FFCP PHASE1:Hg19::chr9:38171671..38171676,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:38171671..38171676,+ | |||
|id=chr9:38171671..38171676,+ | |||
|ontology_enrichment_celltype=CL:0000860!4.05e-09!45;CL:0002057!3.04e-08!42;CL:0002149!4.77e-07!6;CL:0002255!4.77e-07!6;CL:0002194!6.10e-07!63;CL:0000576!6.10e-07!63;CL:0000040!6.10e-07!63;CL:0000559!6.10e-07!63;CL:0002541!7.05e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002149;5.94e-13;6!CL:0002255;5.94e-13;6!CL:0000473;4.12e-08;39!CL:0000234;4.12e-08;39!CL:0000860;5.42e-08;33!CL:0002057;5.42e-08;33!CL:0002541;1.82e-07;3!CL:0000322;1.93e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,5.42e-13,6;CL:0002255,5.42e-13,6;CL:0002541,1.82e-07,3;CL:0000322,1.93e-07,3;CL:0000860,3.48e-07,42;CL:0002057,3.48e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.91e-19;1!UBERON:0005795;3.83e-08;10 | |||
|ontology_enrichment_disease=DOID:3001!4.77e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;5.94e-13;6!DOID:3910;1.57e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.42e-13,6;DOID:3910,1.57e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.17e-07!14;UBERON:0000158!1.17e-07!14;UBERON:0000476!7.05e-07!3;UBERON:0000920!7.05e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;1.57e-10;2!UBERON:0002173;1.57e-10;2!UBERON:0002186;1.57e-10;2!UBERON:0005631;3.25e-08;10!UBERON:0000158;3.25e-08;10!UBERON:0003124;1.82e-07;3!UBERON:0000920;1.82e-07;3!UBERON:0004821;1.93e-07;3!UBERON:0007499;1.93e-07;3!UBERON:0003215;1.93e-07;3!UBERON:0010368;1.93e-07;3!UBERON:0009911;1.93e-07;3!UBERON:0002299;1.93e-07;3!UBERON:0006524;1.93e-07;3!UBERON:0008874;1.93e-07;3!UBERON:0002169;1.93e-07;3!UBERON:0004894;1.93e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,1.57e-10,2;UBERON:0002173,1.57e-10,2;UBERON:0002186,1.57e-10,2;UBERON:0000920,1.82e-07,3;UBERON:0004821,1.93e-07,3;UBERON:0003215,1.93e-07,3;UBERON:0010368,1.93e-07,3;UBERON:0009911,1.93e-07,3;UBERON:0002299,1.93e-07,3;UBERON:0006524,1.93e-07,3;UBERON:0008874,1.93e-07,3;UBERON:0002169,1.93e-07,3;UBERON:0004894,1.93e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,0.28769239232215,0.256160706529101,0,1.72372840368309,3.22742341791913,4.06279459783025,0,0,0,0,0,0,0,0,0,0,0,0,1.00499466102697,0,0.217188844705117,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,1.83665999992011,0,0,6.86484855790469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,7.97502899329799,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,2.55549813004637,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975726071789027,0,0,0,0,0,0,0,0,0.280272163313789,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,2.48165108531456,1.91107787795487,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.653150243690884,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:38171671..38171676,+ | |||
}} |
Revision as of 01:32, 23 January 2014
Short description: | p@chr9:38171671..38171676, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:38171671..38171676, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 5.42e-13 | 6 |
stromal cell of endometrium | 5.42e-13 | 6 |
chorionic membrane mesenchymal stem cell | 1.82e-07 | 3 |
pneumocyte | 1.93e-07 | 3 |
classical monocyte | 3.48e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.48e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 1.57e-10 | 2 |
alveolar duct | 1.57e-10 | 2 |
bronchiole | 1.57e-10 | 2 |
egg chorion | 1.82e-07 | 3 |
pulmonary alveolus epithelium | 1.93e-07 | 3 |
alveolus | 1.93e-07 | 3 |
pulmonary lobule | 1.93e-07 | 3 |
lobule | 1.93e-07 | 3 |
alveolus of lung | 1.93e-07 | 3 |
alveolar system | 1.93e-07 | 3 |
pulmonary acinus | 1.93e-07 | 3 |
alveolar sac | 1.93e-07 | 3 |
alveolar wall | 1.93e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.42e-13 | 6 |
lung adenocarcinoma | 1.57e-10 | 2 |