064,0,0,1.2797295032114,0.928946687441754,0.902072229254653,0.403367049246685,0.889512175379481,0.190225626112559,0.474529061544512,0,0.754005626400808,0.795825888164603,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,3.14080423283228,0.568474235311454,0.814824882210129,2.03694102930226,3.52035372432753,1.84256883185997,1.6663054862021,1.56106918286239,2.04925687338048,2.87904096543407,1.75400245523236,3.4411296090305,2.76295970985433,2.31438493730419,0,0,0,0,1.44495530989013,3.7507739709505,0,0.252470927204373,0.631016438832513,0.780877488593277,0.861693590931196,3.10659437338318,7.79795359288379,6.79383673893198,1.21443210502468,2.04579100537918,1.97643888973262,0.321321316421807,0,0.35613120733451,0.651547837414304,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.720244376125241,0.905510786479282,0.857348140126369,0.177340233642274,1.60531935841864,2.30368628842969,2.13125464380219,0,0.21183207086382,0,1.48397627647332,0.161464426695906,0.361877549568935,0.238744688006273,0.492422699235184,0.582961673259701,0.741701208042039,0.170870880797853,0,0.370389054739423,0.188368457004691,0.27338845544205,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.474503990371703,1.21991680276109,0.540026704109006,0.836353184057875,0.655087691238533,0.269728692769641,0.661227645802687,0.26175594198403,0,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0.387479470433193,0.675824501963113,0.352071715937262,0.39061315453185,0.314578033277133,0,0,0.632022241256357,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0,0.721172697119813,0.443068581523732,0.100966449948148,0.381034033274999,0.302478555410522,0.487289403698762,0,0.350630706544707,0.453460767230423,0.221985953374065,0.179427713218951,0,0.19318959403219,0,0,0.857473516316263,0,3.95326289831947,3.68260189205742,1.71868654031819,3.26521046453006,4.11049511862385,9.06472676867641,1.35004500046361,2.70192721934532,4.07828168085784,3.62432218226274,0.103787347584177,0.798049746802062,0.512200817262403,1.45864030240976,0.838452650511929,1.2869045591501,2.22246727801615,0.824140228955577,1.60459604795908,1.26348605881899,1.01391719956096,1.32038438970253,1.03005658216871,1.28050304809739,0.689225627467359,0.952587382566147,0.927074607558844,1.54327376370964,0.412085900803307,0.735994600671987,1.37147700954166,1.4198064492747,2.14592570952589,0.581385666529314,0.752875043322645,0.930760686808441,0.182927972872773,0.526139422875686,1.22223702461276,0,0.830445126869219,1.0835493061312,0.818462086339379,1.23949472948773,1.35034627686799,1.49886346762768,0.233931608445408,1.07435527024149,0.765153328275374,0,0.231867835620421|short_description=p2@Sema4f}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:20355 | |||
|HGNC= | |||
|MCL_coexpression_id=281 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q810B2 | |||
|association_with_transcript=162bp_to_uc012enu.1_5end | |||
|cluster_id=chr6:82889553..82889581,- | |||
|description=CAGE_peak_2_at_Sema4f_5end | |||
|id=chr6:82889553..82889581,- | |||
|ontology_enrichment_celltype=CL:0000540!4.20e-10!33;CL:0000047!4.20e-10!33;CL:0000031!4.20e-10!33;CL:0000404!4.20e-10!33;CL:0000221!1.32e-08!44;CL:0000133!1.32e-08!44;CL:0002319!2.89e-08!43;CL:0000117!1.87e-07!23;CL:0000337!1.87e-07!23;CL:0000393!6.84e-07!39;CL:0000211!6.84e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.26e-11,33;CL:0000047,4.26e-11,33;CL:0000031,4.26e-11,33;CL:0000404,4.26e-11,33;CL:0000117,2.14e-09,23;CL:0000337,2.14e-09,23;CL:0000221,2.33e-09,44;CL:0000133,2.33e-09,44;CL:0002319,7.07e-09,43;CL:0000393,2.91e-08,39;CL:0000211,2.91e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.52e-21!75;UBERON:0001016!4.52e-21!75;UBERON:0001017!1.82e-20!73;UBERON:0005743!1.82e-20!73;UBERON:0004121!2.62e-18!102;UBERON:0000924!2.62e-18!102;UBERON:0006601!2.62e-18!102;UBERON:0001049