FFCP PHASE1:Hg19::chr9:35685273..35685313,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C638 | |||
|description=CAGE_peak_at_chr9:35685273..35685313,+ | |||
|id=chr9:35685273..35685313,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.73e-32!180;CL:0000680!1.28e-22!57;CL:0000056!1.28e-22!57;CL:0000355!1.28e-22!57;CL:0000187!9.07e-22!54;CL:0000183!1.58e-21!59;CL:0000393!2.44e-20!60;CL:0000211!2.44e-20!60;CL:0000192!1.46e-18!42;CL:0000514!1.46e-18!42;CL:0000222!4.79e-16!119;CL:0000359!3.29e-15!32;CL:0000057!3.22e-13!75;CL:0002321!1.03e-08!248;CL:0000220!1.06e-08!246 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.77e-16;32!CL:0000192;5.44e-16;43!CL:0000187;8.45e-15;55!CL:0000393;1.16e-11;61!CL:0000211;1.16e-11;61!CL:0002334;8.02e-08;12!CL:0000134;8.15e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.10e-26,58;CL:0000056,3.10e-26,58;CL:0000355,3.10e-26,58;CL:0000187,8.27e-26,55;CL:0000393,1.65e-22,61;CL:0000211,1.65e-22,61;CL:0000192,4.31e-22,43;CL:0000514,4.31e-22,43;CL:0000359,3.01e-17,32;CL:0000222,2.11e-13,121;CL:0000057,3.07e-13,76;CL:0000048,2.25e-09,427;CL:0000723,1.08e-08,433;CL:0002334,2.21e-08,12;CL:0000034,7.76e-08,441 | |||
|ontology_enrichment_development_v019=CL:0000514;5.44e-16;43!CL:0000355;1.04e-13;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.77e-28!83;UBERON:0002329!4.77e-28!83;UBERON:0003077!4.77e-28!83;UBERON:0003059!4.77e-28!83;UBERON:0007282!4.77e-28!83;UBERON:0009618!4.77e-28!83;UBERON:0007285!4.77e-28!83;UBERON:0004290!3.42e-27!70;UBERON:0002385!6.42e-26!63;UBERON:0001015!6.42e-26!63;UBERON:0000383!6.42e-26!63;UBERON:0001134!2.34e-25!61;UBERON:0002036!2.34e-25!61;UBERON:0003082!2.34e-25!61;UBERON:0000486!6.59e-23!82;UBERON:0005256!1.25e-20!143;UBERON:0003104!9.30e-19!238;UBERON:0009142!9.30e-19!238;UBERON:0002100!2.10e-16!216;UBERON:0000481!5.81e-15!347;UBERON:0001637!2.33e-13!42;UBERON:0003509!2.33e-13!42;UBERON:0004572!2.33e-13!42;UBERON:0000490!8.29e-12!138;UBERON:0001981!1.17e-11!60;UBERON:0007500!1.17e-11!60;UBERON:0004537!1.17e-11!60;UBERON:0006965!1.17e-11!60;UBERON:0004872!1.19e-11!84;UBERON:0000926!7.71e-11!448;UBERON:0004120!7.71e-11!448;UBERON:0006603!7.71e-11!448;UBERON:0000475!1.38e-10!365;UBERON:0004573!1.59e-10!33;UBERON:0004571!1.59e-10!33;UBERON:0002049!5.84e-10!79;UBERON:0007798!5.84e-10!79;UBERON:0003914!7.48e-09!118;UBERON:0000468!1.05e-08!659;UBERON:0000055!3.13e-08!69;UBERON:0001009!1.70e-07!113;UBERON:0004535!4.85e-07!110;UBERON:0001135!6.72e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.07e-14;31!UBERON:0001015;5.07e-14;31!UBERON:0000383;5.07e-14;31!UBERON:0004573;1.85e-10;33!UBERON:0004571;1.85e-10;33!UBERON:0001637;7.23e-10;42!UBERON:0003509;7.23e-10;42!UBERON:0004572;7.23e-10;42!UBERON:0001134;1.07e-08;16!UBERON:0002036;1.07e-08;16!UBERON:0002204;3.85e-08;70!UBERON:0001135;3.66e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,9.70e-32,71;UBERON:0003059,9.70e-32,71;UBERON:0007282,9.70e-32,71;UBERON:0004290,9.70e-32,71;UBERON:0009618,9.70e-32,71;UBERON:0007503,1.00e-31,78;UBERON:0007524,1.15e-31,73;UBERON:0003077,5.90e-31,72;UBERON:0007285,5.90e-31,72;UBERON:0002385,7.66e-30,64;UBERON:0001015,7.66e-30,64;UBERON:0000383,7.66e-30,64;UBERON:0001134,9.23e-30,62;UBERON:0002036