!1.05e-14!52;UBERON:0005068!1.05e-14!52;UBERON:0006241!1.05e-14!52;UBERON:0007135!1.05e-14!52;UBERON:0002346!1.32e-14!71;UBERON:0003075!1.32e-14!71;UBERON:0007284!1.32e-14!71;UBERON:0002616!6.05e-13!49;UBERON:0000955!1.02e-12!50;UBERON:0006238!1.02e-12!50;UBERON:0000033!8.97e-12!63;UBERON:0002020!3.74e-11!34;UBERON:0003080!4.35e-11!40;UBERON:0002780!1.41e-10!39;UBERON:0001890!1.41e-10!39;UBERON:0006240!1.41e-10!39;UBERON:0003056!1.60e-10!49;UBERON:0002791!2.70e-08!29;UBERON:0003528!2.70e-08!29;UBERON:0001893!2.70e-08!29;UBERON:0000153!3.05e-08!94;UBERON:0007811!1.06e-07!86;UBERON:0002021!7.58e-07!10;UBERON:0000411!7.58e-07!10;UBERON:0001950!7.58e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.62e-24,75;UBERON:0001017,7.00e-24,73;UBERON:0000073,1.10e-21,54;UBERON:0004121,1.23e-19,95;UBERON:0000924,1.23e-19,95;UBERON:0006601,1.23e-19,95;UBERON:0001049,4.76e-19,52;UBERON:0005068,4.76e-19,52;UBERON:0006241,4.76e-19,52;UBERON:0007135,4.76e-19,52;UBERON:0002020,1.40e-15,34;UBERON:0002346,1.87e-15,64;UBERON:0003075,1.87e-15,64;UBERON:0007284,1.87e-15,64;UBERON:0002616,3.07e-15,46;UBERON:0000955,1.11e-14,47;UBERON:0006238,1.11e-14,47;UBERON:0010371,1.33e-13,73;UBERON:0003080,3.33e-13,40;UBERON:0002780,1.85e-12,39;UBERON:0001890,1.85e-12,39;UBERON:0006240,1.85e-12,39;UBERON:0003056,2.55e-11,49;UBERON:0003528,3.60e-11,29;UBERON:0002791,3.60e-11,29;UBERON:0001893,3.60e-11,29;UBERON:0002021,5.86e-10,10;UBERON:0000411,5.86e-10,10;UBERON:0001950,5.86e-10,10;UBERON:0010314,2.75e-09,92;UBERON:0000025,9.38e-09,114;UBERON:0002048,5.88e-08,14;UBERON:0000117,5.88e-08,14;UBERON:0000171,5.88e-08,14;UBERON:0000170,5.88e-08,14;UBERON:0005597,5.88e-08,14;UBERON:0000118,5.88e-08,14;UBERON:0004111,8.40e-08,122;UBERON:0002420,1.72e-07,8;UBERON:0007245,1.72e-07,8;UBERON:0010009,1.72e-07,8;UBERON:0010011,1.72e-07,8;UBERON:0000454,1.72e-07,8;UBERON:0011216,4.61e-07,194;UBERON:0005178,8.13e-07,17;UBERON:0005181,8.13e-07,17;UBERON:0002224,8.13e-07,17;UBERON:0000915,8.13e-07,17;UBERON:0008947,8.13e-07,17;UBERON:0003258,8.13e-07,17;UBERON:0003076,9.03e-07,12;UBERON:0003057,9.03e-07,12;UBERON:0002619,9.84e-07,17 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0.234064526321993,0,0,2.9104124088305,2.97229368224591,0.333109761815663,0,0.699561878128147,0.630924330716475,0.411343300817216,0.42438965179803,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0.7813353445238,1.0470474879476,0.588231488031014,0.683045484958446,1.45653105909346,0,0,0,0,0,0.219686182734472,0,0.979904951377538,0,0,1.45072428402269,3.36093799142464,0.257259436035947,0.286533439938757,0,1.82084814773638,5.28990979272033,1.26766280701236,0,0.889294796111139,0,0,0,3.59520132622086,0.768436610643109,0.207379224616955,0.270011876663381,0.420649922702764,4.28476476605705,3.3130281142742,0.367472397644862,0,0.919218786610021,2.20231761998777,1.65993539510744,1.84327839907492,3.16527090552465,3.29355516968675,2.08365348222704,2.23346399201105,5.6276261003168,1.5279824777681,3.83017161115768,4.12877874317399,3.91438836233131,0.454357159999104,5.36558076758177,0,0,0,0,0,0,0.561777680527007,0,0,0,1.69012103732017,0,0,0,0,0,1.01104889002957,0.34255163915718,2.84831672011889,0.29688427812965,1.04091196059682,1.82679286987285,0.691846491768175,0.60289056221049,1.29347577849275,0,0,0,0.884610551949874,0.485300549842228,0,0,0,18.737971008739,18.6407569063975,0,0,0,0,3.14560342750128,2.74500361691176,1.88481528169297,3.99795936442236,6.13717097592793,2.0778804455956,3.89379031362618,0.509196819251581,0,0,0.210441855886474,0.130120442962704,0.689706313300419,0.360124259610698,0.30140963567143,1.02054748726992,1.2811372028485,0.374806898238915,1.03481348295606,0.646703978798527,0.756424320671277,1.75951124163949,0.43839146485515,0.834141747676794,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0.36012412292203,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0.0810688095458557,0.438599962275997,0.439100230582101,0.536825675041487,1.68231958851302,1.9551876352064,0,0,1.2797295032114,0.928946687441754,0.902072229254653,0.403367049246685,0.889512175379481,0.190225626112559,0.474529061544512,0,0.754005626400808,0.795825888164603,0.58489226135736,0,0,0.199141273254367,0.189667900953082,0.456994050438915,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0.333690211432188,0.196558995113203,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0.179397413521912,0,3.14080423283228,0.568474235311454,0.814824882210129,2.03694102930226,3.52035372432753,1.84256883185997,1.6663054862021,1.56106918286239,2.04925687338048,2.87904096543407,1.75400245523236,3.4411296090305,2.76295970985433,2.31438493730419,0,0,0,0,1.44495530989013,3.7507739709505,0,0.252470927204373,0.631016438832513,0.780877488593277,0.861693590931196,3.10659437338318,7.79795359288379,6.79383673893198,1.21443210502468,2.04579100537918,1.97643888973262,0.321321316421807,0,0.35613120733451,0.651547837414304,0.329940245945071,0,0.485561272309963,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.720244376125241,0.905510786479282,0.857348140126369,0.177340233642274,1.60531935841864,2.30368628842969,2.13125464380219,0,0.21183207086382,0,1.48397627647332,0.161464426695906,0.361877549568935,0.238744688006273,0.492422699235184,0.582961673259701,0.741701208042039,0.170870880797853,0,0.370389054739423,0.188368457004691,0.27338845544205,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0.474503990371703,1.21991680276109,0.540026704109006,0.836353184057875,0.655087691238533,0.269728692769641,0.661227645802687,0.26175594198403,0,0,0.56369293868419,0,0.165458490457098,0.194451188344048,0.387479470433193,0.675824501963113,0.352071715937262,0.39061315453185,0.314578033277133,0,0,0.632022241256357,0.405450430580328,0.205421914329655,0.25984164595559,0.179026695667481,0,0.721172697119813,0.443068581523732,0.100966449948148,0.381034033274999,0.302478555410522,0.487289403698762,0,0.350630706544707,0.453460767230423,0.221985953374065,0.179427713218951,0,0.19318959403219,0,0,0.857473516316263,0,3.95326289831947,3.68260189205742,1.71868654031819,3.26521046453006,4.11049511862385,9.06472676867641,1.35004500046361,2.70192721934532,4.07828168085784,3.62432218226274,0.103787347584177,0.798049746802062,0.512200817262403,1.45864030240976,0.838452650511929,1.2869045591501,2.22246727801615,0.824140228955577,1.60459604795908,1.26348605881899,1.01391719956096,1.32038438970253,1.03005658216871,1.28050304809739,0.689225627467359,0.952587382566147,0.927074607558844,1.54327376370964,0.412085900803307,0.735994600671987,1.37147700954166,1.4198064492747,2.14592570952589,0.581385666529314,0.752875043322645,0.930760686808441,0.182927972872773,0.526139422875686,1.22223702461276,0,0.830445126869219,1.0835493061312,0.818462086339379,1.23949472948773,1.35034627686799,1.49886346762768,0.233931608445408,1.07435527024149,0.765153328275374,0,0.231867835620421 | |||
|short_description=p2@Sema4f | |||
}} |
Revision as of 04:00, 6 August 2015
Short description: | p2@Sema4f |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sema4f_5end |
Coexpression cluster: | MCL_coexpression_mm9:281 |
Association with transcript: | 162bp_to_uc012enu.1_5end |
EntrezGene: | 20355 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.26e-11 | 33 |
neuronal stem cell | 4.26e-11 | 33 |
neuroblast | 4.26e-11 | 33 |
electrically signaling cell | 4.26e-11 | 33 |
CNS neuron (sensu Vertebrata) | 2.14e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.14e-09 | 23 |
ectodermal cell | 2.33e-09 | 44 |
neurectodermal cell | 2.33e-09 | 44 |
neural cell | 7.07e-09 | 43 |
electrically responsive cell | 2.91e-08 | 39 |
electrically active cell | 2.91e-08 | 39 |