,9.23e-30,62;UBERON:0003082,9.23e-30,62;UBERON:0000486,6.91e-27,83;UBERON:0005256,6.19e-25,122;UBERON:0003104,1.90e-24,160;UBERON:0009142,1.90e-24,160;UBERON:0000490,9.46e-16,148;UBERON:0002100,6.13e-15,199;UBERON:0001637,1.80e-14,42;UBERON:0003509,1.80e-14,42;UBERON:0004572,1.80e-14,42;UBERON:0000926,2.53e-12,315;UBERON:0004120,2.53e-12,315;UBERON:0006603,2.53e-12,315;UBERON:0004573,7.54e-12,33;UBERON:0004571,7.54e-12,33;UBERON:0007500,3.11e-11,59;UBERON:0001981,3.11e-11,59;UBERON:0004537,3.11e-11,59;UBERON:0006965,3.11e-11,59;UBERON:0004872,9.97e-11,83;UBERON:0003914,4.44e-09,117;UBERON:0000055,1.09e-08,68;UBERON:0002204,1.80e-08,167;UBERON:0002049,2.45e-08,78;UBERON:0007798,2.45e-08,78;UBERON:0001135,3.67e-07,15;UBERON:0001009,6.74e-07,112 | |||
|phase1_expression=3.63356758541113,8.77812147953031,1.69145284915165,33.024188456533,16.9845215882369,18.3191090061077,7.59899634504932,1.26343974685366,0.522371256399677,0.982935746006035,2.79120467188971,0,0.527533956456907,1.11389717664042,5.63375538737457,12.7741777825837,8.43772339233568,10.9546513558106,10.7345215733912,0.61560529038394,1.42800483870977,2.5076377718247,0.286235987131057,1.91624195102038,2.25976751270645,0,0,0,0,0,0,0.919421224478927,0.30120591877825,0.369754010166788,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.53435074212236,3.61439152384566,3.50936537445123,1.73815822752988,0,0.486634870302636,0.378139268656271,3.76939975686359,0.87834785693126,0.523916301990851,0,0,0,0,0,0.238490624305342,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,1.6507082516404,0.417989933073621,0,0,0,0,0,0,0,4.86085168729056,0.0892997282840798,0.898117490504679,0.337834441449967,0,0,0.366403487860815,0,0,0,20.8728219712034,1.39293562831038,1.45650098894541,0.286836620748814,1.77334191099179,2.24271040056923,3.20246987189115,5.18001851676036,0.311211035399766,1.88594940897563,3.75962377160955,0.151357427644931,1.15235184896,0.234321431833797,1.5608003841516,0,1.64393548606981,1.52664848236894,1.94247533241758,0.842704840213491,1.02077085627447,2.08818339430006,0.619954687054593,0,7.41800787835671,0,1.43723628363248,0.336672227908132,0.875829639103749,0.277064115484183,1.31693286264251,15.017901994152,4.20666564938471,1.58805056424029,2.33206526395521,1.49490172172997,1.90738711043606,1.80054657650641,0.515262646192195,2.57640540045629,2.04728541964749,0.337552664482532,1.85130309806277,2.52433774244115,0.920498986422993,0.484938170456436,2.4850671476163,1.10827308050404,1.3564847384839,0,0.272746120590835,0,0.365921118388786,0.132529768321485,0.348581828608555,0.310983165046111,0.756962552626885,0,3.12899064659632,10.935095949279,6.90674606762403,6.96551892047969,5.77503585335668,1.53798840051797,0.674338760312407,1.20505514941741,2.31617342738027,0.871517776369625,0.949082476444386,1.8876383142423,0.784885860501384,0.38474715694639,0,7.01208869017229,1.6462960453256,11.7606969108434,0,0,0,0,0,0.514703430895577,0.219500570817251,0,0,0.185176890317059,0,1.03993478527958,2.88662684050547,0,1.05667824812239,0,0,0,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.716468181622786,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0.1466765716419,2.97324946242889,3.57656445851882,0,3.98907174877306,9.36066932202295,0.771622122786426,8.5109479213967,1.3321108950805,1.14382394926518,0.542621605391443,1.64648067356154,1.30294473717494,1.42156779497018,4.75171123760058,3.01439377059586,0.871533458600294,2.69927076191554,0,0,0,2.87549826589899,6.89171615004683,2.85273810081437,2.46128221334885,5.95881335396112,0.537182889719687,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0.36807447515742,3.00102312635806,6.23909554509392,42.8419974753463,22.8389105660367,21.9206356897169,21.3197375286738,1.80567659836631,0,2.0694614258501,1.99267679560631,4.42486004500088,0.955719759148911,0,4.46086450954113,0,0,0,0,0,0,1.98486246255021,1.99500565274481,12.3490441550552,1.79394808957981,2.04682899626681,6.59501076688791,7.42090332224955,3.85524234506639,3.01854933032316,1.88892458831761,2.59627214591811,12.7831416305955,0,1.20303882181971,0.184161977871793,1.60740227430449,6.91946438425525,1.57349297951309,0,0,0,0,0,1.13733384070897,0.340187410553031,1.51141141271498,0,1.08378575017541,1.50506932156456,0.254876273045038,1.66215201785745,0.671624264166535,0,0,0.769350375349168,0,0,0.103041011647722,1.09883357782012,0.742585499285292,0,0,3.21367859688319,0.96670718292122,5.39170159901255,5.67963596486679,3.58375088459779,1.39646318328756,4.93056759308377,1.61930592090592,6.76643470915204,0.165284915360978,0,0,0,1.39453664789186,1.5740617341532,2.0911118104818,3.38836938193698,1.59691809095107,0.869932992075073,5.74505079222152,6.29749501664761,0.744316738719335,0.316379424718726,6.1001662055624,1.27948895655667,1.71175595213568,1.59101623962968,13.3441268833869,2.69808686374972,4.66712950551293,1.41374882814824,4.24583211303964,26.9467545994114,12.2164952309305,2.43816869544795,4.14312932373184,17.9605249486484,3.27599787379166,6.6460553018245,3.39024349860728,2.2054613741845,8.62470667813585,9.20746859032902,2.31510213706675,2.62357900818653,6.89895281673194,7.74558745249375,9.29595488356397,1.00387946542836,2.45622602532803,3.5667105148125,1.06428319221179,2.74439925886963,3.29294892959902,0.75894634753143,1.74967360122491,0.192444225451024,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,1.06824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.242721043499027,0,1.70481688083848,0,0.296964680832639,0,0,0,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| |||
|short_description=p@chr9:35685273..35685313,+ | |||
}} |
Revision as of 01:23, 23 January 2014
Short description: | p@chr9:35685273..35685313, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_at_chr9:35685273..35685313, + |
Coexpression cluster: | C638_skeletal_tongue_Adipocyte_diaphragm_penis_throat_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.10e-26 | 58 |
myoblast | 3.10e-26 | 58 |
multi-potent skeletal muscle stem cell | 3.10e-26 | 58 |
muscle cell | 8.27e-26 | 55 |
electrically responsive cell | 1.65e-22 | 61 |
electrically active cell | 1.65e-22 | 61 |
smooth muscle cell | 4.31e-22 | 43 |
smooth muscle myoblast | 4.31e-22 | 43 |
vascular associated smooth muscle cell | 3.01e-17 | 32 |
mesodermal cell | 2.11e-13 | 121 |
fibroblast | 3.07e-13 | 76 |
multi fate stem cell | 2.25e-09 | 427 |
somatic stem cell | 1.08e-08 | 433 |
preadipocyte | 2.21e-08 | 12 |
stem cell | 7.76e-08 | 441 |